RNA–Protein interactions for RNA: ENST00000639300.1

SCARB2-216, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-216ENST00000639300 XAGE5Q8WWM1 108 aa14.23□□□□□ -0.13
SCARB2-216ENST00000639300 PKP2Q99959 881 aa14.23□□□□□ -0.13
SCARB2-216ENST00000639300 C1orf109Q9NX04 203 aa14.23□□□□□ -0.13
SCARB2-216ENST00000639300 SAMD4AQ9UPU9 718 aaKnown RBP14.23□□□□□ -0.13
SCARB2-216ENST00000639300 hCG_2039718K7EN88 272 aa14.23□□□□□ -0.13
SCARB2-216ENST00000639300 PTGESO14684 152 aa14.23□□□□□ -0.13
SCARB2-216ENST00000639300 NSG1P42857 185 aa14.23□□□□□ -0.13
SCARB2-216ENST00000639300 GATMP50440 423 aa14.23□□□□□ -0.13
SCARB2-216ENST00000639300 C17orf64Q86WR6 236 aa14.23□□□□□ -0.13
SCARB2-216ENST00000639300 ARMC8Q8IUR7 673 aa14.23□□□□□ -0.13
SCARB2-216ENST00000639300 OR10T2Q8NGX3 314 aa14.23□□□□□ -0.13
SCARB2-216ENST00000639300 OR8D1Q8WZ84 308 aa14.23□□□□□ -0.13
SCARB2-216ENST00000639300 PLD4Q96BZ4 506 aa14.23□□□□□ -0.13
SCARB2-216ENST00000639300 PLGRKTQ9HBL7 147 aa14.23□□□□□ -0.13
SCARB2-216ENST00000639300 ZNF510Q9Y2H8 683 aa14.23□□□□□ -0.13
SCARB2-216ENST00000639300 CAB39Q9Y376 341 aaPredicted RBP14.23□□□□□ -0.13
SCARB2-216ENST00000639300 TRIM43BA6NCK2 446 aa14.23□□□□□ -0.13
SCARB2-216ENST00000639300 DCLK1O15075 740 aa14.23□□□□□ -0.13
SCARB2-216ENST00000639300 ATG13O75143 517 aa14.23□□□□□ -0.13
SCARB2-216ENST00000639300 MFN2O95140 757 aa14.23□□□□□ -0.13
SCARB2-216ENST00000639300 MAGP20916 626 aa14.23□□□□□ -0.13
SCARB2-216ENST00000639300 SLC7A1P30825 629 aa14.23□□□□□ -0.13
SCARB2-216ENST00000639300 CASP9P55211 416 aa14.23□□□□□ -0.13
SCARB2-216ENST00000639300 RPS14P62263 151 aaKnown RBP14.23□□□□□ -0.13
SCARB2-216ENST00000639300 ERVK-8P63133 956 aa14.23□□□□□ -0.13
SCARB2-216ENST00000639300 LPIN1Q14693 890 aa14.23□□□□□ -0.13
SCARB2-216ENST00000639300 PPP1R3AQ16821 1122 aa14.23□□□□□ -0.13
SCARB2-216ENST00000639300 PDZK1Q5T2W1 519 aa14.23□□□□□ -0.13
SCARB2-216ENST00000639300 DPP10Q8N608 796 aa14.23□□□□□ -0.13
SCARB2-216ENST00000639300 ZNF366Q8N895 744 aa14.23□□□□□ -0.13
SCARB2-216ENST00000639300 PSMA8Q8TAA3 256 aa14.23□□□□□ -0.13
SCARB2-216ENST00000639300 LRRC58Q96CX6 371 aa14.23□□□□□ -0.13
SCARB2-216ENST00000639300 RAPGEFL1Q9UHV5 662 aa14.23□□□□□ -0.13
SCARB2-216ENST00000639300 ATP6V1HQ9UI12 483 aa14.23□□□□□ -0.13
SCARB2-216ENST00000639300 OAZ3Q9UMX2 235 aa14.23□□□□□ -0.13
SCARB2-216ENST00000639300 Q9Y3F1 56 aa14.23□□□□□ -0.13
SCARB2-216ENST00000639300 DGKBQ9Y6T7 804 aa14.23□□□□□ -0.13
SCARB2-216ENST00000639300 GPR32O75388 356 aa14.22□□□□□ -0.13
SCARB2-216ENST00000639300 IGFBP5P24593 272 aa14.22□□□□□ -0.13
SCARB2-216ENST00000639300 SSR2P43308 183 aa14.22□□□□□ -0.13
SCARB2-216ENST00000639300 SLC11A1P49279 550 aa14.22□□□□□ -0.13
SCARB2-216ENST00000639300 CDH15P55291 814 aa14.22□□□□□ -0.13
SCARB2-216ENST00000639300 TLE2Q04725 743 aa14.22□□□□□ -0.13
SCARB2-216ENST00000639300 SFSWAPQ12872 951 aaKnown RBP14.22□□□□□ -0.13
SCARB2-216ENST00000639300 MED22Q15528 200 aa14.22□□□□□ -0.13
SCARB2-216ENST00000639300 R3HCC1LQ7Z5L2 792 aaKnown RBP14.22□□□□□ -0.13
SCARB2-216ENST00000639300 C19orf18Q8NEA5 215 aa14.22□□□□□ -0.13
SCARB2-216ENST00000639300 GIPC3Q8TF64 312 aa14.22□□□□□ -0.13
SCARB2-216ENST00000639300 MCMBPQ9BTE3 642 aa14.22□□□□□ -0.13
SCARB2-216ENST00000639300 ZBTB26Q9HCK0 441 aa14.22□□□□□ -0.13
SCARB2-216ENST00000639300 KRCC1Q9NPI7 259 aaPredicted RBP14.22□□□□□ -0.13
SCARB2-216ENST00000639300 TRBV23OR9-2A0A075B6M9 112 aa14.22□□□□□ -0.13
SCARB2-216ENST00000639300 ILVBLA1L0T0 632 aa14.22□□□□□ -0.13
SCARB2-216ENST00000639300 SCAMP1O15126 338 aa14.22□□□□□ -0.13
SCARB2-216ENST00000639300 GUCY1B2O75343 617 aa14.22□□□□□ -0.13
SCARB2-216ENST00000639300 BUD31P41223 144 aaPredicted RBP14.22□□□□□ -0.13
SCARB2-216ENST00000639300 KRR1Q13601 381 aaKnown RBP14.22□□□□□ -0.13
SCARB2-216ENST00000639300 UPP1Q16831 310 aa14.22□□□□□ -0.13
SCARB2-216ENST00000639300 RGS21Q2M5E4 152 aa14.22□□□□□ -0.13
SCARB2-216ENST00000639300 CCDC92Q53HC0 331 aaPredicted RBP14.22□□□□□ -0.13
SCARB2-216ENST00000639300 TMEM135Q86UB9 458 aa14.22□□□□□ -0.13
SCARB2-216ENST00000639300 WDR36Q8NI36 951 aaKnown RBP14.22□□□□□ -0.13
SCARB2-216ENST00000639300 MIPEPQ99797 713 aa14.22□□□□□ -0.13
SCARB2-216ENST00000639300 KLHL1Q9NR64 748 aa14.22□□□□□ -0.13
SCARB2-216ENST00000639300 MAP4K5Q9Y4K4 846 aa14.22□□□□□ -0.13
SCARB2-216ENST00000639300 YIPF1Q9Y548 306 aa14.22□□□□□ -0.13
SCARB2-216ENST00000639300 PIPSLA2A3N6 862 aa14.22□□□□□ -0.13
SCARB2-216ENST00000639300 NOBOXO60393 691 aa14.22□□□□□ -0.13
SCARB2-216ENST00000639300 ACRP10323 421 aa14.22□□□□□ -0.13
SCARB2-216ENST00000639300 TALDO1P37837 337 aa14.22□□□□□ -0.13
SCARB2-216ENST00000639300 ANXA8L1Q5VT79 327 aa14.22□□□□□ -0.13
SCARB2-216ENST00000639300 KIAA1324Q6UXG2 1013 aaKnown RBP14.22□□□□□ -0.13
SCARB2-216ENST00000639300 ZNF598Q86UK7 904 aaKnown RBP14.22□□□□□ -0.13
SCARB2-216ENST00000639300 VANGL1Q8TAA9 524 aaPredicted RBP14.22□□□□□ -0.13
SCARB2-216ENST00000639300 ASB9Q96DX5 294 aa14.22□□□□□ -0.13
SCARB2-216ENST00000639300 ZBED3Q96IU2 234 aaPredicted RBP14.22□□□□□ -0.13
SCARB2-216ENST00000639300 NUSAP1Q9BXS6 441 aaKnown RBP14.22□□□□□ -0.13
SCARB2-216ENST00000639300 TOR4AQ9NXH8 423 aa14.22□□□□□ -0.13
SCARB2-216ENST00000639300 GABRQQ9UN88 632 aa14.22□□□□□ -0.13
SCARB2-216ENST00000639300 MYH14Q7Z406 1995 aaKnown RBP14.22□□□□□ -0.13
SCARB2-216ENST00000639300 PNMA8CA0A1B0GUJ8 204 aa14.22□□□□□ -0.13
SCARB2-216ENST00000639300 K7EPI3 171 aa14.22□□□□□ -0.13
SCARB2-216ENST00000639300 EFCAB14O75071 495 aa14.22□□□□□ -0.13
SCARB2-216ENST00000639300 IL6P05231 212 aa14.22□□□□□ -0.13
SCARB2-216ENST00000639300 ITGA2P17301 1181 aa14.22□□□□□ -0.13
SCARB2-216ENST00000639300 GPR17Q13304 367 aa14.22□□□□□ -0.13
SCARB2-216ENST00000639300 CHRNA6Q15825 494 aa14.22□□□□□ -0.13
SCARB2-216ENST00000639300 SFT2D3Q587I9 215 aa14.22□□□□□ -0.13
SCARB2-216ENST00000639300 RABL3Q5HYI8 236 aa14.22□□□□□ -0.13
SCARB2-216ENST00000639300 TMEM220Q6QAJ8 160 aa14.22□□□□□ -0.13
SCARB2-216ENST00000639300 FAM124AQ86V42 546 aa14.22□□□□□ -0.13
SCARB2-216ENST00000639300 TMEM74Q96NL1 305 aa14.22□□□□□ -0.13
SCARB2-216ENST00000639300 FERD3LQ96RJ6 166 aa14.22□□□□□ -0.13
SCARB2-216ENST00000639300 FAIM2Q9BWQ8 316 aa14.22□□□□□ -0.13
SCARB2-216ENST00000639300 TPK1Q9H3S4 243 aa14.22□□□□□ -0.13
SCARB2-216ENST00000639300 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.22□□□□□ -0.13
SCARB2-216ENST00000639300 NENFQ9UMX5 172 aa14.22□□□□□ -0.13
SCARB2-216ENST00000639300 MTMR11A4FU01 709 aa14.21□□□□□ -0.13
SCARB2-216ENST00000639300 ZNF487B1APH4 448 aa14.21□□□□□ -0.13
SCARB2-216ENST00000639300 KERAO60938 352 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms