RNA–Protein interactions for RNA: ENST00000640306.1

HNRNPU-228, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 2,917 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-228ENST00000640306 KANSL1LA0AUZ9 987 aa16.32■□□□□ 0.2
HNRNPU-228ENST00000640306 C2orf81A6NN90 581 aa16.32■□□□□ 0.2
HNRNPU-228ENST00000640306 PTGES3LE9PB15 166 aa16.32■□□□□ 0.2
HNRNPU-228ENST00000640306 F5H5T6 163 aa16.32■□□□□ 0.2
HNRNPU-228ENST00000640306 PRLP01236 227 aa16.32■□□□□ 0.2
HNRNPU-228ENST00000640306 THRBP10828 461 aa16.32■□□□□ 0.2
HNRNPU-228ENST00000640306 SLC2A4P14672 509 aa16.32■□□□□ 0.2
HNRNPU-228ENST00000640306 HOXB8P17481 243 aaPredicted RBP16.32■□□□□ 0.2
HNRNPU-228ENST00000640306 CCNA2P20248 432 aa16.32■□□□□ 0.2
HNRNPU-228ENST00000640306 PIGAP37287 484 aa16.32■□□□□ 0.2
HNRNPU-228ENST00000640306 MLLT10P55197 1068 aa16.32■□□□□ 0.2
HNRNPU-228ENST00000640306 RPL38P63173 70 aaKnown RBP16.32■□□□□ 0.2
HNRNPU-228ENST00000640306 TRIM32Q13049 653 aa16.32■□□□□ 0.2
HNRNPU-228ENST00000640306 ACBD5Q5T8D3 534 aaPredicted RBP16.32■□□□□ 0.2
HNRNPU-228ENST00000640306 FAM117BQ6P1L5 589 aa16.32■□□□□ 0.2
HNRNPU-228ENST00000640306 OR4F6Q8NGB9 312 aa16.32■□□□□ 0.2
HNRNPU-228ENST00000640306 BPIFB1Q8TDL5 484 aa16.32■□□□□ 0.2
HNRNPU-228ENST00000640306 IKZF5Q9H5V7 419 aa16.32■□□□□ 0.2
HNRNPU-228ENST00000640306 PDFQ9HBH1 243 aa16.32■□□□□ 0.2
HNRNPU-228ENST00000640306 COL4A4P53420 1690 aaPredicted RBP16.31■□□□□ 0.2
HNRNPU-228ENST00000640306 DRGXA6NNA5 263 aa16.31■□□□□ 0.2
HNRNPU-228ENST00000640306 GNGT2O14610 69 aa16.31■□□□□ 0.2
HNRNPU-228ENST00000640306 GSTA4O15217 222 aa16.31■□□□□ 0.2
HNRNPU-228ENST00000640306 XYLBO75191 536 aa16.31■□□□□ 0.2
HNRNPU-228ENST00000640306 ATP6V1G1O75348 118 aa16.31■□□□□ 0.2
HNRNPU-228ENST00000640306 AGXTP21549 392 aa16.31■□□□□ 0.2
HNRNPU-228ENST00000640306 HMGCS1Q01581 520 aa16.31■□□□□ 0.2
HNRNPU-228ENST00000640306 CHRNB3Q05901 458 aa16.31■□□□□ 0.2
HNRNPU-228ENST00000640306 DAG1Q14118 895 aa16.31■□□□□ 0.2
HNRNPU-228ENST00000640306 GTDC1Q4AE62 458 aa16.31■□□□□ 0.2
HNRNPU-228ENST00000640306 PDCD4Q53EL6 469 aaKnown RBP16.31■□□□□ 0.2
HNRNPU-228ENST00000640306 FAM171A1Q5VUB5 890 aa16.31■□□□□ 0.2
HNRNPU-228ENST00000640306 SPESP1Q6UW49 350 aa16.31■□□□□ 0.2
HNRNPU-228ENST00000640306 NKAPQ8N5F7 415 aaKnown RBP16.31■□□□□ 0.2
HNRNPU-228ENST00000640306 SLC15A4Q8N697 577 aa16.31■□□□□ 0.2
HNRNPU-228ENST00000640306 PAPD5Q8NDF8 572 aaKnown RBP16.31■□□□□ 0.2
HNRNPU-228ENST00000640306 CCDC90BQ9GZT6 254 aa16.31■□□□□ 0.2
HNRNPU-228ENST00000640306 NACA2Q9H009 215 aa16.31■□□□□ 0.2
HNRNPU-228ENST00000640306 FARSBQ9NSD9 589 aaKnown RBP16.31■□□□□ 0.2
HNRNPU-228ENST00000640306 UBA2Q9UBT2 640 aaPredicted RBP16.31■□□□□ 0.2
HNRNPU-228ENST00000640306 NIPSNAP3AQ9UFN0 247 aaPredicted RBP16.31■□□□□ 0.2
HNRNPU-228ENST00000640306 CDH7Q9ULB5 785 aa16.31■□□□□ 0.2
HNRNPU-228ENST00000640306 GABRQQ9UN88 632 aa16.31■□□□□ 0.2
HNRNPU-228ENST00000640306 PCDHGA8Q9Y5G5 932 aa16.31■□□□□ 0.2
HNRNPU-228ENST00000640306 DEAF1O75398 565 aaPredicted RBP16.31■□□□□ 0.2
HNRNPU-228ENST00000640306 UMPSP11172 480 aa16.31■□□□□ 0.2
HNRNPU-228ENST00000640306 CDH1P12830 882 aa16.31■□□□□ 0.2
HNRNPU-228ENST00000640306 GLB1LQ6UWU2 654 aa16.31■□□□□ 0.2
HNRNPU-228ENST00000640306 RIMKLAQ8IXN7 391 aa16.31■□□□□ 0.2
HNRNPU-228ENST00000640306 PHACTR4Q8IZ21 702 aa16.31■□□□□ 0.2
HNRNPU-228ENST00000640306 GOLM1Q8NBJ4 401 aa16.31■□□□□ 0.2
HNRNPU-228ENST00000640306 BHMTQ93088 406 aa16.31■□□□□ 0.2
HNRNPU-228ENST00000640306 ITFG2Q969R8 447 aa16.31■□□□□ 0.2
HNRNPU-228ENST00000640306 APOL5Q9BWW9 433 aa16.31■□□□□ 0.2
HNRNPU-228ENST00000640306 NUSAP1Q9BXS6 441 aaKnown RBP16.31■□□□□ 0.2
HNRNPU-228ENST00000640306 SCUBE2Q9NQ36 999 aa16.31■□□□□ 0.2
HNRNPU-228ENST00000640306 AASSQ9UDR5 926 aa16.31■□□□□ 0.2
HNRNPU-228ENST00000640306 STX7O15400 261 aaKnown RBP16.3■□□□□ 0.2
HNRNPU-228ENST00000640306 ZSCAN9O15535 394 aaPredicted RBP16.3■□□□□ 0.2
HNRNPU-228ENST00000640306 DUSP11O75319 330 aaKnown RBP16.3■□□□□ 0.2
HNRNPU-228ENST00000640306 ALPLP05186 524 aa16.3■□□□□ 0.2
HNRNPU-228ENST00000640306 ANXA6P08133 673 aa16.3■□□□□ 0.2
HNRNPU-228ENST00000640306 HSPA7P48741 367 aa16.3■□□□□ 0.2
HNRNPU-228ENST00000640306 ALDH3A2P51648 485 aa16.3■□□□□ 0.2
HNRNPU-228ENST00000640306 SGSHP51688 502 aa16.3■□□□□ 0.2
HNRNPU-228ENST00000640306 DSC3Q14574 896 aa16.3■□□□□ 0.2
HNRNPU-228ENST00000640306 LAPTM4AQ15012 233 aa16.3■□□□□ 0.2
HNRNPU-228ENST00000640306 NFE2Q16621 373 aaPredicted RBP16.3■□□□□ 0.2
HNRNPU-228ENST00000640306 FAM98BQ52LJ0 330 aaKnown RBP16.3■□□□□ 0.2
HNRNPU-228ENST00000640306 ZNF773Q6PK81 442 aa16.3■□□□□ 0.2
HNRNPU-228ENST00000640306 MILR1Q7Z6M3 343 aa16.3■□□□□ 0.2
HNRNPU-228ENST00000640306 PROSER1Q86XN7 944 aa16.3■□□□□ 0.2
HNRNPU-228ENST00000640306 ZNF420Q8TAQ5 688 aaPredicted RBP16.3■□□□□ 0.2
HNRNPU-228ENST00000640306 SLC22A17Q8WUG5 538 aa16.3■□□□□ 0.2
HNRNPU-228ENST00000640306 ISG20Q96AZ6 181 aaKnown RBP16.3■□□□□ 0.2
HNRNPU-228ENST00000640306 MTFMTQ96DP5 389 aaKnown RBP16.3■□□□□ 0.2
HNRNPU-228ENST00000640306 CSF3RQ99062 836 aa16.3■□□□□ 0.2
HNRNPU-228ENST00000640306 NSUN3Q9H649 340 aaKnown RBP16.3■□□□□ 0.2
HNRNPU-228ENST00000640306 TLR8Q9NR97 1041 aaKnown RBP16.3■□□□□ 0.2
HNRNPU-228ENST00000640306 ZIM2Q9NZV7 527 aa16.3■□□□□ 0.2
HNRNPU-228ENST00000640306 ZNHIT2Q9UHR6 403 aa16.3■□□□□ 0.2
HNRNPU-228ENST00000640306 NT5C1B-RDH14C9J2C7 533 aa16.3■□□□□ 0.2
HNRNPU-228ENST00000640306 ZNF701M0R085 212 aaPredicted RBP16.3■□□□□ 0.2
HNRNPU-228ENST00000640306 STX16O14662 325 aa16.3■□□□□ 0.2
HNRNPU-228ENST00000640306 INSIG1O15503 277 aa16.3■□□□□ 0.2
HNRNPU-228ENST00000640306 GMNNO75496 209 aa16.3■□□□□ 0.2
HNRNPU-228ENST00000640306 PRAMEF12O95522 483 aa16.3■□□□□ 0.2
HNRNPU-228ENST00000640306 CST1P01037 141 aa16.3■□□□□ 0.2
HNRNPU-228ENST00000640306 EPOP01588 193 aa16.3■□□□□ 0.2
HNRNPU-228ENST00000640306 ASGR1P07306 291 aa16.3■□□□□ 0.2
HNRNPU-228ENST00000640306 YBEYP58557 167 aaPredicted RBP16.3■□□□□ 0.2
HNRNPU-228ENST00000640306 TWF1Q12792 350 aa16.3■□□□□ 0.2
HNRNPU-228ENST00000640306 CLLU1OSQ5K130 101 aa16.3■□□□□ 0.2
HNRNPU-228ENST00000640306 PIWIL3Q7Z3Z3 882 aaKnown RBP16.3■□□□□ 0.2
HNRNPU-228ENST00000640306 ZDHHC13Q8IUH4 622 aa16.3■□□□□ 0.2
HNRNPU-228ENST00000640306 DENND1CQ8IV53 801 aa16.3■□□□□ 0.2
HNRNPU-228ENST00000640306 DDHD1Q8NEL9 900 aa16.3■□□□□ 0.2
HNRNPU-228ENST00000640306 OR13F1Q8NGS4 319 aa16.3■□□□□ 0.2
HNRNPU-228ENST00000640306 BORCS5Q969J3 196 aa16.3■□□□□ 0.2
HNRNPU-228ENST00000640306 AURKBQ96GD4 344 aaPredicted RBP16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms