RNA–Protein interactions for RNA: ENST00000638794.1

SMN2-216, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 846 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-216ENST00000638794 KLHL35Q6PF15 583 aa16.49■□□□□ 0.23
SMN2-216ENST00000638794 DET1Q7L5Y6 550 aa16.49■□□□□ 0.23
SMN2-216ENST00000638794 SIDT2Q8NBJ9 832 aaKnown RBP16.49■□□□□ 0.23
SMN2-216ENST00000638794 NAT14Q8WUY8 206 aa16.49■□□□□ 0.23
SMN2-216ENST00000638794 UBXN4Q92575 508 aa16.49■□□□□ 0.23
SMN2-216ENST00000638794 KRT35Q92764 455 aa16.49■□□□□ 0.23
SMN2-216ENST00000638794 SLC41A2Q96JW4 573 aa16.49■□□□□ 0.23
SMN2-216ENST00000638794 GORASP1Q9BQQ3 440 aa16.49■□□□□ 0.23
SMN2-216ENST00000638794 FICDQ9BVA6 458 aa16.49■□□□□ 0.23
SMN2-216ENST00000638794 HEMGNQ9BXL5 484 aa16.49■□□□□ 0.23
SMN2-216ENST00000638794 GBA3Q9H227 469 aa16.49■□□□□ 0.23
SMN2-216ENST00000638794 PDE7BQ9NP56 450 aa16.49■□□□□ 0.23
SMN2-216ENST00000638794 IMP3Q9NV31 184 aaKnown RBP16.49■□□□□ 0.23
SMN2-216ENST00000638794 KCND3Q9UK17 655 aa16.49■□□□□ 0.23
SMN2-216ENST00000638794 PADI1Q9ULC6 663 aa16.49■□□□□ 0.23
SMN2-216ENST00000638794 ARL5AQ9Y689 179 aa16.49■□□□□ 0.23
SMN2-216ENST00000638794 LRRK2Q5S007 2527 aa16.48■□□□□ 0.23
SMN2-216ENST00000638794 MTHFD1P11586 935 aaKnown RBP16.48■□□□□ 0.23
SMN2-216ENST00000638794 FOLR1P15328 257 aa16.48■□□□□ 0.23
SMN2-216ENST00000638794 MSH3P20585 1137 aa16.48■□□□□ 0.23
SMN2-216ENST00000638794 RBL1P28749 1068 aa16.48■□□□□ 0.23
SMN2-216ENST00000638794 XRCC4Q13426 336 aa16.48■□□□□ 0.23
SMN2-216ENST00000638794 DNASE1L3Q13609 305 aa16.48■□□□□ 0.23
SMN2-216ENST00000638794 LONRF2Q1L5Z9 754 aa16.48■□□□□ 0.23
SMN2-216ENST00000638794 SKOR2Q2VWA4 1001 aaPredicted RBP16.48■□□□□ 0.23
SMN2-216ENST00000638794 COLEC12Q5KU26 742 aa16.48■□□□□ 0.23
SMN2-216ENST00000638794 PWWP2BQ6NUJ5 590 aa16.48■□□□□ 0.23
SMN2-216ENST00000638794 C11orf63Q6NUN7 778 aa16.48■□□□□ 0.23
SMN2-216ENST00000638794 DUS1LQ6P1R4 473 aaKnown RBP16.48■□□□□ 0.23
SMN2-216ENST00000638794 CERS6Q6ZMG9 384 aa16.48■□□□□ 0.23
SMN2-216ENST00000638794 BBS12Q6ZW61 710 aa16.48■□□□□ 0.23
SMN2-216ENST00000638794 TMEM135Q86UB9 458 aa16.48■□□□□ 0.23
SMN2-216ENST00000638794 TC2NQ8N9U0 490 aa16.48■□□□□ 0.23
SMN2-216ENST00000638794 ZNF398Q8TD17 642 aa16.48■□□□□ 0.23
SMN2-216ENST00000638794 CT55Q8WUE5 264 aa16.48■□□□□ 0.23
SMN2-216ENST00000638794 RBM41Q96IZ5 413 aaKnown RBP16.48■□□□□ 0.23
SMN2-216ENST00000638794 ZNF514Q96K75 400 aaPredicted RBP16.48■□□□□ 0.23
SMN2-216ENST00000638794 MAP3K3Q99759 626 aa16.48■□□□□ 0.23
SMN2-216ENST00000638794 WWP1Q9H0M0 922 aa16.48■□□□□ 0.23
SMN2-216ENST00000638794 LHX9Q9NQ69 397 aa16.48■□□□□ 0.23
SMN2-216ENST00000638794 FAM8A1Q9UBU6 413 aa16.48■□□□□ 0.23
SMN2-216ENST00000638794 RARRES3Q9UL19 164 aa16.48■□□□□ 0.23
SMN2-216ENST00000638794 TP53TG5Q9Y2B4 290 aa16.48■□□□□ 0.23
SMN2-216ENST00000638794 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.48■□□□□ 0.23
SMN2-216ENST00000638794 PCDHGA6Q9Y5G7 932 aa16.48■□□□□ 0.23
SMN2-216ENST00000638794 CDC14CA4D256 554 aa16.47■□□□□ 0.23
SMN2-216ENST00000638794 OR5K3A6NET4 321 aa16.47■□□□□ 0.23
SMN2-216ENST00000638794 H7C0C1 242 aa16.47■□□□□ 0.23
SMN2-216ENST00000638794 APOC4-APOC2K7ER74 178 aa16.47■□□□□ 0.23
SMN2-216ENST00000638794 LCA5LO95447 670 aa16.47■□□□□ 0.23
SMN2-216ENST00000638794 APOC2P02655 101 aa16.47■□□□□ 0.23
SMN2-216ENST00000638794 MT-ND3P03897 115 aa16.47■□□□□ 0.23
SMN2-216ENST00000638794 EBLN1P0CF75 366 aa16.47■□□□□ 0.23
SMN2-216ENST00000638794 NR1D1P20393 614 aa16.47■□□□□ 0.23
SMN2-216ENST00000638794 ATP5OP48047 213 aa16.47■□□□□ 0.23
SMN2-216ENST00000638794 GEMP55040 296 aa16.47■□□□□ 0.23
SMN2-216ENST00000638794 FOXK1P85037 733 aa16.47■□□□□ 0.23
SMN2-216ENST00000638794 OLIG2Q13516 323 aa16.47■□□□□ 0.23
SMN2-216ENST00000638794 IGFBP7Q16270 282 aa16.47■□□□□ 0.23
SMN2-216ENST00000638794 DNTTIP2Q5QJE6 756 aaKnown RBP16.47■□□□□ 0.23
SMN2-216ENST00000638794 OR4K2Q8NGD2 314 aa16.47■□□□□ 0.23
SMN2-216ENST00000638794 C12orf66Q96MD2 445 aa16.47■□□□□ 0.23
SMN2-216ENST00000638794 INSM2Q96T92 566 aaPredicted RBP16.47■□□□□ 0.23
SMN2-216ENST00000638794 FKBPLQ9UIM3 349 aa16.47■□□□□ 0.23
SMN2-216ENST00000638794 POLHQ9Y253 713 aa16.47■□□□□ 0.23
SMN2-216ENST00000638794 PIPSLA2A3N6 862 aa16.46■□□□□ 0.23
SMN2-216ENST00000638794 MGAT4DA6NG13 374 aa16.46■□□□□ 0.23
SMN2-216ENST00000638794 TLCD2A6NGC4 264 aa16.46■□□□□ 0.23
SMN2-216ENST00000638794 K7EM74 188 aa16.46■□□□□ 0.23
SMN2-216ENST00000638794 CREG1O75629 220 aa16.46■□□□□ 0.23
SMN2-216ENST00000638794 ANXA9O76027 345 aa16.46■□□□□ 0.23
SMN2-216ENST00000638794 SRP72O76094 671 aaKnown RBP16.46■□□□□ 0.23
SMN2-216ENST00000638794 LPOP22079 712 aaPredicted RBP16.46■□□□□ 0.23
SMN2-216ENST00000638794 ACY1Q03154 408 aa16.46■□□□□ 0.23
SMN2-216ENST00000638794 TAF1AQ15573 450 aaPredicted RBP16.46■□□□□ 0.23
SMN2-216ENST00000638794 CCDC181Q5TID7 509 aa16.46■□□□□ 0.23
SMN2-216ENST00000638794 ITPRIPL1Q6GPH6 555 aa16.46■□□□□ 0.23
SMN2-216ENST00000638794 RANBP10Q6VN20 620 aa16.46■□□□□ 0.23
SMN2-216ENST00000638794 KMT5CQ86Y97 462 aa16.46■□□□□ 0.23
SMN2-216ENST00000638794 SPDYE1Q8NFV5 336 aaPredicted RBP16.46■□□□□ 0.23
SMN2-216ENST00000638794 OR2L2Q8NH16 312 aa16.46■□□□□ 0.23
SMN2-216ENST00000638794 ACTL9Q8TC94 416 aa16.46■□□□□ 0.23
SMN2-216ENST00000638794 FCRL4Q96PJ5 515 aa16.46■□□□□ 0.23
SMN2-216ENST00000638794 RUFY1Q96T51 708 aa16.46■□□□□ 0.23
SMN2-216ENST00000638794 CD180Q99467 661 aa16.46■□□□□ 0.23
SMN2-216ENST00000638794 APOL2Q9BQE5 337 aa16.46■□□□□ 0.23
SMN2-216ENST00000638794 TWSG1Q9GZX9 223 aa16.46■□□□□ 0.23
SMN2-216ENST00000638794 ASB8Q9H765 288 aa16.46■□□□□ 0.23
SMN2-216ENST00000638794 AKIRIN1Q9H9L7 192 aaPredicted RBP16.46■□□□□ 0.23
SMN2-216ENST00000638794 FGF21Q9NSA1 209 aa16.46■□□□□ 0.23
SMN2-216ENST00000638794 HRASLS2Q9NWW9 162 aa16.46■□□□□ 0.23
SMN2-216ENST00000638794 ACSL5Q9ULC5 683 aa16.46■□□□□ 0.23
SMN2-216ENST00000638794 PCDHA13Q9Y5I0 950 aa16.46■□□□□ 0.23
SMN2-216ENST00000638794 UBA6A0AVT1 1052 aaPredicted RBP16.45■□□□□ 0.22
SMN2-216ENST00000638794 MACROD2A1Z1Q3 448 aa16.45■□□□□ 0.22
SMN2-216ENST00000638794 C2orf81A6NN90 581 aa16.45■□□□□ 0.22
SMN2-216ENST00000638794 C21orf140B9A014 251 aa16.45■□□□□ 0.22
SMN2-216ENST00000638794 SGTAO43765 313 aa16.45■□□□□ 0.22
SMN2-216ENST00000638794 NTRK1P04629 796 aa16.45■□□□□ 0.22
SMN2-216ENST00000638794 SLC35G4P0C7Q5 338 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms