RNA–Protein interactions for RNA: ENST00000639856.1

TRIM3-215, Transcript of tripartite motif containing 3, humanhuman

TSL 5 BASIC

Gene TRIM3, Length 2,137 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-215ENST00000639856 LINGO3P0C6S8 592 aa14.88□□□□□ -0.03
TRIM3-215ENST00000639856 UROSP10746 265 aa14.88□□□□□ -0.03
TRIM3-215ENST00000639856 PRDX3P30048 256 aaKnown RBP14.88□□□□□ -0.03
TRIM3-215ENST00000639856 TRAP1Q12931 704 aaKnown RBP14.88□□□□□ -0.03
TRIM3-215ENST00000639856 DMC1Q14565 340 aa14.88□□□□□ -0.03
TRIM3-215ENST00000639856 TGFBIQ15582 683 aa14.88□□□□□ -0.03
TRIM3-215ENST00000639856 OGFOD2Q6N063 350 aa14.88□□□□□ -0.03
TRIM3-215ENST00000639856 LAYNQ6UX15 382 aa14.88□□□□□ -0.03
TRIM3-215ENST00000639856 EFL1Q7Z2Z2 1120 aaKnown RBP14.88□□□□□ -0.03
TRIM3-215ENST00000639856 APLFQ8IW19 511 aaPredicted RBP14.88□□□□□ -0.03
TRIM3-215ENST00000639856 ICA1LQ8NDH6 482 aa14.88□□□□□ -0.03
TRIM3-215ENST00000639856 OR56A4Q8NGH8 313 aa14.88□□□□□ -0.03
TRIM3-215ENST00000639856 BTBD9Q96Q07 612 aa14.88□□□□□ -0.03
TRIM3-215ENST00000639856 TUBGCP5Q96RT8 1024 aa14.88□□□□□ -0.03
TRIM3-215ENST00000639856 CIPCQ9C0C6 399 aa14.88□□□□□ -0.03
TRIM3-215ENST00000639856 SLC28A3Q9HAS3 691 aa14.88□□□□□ -0.03
TRIM3-215ENST00000639856 ZNF225Q9UK10 706 aa14.88□□□□□ -0.03
TRIM3-215ENST00000639856 NDUFAF1Q9Y375 327 aa14.88□□□□□ -0.03
TRIM3-215ENST00000639856 DTNAQ9Y4J8 743 aa14.88□□□□□ -0.03
TRIM3-215ENST00000639856 DOCK8Q8NF50 2099 aa14.88□□□□□ -0.03
TRIM3-215ENST00000639856 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.87□□□□□ -0.03
TRIM3-215ENST00000639856 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.87□□□□□ -0.03
TRIM3-215ENST00000639856 NR5A2O00482 541 aa14.87□□□□□ -0.03
TRIM3-215ENST00000639856 PAPLNO95428 1278 aa14.87□□□□□ -0.03
TRIM3-215ENST00000639856 PRAMEF1O95521 474 aa14.87□□□□□ -0.03
TRIM3-215ENST00000639856 POP4O95707 220 aaKnown RBP14.87□□□□□ -0.03
TRIM3-215ENST00000639856 CHEK2O96017 543 aa14.87□□□□□ -0.03
TRIM3-215ENST00000639856 CISD3P0C7P0 127 aa14.87□□□□□ -0.03
TRIM3-215ENST00000639856 UBTFL6P0CB48 400 aaPredicted RBP14.87□□□□□ -0.03
TRIM3-215ENST00000639856 PRR35P0CG20 571 aa14.87□□□□□ -0.03
TRIM3-215ENST00000639856 IDO1P14902 403 aa14.87□□□□□ -0.03
TRIM3-215ENST00000639856 ZNF7P17097 686 aaPredicted RBP14.87□□□□□ -0.03
TRIM3-215ENST00000639856 DGKGP49619 791 aa14.87□□□□□ -0.03
TRIM3-215ENST00000639856 MED21Q13503 144 aa14.87□□□□□ -0.03
TRIM3-215ENST00000639856 SAMD4BQ5PRF9 694 aaKnown RBP14.87□□□□□ -0.03
TRIM3-215ENST00000639856 OR52E8Q6IFG1 317 aa14.87□□□□□ -0.03
TRIM3-215ENST00000639856 CRTC1Q6UUV9 634 aa14.87□□□□□ -0.03
TRIM3-215ENST00000639856 RETREG3Q86VR2 466 aa14.87□□□□□ -0.03
TRIM3-215ENST00000639856 SERPINA9Q86WD7 417 aa14.87□□□□□ -0.03
TRIM3-215ENST00000639856 ZNF366Q8N895 744 aa14.87□□□□□ -0.03
TRIM3-215ENST00000639856 ZNF557Q8N988 423 aaPredicted RBP14.87□□□□□ -0.03
TRIM3-215ENST00000639856 BPIFB1Q8TDL5 484 aa14.87□□□□□ -0.03
TRIM3-215ENST00000639856 FRS2Q8WU20 508 aa14.87□□□□□ -0.03
TRIM3-215ENST00000639856 SMARCD2Q92925 531 aa14.87□□□□□ -0.03
TRIM3-215ENST00000639856 SLC2A11Q9BYW1 496 aa14.87□□□□□ -0.03
TRIM3-215ENST00000639856 CPEB1Q9BZB8 566 aaKnown RBP14.87□□□□□ -0.03
TRIM3-215ENST00000639856 PCDHAC1Q9H158 963 aa14.87□□□□□ -0.03
TRIM3-215ENST00000639856 COPS7BQ9H9Q2 264 aaPredicted RBP14.87□□□□□ -0.03
TRIM3-215ENST00000639856 MSRAQ9UJ68 235 aa14.87□□□□□ -0.03
TRIM3-215ENST00000639856 FBXO10Q9UK96 956 aa14.87□□□□□ -0.03
TRIM3-215ENST00000639856 GIPC1O14908 333 aa14.87□□□□□ -0.03
TRIM3-215ENST00000639856 C8BP07358 591 aa14.87□□□□□ -0.03
TRIM3-215ENST00000639856 BPIP17213 487 aa14.87□□□□□ -0.03
TRIM3-215ENST00000639856 VCLP18206 1134 aa14.87□□□□□ -0.03
TRIM3-215ENST00000639856 LHCGRP22888 699 aa14.87□□□□□ -0.03
TRIM3-215ENST00000639856 RPS3P23396 243 aaKnown RBP eCLIP14.87□□□□□ -0.03
TRIM3-215ENST00000639856 NME5P56597 212 aa14.87□□□□□ -0.03
TRIM3-215ENST00000639856 RALGDSQ12967 914 aa14.87□□□□□ -0.03
TRIM3-215ENST00000639856 RPS6KA2Q15349 733 aa14.87□□□□□ -0.03
TRIM3-215ENST00000639856 RBBP7Q16576 425 aa14.87□□□□□ -0.03
TRIM3-215ENST00000639856 PTRHD1Q6GMV3 140 aaKnown RBP14.87□□□□□ -0.03
TRIM3-215ENST00000639856 SPATA19Q7Z5L4 167 aa14.87□□□□□ -0.03
TRIM3-215ENST00000639856 LILRA2Q8N149 483 aa14.87□□□□□ -0.03
TRIM3-215ENST00000639856 CATSPER1Q8NEC5 780 aa14.87□□□□□ -0.03
TRIM3-215ENST00000639856 ESAMQ96AP7 390 aa14.87□□□□□ -0.03
TRIM3-215ENST00000639856 DCUN1D1Q96GG9 259 aa14.87□□□□□ -0.03
TRIM3-215ENST00000639856 PLEKHG4BQ96PX9 1271 aa14.87□□□□□ -0.03
TRIM3-215ENST00000639856 CLPBQ9H078 707 aa14.87□□□□□ -0.03
TRIM3-215ENST00000639856 LMAN2LQ9H0V9 348 aa14.87□□□□□ -0.03
TRIM3-215ENST00000639856 IL26Q9NPH9 171 aa14.87□□□□□ -0.03
TRIM3-215ENST00000639856 PFDN4Q9NQP4 134 aa14.87□□□□□ -0.03
TRIM3-215ENST00000639856 NUDT4Q9NZJ9 180 aa14.87□□□□□ -0.03
TRIM3-215ENST00000639856 MAP10Q9P2G4 905 aa14.87□□□□□ -0.03
TRIM3-215ENST00000639856 EIF2B4Q9UI10 523 aaKnown RBP14.87□□□□□ -0.03
TRIM3-215ENST00000639856 APPL1Q9UKG1 709 aa14.87□□□□□ -0.03
TRIM3-215ENST00000639856 ASB1Q9Y576 335 aa14.87□□□□□ -0.03
TRIM3-215ENST00000639856 HEPACAM2A8MVW5 462 aa14.86□□□□□ -0.03
TRIM3-215ENST00000639856 RNASEH1O60930 286 aaKnown RBP14.86□□□□□ -0.03
TRIM3-215ENST00000639856 TULP3O75386 442 aa14.86□□□□□ -0.03
TRIM3-215ENST00000639856 ADH1CP00326 375 aa14.86□□□□□ -0.03
TRIM3-215ENST00000639856 CAPN3P20807 821 aa14.86□□□□□ -0.03
TRIM3-215ENST00000639856 SLC6A11P48066 632 aa14.86□□□□□ -0.03
TRIM3-215ENST00000639856 RHDQ02161 417 aa14.86□□□□□ -0.03
TRIM3-215ENST00000639856 NFATC2Q13469 925 aa14.86□□□□□ -0.03
TRIM3-215ENST00000639856 XKR7Q5GH72 579 aa14.86□□□□□ -0.03
TRIM3-215ENST00000639856 LRRC66Q68CR7 880 aa14.86□□□□□ -0.03
TRIM3-215ENST00000639856 GPRIN3Q6ZVF9 776 aa14.86□□□□□ -0.03
TRIM3-215ENST00000639856 SNX20Q7Z614 316 aa14.86□□□□□ -0.03
TRIM3-215ENST00000639856 ADAMTSL2Q86TH1 951 aa14.86□□□□□ -0.03
TRIM3-215ENST00000639856 TICAM1Q8IUC6 712 aa14.86□□□□□ -0.03
TRIM3-215ENST00000639856 RBFAQ8N0V3 343 aa14.86□□□□□ -0.03
TRIM3-215ENST00000639856 ZNF382Q96SR6 550 aa14.86□□□□□ -0.03
TRIM3-215ENST00000639856 GPATCH1Q9BRR8 931 aaKnown RBP14.86□□□□□ -0.03
TRIM3-215ENST00000639856 SLC39A3Q9BRY0 314 aa14.86□□□□□ -0.03
TRIM3-215ENST00000639856 ASB8Q9H765 288 aa14.86□□□□□ -0.03
TRIM3-215ENST00000639856 SPATS2LQ9NUQ6 558 aaKnown RBP14.86□□□□□ -0.03
TRIM3-215ENST00000639856 GPR45Q9Y5Y3 372 aa14.86□□□□□ -0.03
TRIM3-215ENST00000639856 HOXC11O43248 304 aaPredicted RBP14.86□□□□□ -0.03
TRIM3-215ENST00000639856 CAPNS1P04632 268 aa14.86□□□□□ -0.03
TRIM3-215ENST00000639856 UGT1A6P19224 532 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms