RNA–Protein interactions for RNA: ENST00000640499.1

VEGFA-231, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VEGFA, Length 1,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-231ENST00000640499 CSF2RBP32927 897 aa26.15■■□□□ 1.78
VEGFA-231ENST00000640499 ZFP36L1Q07352 338 aaKnown RBP26.15■■□□□ 1.78
VEGFA-231ENST00000640499 SQSTM1Q13501 440 aa26.15■■□□□ 1.78
VEGFA-231ENST00000640499 RPE65Q16518 533 aa26.15■■□□□ 1.78
VEGFA-231ENST00000640499 CASC4Q6P4E1 433 aa26.15■■□□□ 1.78
VEGFA-231ENST00000640499 IGDCC3Q8IVU1 814 aa26.15■■□□□ 1.78
VEGFA-231ENST00000640499 ATXN7L3BQ96GX2 97 aa26.15■■□□□ 1.78
VEGFA-231ENST00000640499 INSM2Q96T92 566 aaPredicted RBP26.15■■□□□ 1.78
VEGFA-231ENST00000640499 NUDT22Q9BRQ3 303 aa26.15■■□□□ 1.78
VEGFA-231ENST00000640499 TBC1D10AQ9BXI6 508 aa26.15■■□□□ 1.78
VEGFA-231ENST00000640499 FOXP3Q9BZS1 431 aa26.15■■□□□ 1.78
VEGFA-231ENST00000640499 TRIM31Q9BZY9 425 aa26.15■■□□□ 1.78
VEGFA-231ENST00000640499 WWP1Q9H0M0 922 aa26.15■■□□□ 1.78
VEGFA-231ENST00000640499 SLC40A1Q9NP59 571 aa26.15■■□□□ 1.78
VEGFA-231ENST00000640499 PMS2P1A4D2B8 440 aa26.14■■□□□ 1.78
VEGFA-231ENST00000640499 RAD51CO43502 376 aa26.14■■□□□ 1.78
VEGFA-231ENST00000640499 SEC31AO94979 1220 aaKnown RBP26.14■■□□□ 1.78
VEGFA-231ENST00000640499 POLBP06746 335 aa26.14■■□□□ 1.78
VEGFA-231ENST00000640499 RPL21P46778 160 aaKnown RBP26.14■■□□□ 1.78
VEGFA-231ENST00000640499 ITGA8P53708 1063 aa26.14■■□□□ 1.78
VEGFA-231ENST00000640499 DHX9Q08211 1270 aaKnown RBP26.14■■□□□ 1.78
VEGFA-231ENST00000640499 CAPRIN2Q6IMN6 1127 aaKnown RBP26.14■■□□□ 1.78
VEGFA-231ENST00000640499 SLITRK4Q8IW52 837 aa26.14■■□□□ 1.78
VEGFA-231ENST00000640499 GPR150Q8NGU9 434 aa26.14■■□□□ 1.78
VEGFA-231ENST00000640499 HM13Q8TCT9 377 aa26.14■■□□□ 1.78
VEGFA-231ENST00000640499 TBRG4Q969Z0 631 aaKnown RBP eCLIP26.14■■□□□ 1.787e-6■■■■■ 27.5
VEGFA-231ENST00000640499 RMDN2Q96LZ7 410 aa26.14■■□□□ 1.78
VEGFA-231ENST00000640499 SLC38A3Q99624 504 aa26.14■■□□□ 1.78
VEGFA-231ENST00000640499 WDR83Q9BRX9 315 aaKnown RBP26.14■■□□□ 1.78
VEGFA-231ENST00000640499 COG4Q9H9E3 785 aa26.14■■□□□ 1.78
VEGFA-231ENST00000640499 PLAC1Q9HBJ0 212 aa26.14■■□□□ 1.78
VEGFA-231ENST00000640499 KCNK4Q9NYG8 393 aa26.14■■□□□ 1.78
VEGFA-231ENST00000640499 CDC23Q9UJX2 597 aa26.14■■□□□ 1.78
VEGFA-231ENST00000640499 SNX24Q9Y343 169 aa26.14■■□□□ 1.78
VEGFA-231ENST00000640499 KLHL33A6NCF5 533 aa26.13■■□□□ 1.77
VEGFA-231ENST00000640499 PDHA2P29803 388 aa26.13■■□□□ 1.77
VEGFA-231ENST00000640499 BIRC2Q13490 618 aa26.13■■□□□ 1.77
VEGFA-231ENST00000640499 MORF4L2Q15014 288 aa26.13■■□□□ 1.77
VEGFA-231ENST00000640499 LKAAEAR1Q8TD35 194 aa26.13■■□□□ 1.77
VEGFA-231ENST00000640499 ZNF669Q96BR6 464 aaPredicted RBP26.13■■□□□ 1.77
VEGFA-231ENST00000640499 P2RY12Q9H244 342 aa26.13■■□□□ 1.77
VEGFA-231ENST00000640499 SEMA6CQ9H3T2 930 aa26.13■■□□□ 1.77
VEGFA-231ENST00000640499 UCK1Q9HA47 277 aa26.13■■□□□ 1.77
VEGFA-231ENST00000640499 ACSL5Q9ULC5 683 aa26.13■■□□□ 1.77
VEGFA-231ENST00000640499 CFAP20Q9Y6A4 193 aaKnown RBP26.13■■□□□ 1.77
VEGFA-231ENST00000640499 RPS6KL1Q9Y6S9 549 aa26.13■■□□□ 1.77
VEGFA-231ENST00000640499 IGF2RP11717 2491 aa26.13■■□□□ 1.77
VEGFA-231ENST00000640499 RTP5Q14D33 572 aa26.12■■□□□ 1.77
VEGFA-231ENST00000640499 DUS1LQ6P1R4 473 aaKnown RBP26.12■■□□□ 1.77
VEGFA-231ENST00000640499 NAPRTQ6XQN6 538 aa26.12■■□□□ 1.77
VEGFA-231ENST00000640499 TMEM26Q6ZUK4 368 aa26.12■■□□□ 1.77
VEGFA-231ENST00000640499 NRSN2Q9GZP1 204 aa26.12■■□□□ 1.77
VEGFA-231ENST00000640499 OR52A5Q9H2C5 316 aa26.12■■□□□ 1.77
VEGFA-231ENST00000640499 POT1Q9NUX5 634 aa26.12■■□□□ 1.77
VEGFA-231ENST00000640499 OGFRQ9NZT2 677 aa26.12■■□□□ 1.77
VEGFA-231ENST00000640499 TMEM9Q9P0T7 183 aa26.12■■□□□ 1.77
VEGFA-231ENST00000640499 SAMD15Q9P1V8 674 aa26.12■■□□□ 1.77
VEGFA-231ENST00000640499 FAM187AA6NFU0 413 aa26.11■■□□□ 1.77
VEGFA-231ENST00000640499 IQCF5A8MTL0 148 aa26.11■■□□□ 1.77
VEGFA-231ENST00000640499 EFCAB8A8MWE9 144 aa26.11■■□□□ 1.77
VEGFA-231ENST00000640499 URI1O94763 535 aaPredicted RBP26.11■■□□□ 1.77
VEGFA-231ENST00000640499 USP1O94782 785 aa26.11■■□□□ 1.77
VEGFA-231ENST00000640499 CPNE6O95741 557 aa26.11■■□□□ 1.77
VEGFA-231ENST00000640499 VIPP01282 170 aa26.11■■□□□ 1.77
VEGFA-231ENST00000640499 F7P08709 466 aaPredicted RBP26.11■■□□□ 1.77
VEGFA-231ENST00000640499 PREPP48147 710 aa26.11■■□□□ 1.77
VEGFA-231ENST00000640499 TYSND1Q2T9J0 566 aa26.11■■□□□ 1.77
VEGFA-231ENST00000640499 CENPUQ71F23 418 aa26.11■■□□□ 1.77
VEGFA-231ENST00000640499 UNC5BQ8IZJ1 945 aa26.11■■□□□ 1.77
VEGFA-231ENST00000640499 MDM1Q8TC05 714 aa26.11■■□□□ 1.77
VEGFA-231ENST00000640499 SH3KBP1Q96B97 665 aa26.11■■□□□ 1.77
VEGFA-231ENST00000640499 STAMBPL1Q96FJ0 436 aa26.11■■□□□ 1.77
VEGFA-231ENST00000640499 SNF8Q96H20 258 aa26.11■■□□□ 1.77
VEGFA-231ENST00000640499 PRR11Q96HE9 360 aaPredicted RBP26.11■■□□□ 1.77
VEGFA-231ENST00000640499 MAD1L1Q9Y6D9 718 aa26.11■■□□□ 1.77
VEGFA-231ENST00000640499 LILRA5A6NI73 299 aa26.1■■□□□ 1.77
VEGFA-231ENST00000640499 PROS1P07225 676 aa26.1■■□□□ 1.77
VEGFA-231ENST00000640499 MTHFD1P11586 935 aaKnown RBP26.1■■□□□ 1.77
VEGFA-231ENST00000640499 CCKBRP32239 447 aa26.1■■□□□ 1.77
VEGFA-231ENST00000640499 HALP42357 657 aa26.1■■□□□ 1.77
VEGFA-231ENST00000640499 TTPAP49638 278 aa26.1■■□□□ 1.77
VEGFA-231ENST00000640499 CYP4F3Q08477 520 aa26.1■■□□□ 1.77
VEGFA-231ENST00000640499 GPR18Q14330 331 aa26.1■■□□□ 1.77
VEGFA-231ENST00000640499 ZNF789Q5FWF6 425 aa26.1■■□□□ 1.77
VEGFA-231ENST00000640499 AARS2Q5JTZ9 985 aaKnown RBP26.1■■□□□ 1.77
VEGFA-231ENST00000640499 NEPROQ6NW34 567 aa26.1■■□□□ 1.77
VEGFA-231ENST00000640499 ZNF592Q92610 1267 aa26.1■■□□□ 1.77
VEGFA-231ENST00000640499 CXorf40BQ96DE9 158 aa26.1■■□□□ 1.77
VEGFA-231ENST00000640499 TTC1Q99614 292 aa26.1■■□□□ 1.77
VEGFA-231ENST00000640499 EBNA1BP2Q99848 306 aaKnown RBP26.1■■□□□ 1.77
VEGFA-231ENST00000640499 ERP44Q9BS26 406 aa26.1■■□□□ 1.77
VEGFA-231ENST00000640499 ANAPC5Q9UJX4 755 aa26.1■■□□□ 1.77
VEGFA-231ENST00000640499 FAM169AQ9Y6X4 670 aa26.1■■□□□ 1.77
VEGFA-231ENST00000640499 MAP1BP46821 2468 aaKnown RBP26.09■■□□□ 1.77
VEGFA-231ENST00000640499 SLC5A10A0PJK1 596 aa26.09■■□□□ 1.77
VEGFA-231ENST00000640499 TAF4O00268 1085 aa26.09■■□□□ 1.77
VEGFA-231ENST00000640499 CCR7P32248 378 aa26.09■■□□□ 1.77
VEGFA-231ENST00000640499 EPHA4P54764 986 aa26.09■■□□□ 1.77
VEGFA-231ENST00000640499 INHBCP55103 352 aa26.09■■□□□ 1.77
VEGFA-231ENST00000640499 GPLD1P80108 840 aa26.09■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms