RNA–Protein interactions for RNA: ENST00000638372.1

SCARB2-208, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,811 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-208ENST00000638372 DBTP11182 482 aaKnown RBP14.18□□□□□ -0.14
SCARB2-208ENST00000638372 MAT2AP31153 395 aaKnown RBP14.18□□□□□ -0.14
SCARB2-208ENST00000638372 HERVK_113P63132 956 aa14.18□□□□□ -0.14
SCARB2-208ENST00000638372 CREB5Q02930 508 aa14.18□□□□□ -0.14
SCARB2-208ENST00000638372 TMEM214Q6NUQ4 689 aaKnown RBP14.18□□□□□ -0.14
SCARB2-208ENST00000638372 TRIB2Q92519 343 aa14.18□□□□□ -0.14
SCARB2-208ENST00000638372 ERVK-6Q9BXR3 956 aa14.18□□□□□ -0.14
SCARB2-208ENST00000638372 MRPS26Q9BYN8 205 aaKnown RBP14.18□□□□□ -0.14
SCARB2-208ENST00000638372 TRIM43BA6NCK2 446 aa14.17□□□□□ -0.14
SCARB2-208ENST00000638372 UNCXA6NJT0 531 aa14.17□□□□□ -0.14
SCARB2-208ENST00000638372 CDC7O00311 574 aa14.17□□□□□ -0.14
SCARB2-208ENST00000638372 SLC31A1O15431 190 aa14.17□□□□□ -0.14
SCARB2-208ENST00000638372 ADARP55265 1226 aaKnown RBP14.17□□□□□ -0.14
SCARB2-208ENST00000638372 ACTR3P61158 418 aa14.17□□□□□ -0.14
SCARB2-208ENST00000638372 ZNF252P-AS1Q0IIN9 211 aa14.17□□□□□ -0.14
SCARB2-208ENST00000638372 RFTN1Q14699 578 aaPredicted RBP14.17□□□□□ -0.14
SCARB2-208ENST00000638372 RSBN1Q5VWQ0 802 aaPredicted RBP14.17□□□□□ -0.14
SCARB2-208ENST00000638372 FRMD7Q6ZUT3 714 aa14.17□□□□□ -0.14
SCARB2-208ENST00000638372 FGD2Q7Z6J4 655 aa14.17□□□□□ -0.14
SCARB2-208ENST00000638372 TP53INP2Q8IXH6 220 aa14.17□□□□□ -0.14
SCARB2-208ENST00000638372 REM2Q8IYK8 340 aaPredicted RBP14.17□□□□□ -0.14
SCARB2-208ENST00000638372 BEND7Q8N7W2 519 aaPredicted RBP14.17□□□□□ -0.14
SCARB2-208ENST00000638372 C19orf18Q8NEA5 215 aa14.17□□□□□ -0.14
SCARB2-208ENST00000638372 OR9I1Q8NGQ6 314 aa14.17□□□□□ -0.14
SCARB2-208ENST00000638372 VANGL1Q8TAA9 524 aaPredicted RBP14.17□□□□□ -0.14
SCARB2-208ENST00000638372 TDRD1Q9BXT4 1180 aaKnown RBP14.17□□□□□ -0.14
SCARB2-208ENST00000638372 RSPH9Q9H1X1 276 aaPredicted RBP14.17□□□□□ -0.14
SCARB2-208ENST00000638372 TFB2MQ9H5Q4 396 aaKnown RBP14.17□□□□□ -0.14
SCARB2-208ENST00000638372 EBF2Q9HAK2 575 aa14.17□□□□□ -0.14
SCARB2-208ENST00000638372 OR10H1Q9Y4A9 318 aa14.17□□□□□ -0.14
SCARB2-208ENST00000638372 A0A0D9SEW6 157 aa14.17□□□□□ -0.14
SCARB2-208ENST00000638372 EFCAB10A6NFE3 127 aa14.17□□□□□ -0.14
SCARB2-208ENST00000638372 SERPINB7O75635 380 aa14.17□□□□□ -0.14
SCARB2-208ENST00000638372 PCCBP05166 539 aa14.17□□□□□ -0.14
SCARB2-208ENST00000638372 PPIBP23284 216 aaKnown RBP14.17□□□□□ -0.14
SCARB2-208ENST00000638372 PRDX6P30041 224 aa14.17□□□□□ -0.14
SCARB2-208ENST00000638372 AQP4P55087 323 aa14.17□□□□□ -0.14
SCARB2-208ENST00000638372 COPZ1P61923 177 aa14.17□□□□□ -0.14
SCARB2-208ENST00000638372 UPP1Q16831 310 aa14.17□□□□□ -0.14
SCARB2-208ENST00000638372 RNF19BQ6ZMZ0 732 aa14.17□□□□□ -0.14
SCARB2-208ENST00000638372 CDHR3Q6ZTQ4 885 aa14.17□□□□□ -0.14
SCARB2-208ENST00000638372 KLK6Q92876 244 aa14.17□□□□□ -0.14
SCARB2-208ENST00000638372 SUV39H2Q9H5I1 410 aa14.17□□□□□ -0.14
SCARB2-208ENST00000638372 SAMD4AQ9UPU9 718 aaKnown RBP14.17□□□□□ -0.14
SCARB2-208ENST00000638372 MAP4K5Q9Y4K4 846 aa14.17□□□□□ -0.14
SCARB2-208ENST00000638372 NUMA1Q14980 2115 aa14.17□□□□□ -0.14
SCARB2-208ENST00000638372 TYROBPO43914 113 aa14.17□□□□□ -0.14
SCARB2-208ENST00000638372 ECI2O75521 394 aa14.17□□□□□ -0.14
SCARB2-208ENST00000638372 IL6P05231 212 aa14.17□□□□□ -0.14
SCARB2-208ENST00000638372 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP14.17□□□□□ -0.14
SCARB2-208ENST00000638372 CHST15Q7LFX5 561 aaPredicted RBP14.17□□□□□ -0.14
SCARB2-208ENST00000638372 ZNF655Q8N720 491 aaPredicted RBP14.17□□□□□ -0.14
SCARB2-208ENST00000638372 OR52J3Q8NH60 311 aa14.17□□□□□ -0.14
SCARB2-208ENST00000638372 ARHGAP39Q9C0H5 1083 aa14.17□□□□□ -0.14
SCARB2-208ENST00000638372 MCM8Q9UJA3 840 aa14.17□□□□□ -0.14
SCARB2-208ENST00000638372 FGF19O95750 216 aa14.17□□□□□ -0.14
SCARB2-208ENST00000638372 APODP05090 189 aa14.17□□□□□ -0.14
SCARB2-208ENST00000638372 XRCC1P18887 633 aaPredicted RBP14.17□□□□□ -0.14
SCARB2-208ENST00000638372 CCR10P46092 362 aa14.17□□□□□ -0.14
SCARB2-208ENST00000638372 SIX1Q15475 284 aaPredicted RBP14.17□□□□□ -0.14
SCARB2-208ENST00000638372 PDZK1Q5T2W1 519 aa14.17□□□□□ -0.14
SCARB2-208ENST00000638372 Q6ZVU0 165 aa14.17□□□□□ -0.14
SCARB2-208ENST00000638372 SNX20Q7Z614 316 aa14.17□□□□□ -0.14
SCARB2-208ENST00000638372 SERINC5Q86VE9 423 aa14.17□□□□□ -0.14
SCARB2-208ENST00000638372 FAM20CQ8IXL6 584 aa14.17□□□□□ -0.14
SCARB2-208ENST00000638372 RERGQ96A58 199 aaPredicted RBP14.17□□□□□ -0.14
SCARB2-208ENST00000638372 EXOSC8Q96B26 276 aaKnown RBP14.17□□□□□ -0.14
SCARB2-208ENST00000638372 C1orf109Q9NX04 203 aa14.17□□□□□ -0.14
SCARB2-208ENST00000638372 ADAMTS5Q9UNA0 930 aa14.17□□□□□ -0.14
SCARB2-208ENST00000638372 N6AMT1Q9Y5N5 214 aa14.17□□□□□ -0.14
SCARB2-208ENST00000638372 DPPA5A6NC42 116 aa14.16□□□□□ -0.14
SCARB2-208ENST00000638372 CLDN7O95471 211 aa14.16□□□□□ -0.14
SCARB2-208ENST00000638372 GTF2E2P29084 291 aaKnown RBP14.16□□□□□ -0.14
SCARB2-208ENST00000638372 YAP1P46937 504 aaKnown RBP14.16□□□□□ -0.14
SCARB2-208ENST00000638372 PTSQ03393 145 aa14.16□□□□□ -0.14
SCARB2-208ENST00000638372 TOP3AQ13472 1001 aaPredicted RBP14.16□□□□□ -0.14
SCARB2-208ENST00000638372 RFX4Q33E94 735 aa14.16□□□□□ -0.14
SCARB2-208ENST00000638372 ATAT1Q5SQI0 421 aa14.16□□□□□ -0.14
SCARB2-208ENST00000638372 ZNF461Q8TAF7 563 aa14.16□□□□□ -0.14
SCARB2-208ENST00000638372 ZNF599Q96NL3 588 aa14.16□□□□□ -0.14
SCARB2-208ENST00000638372 PTPN18Q99952 460 aa14.16□□□□□ -0.14
SCARB2-208ENST00000638372 FNDC11Q9BVV2 318 aa14.16□□□□□ -0.14
SCARB2-208ENST00000638372 AKTIPQ9H8T0 292 aa14.16□□□□□ -0.14
SCARB2-208ENST00000638372 HMG20AQ9NP66 347 aa14.16□□□□□ -0.14
SCARB2-208ENST00000638372 TOR4AQ9NXH8 423 aa14.16□□□□□ -0.14
SCARB2-208ENST00000638372 RFPL1O75677 317 aa14.16□□□□□ -0.14
SCARB2-208ENST00000638372 CKMT2P17540 419 aa14.16□□□□□ -0.14
SCARB2-208ENST00000638372 ZDHHC14Q8IZN3 488 aa14.16□□□□□ -0.14
SCARB2-208ENST00000638372 OR10T2Q8NGX3 314 aa14.16□□□□□ -0.14
SCARB2-208ENST00000638372 WDR60Q8WVS4 1066 aa14.16□□□□□ -0.14
SCARB2-208ENST00000638372 SPATA5L1Q9BVQ7 753 aa14.16□□□□□ -0.14
SCARB2-208ENST00000638372 PNPLA8Q9NP80 782 aa14.16□□□□□ -0.14
SCARB2-208ENST00000638372 RSL24D1Q9UHA3 163 aaKnown RBP14.16□□□□□ -0.14
SCARB2-208ENST00000638372 RAPGEFL1Q9UHV5 662 aa14.16□□□□□ -0.14
SCARB2-208ENST00000638372 MYH1P12882 1939 aa14.16□□□□□ -0.14
SCARB2-208ENST00000638372 PER2O15055 1255 aa14.16□□□□□ -0.14
SCARB2-208ENST00000638372 CHRNA6Q15825 494 aa14.16□□□□□ -0.14
SCARB2-208ENST00000638372 PERM1Q5SV97 790 aa14.16□□□□□ -0.14
SCARB2-208ENST00000638372 IRS2Q9Y4H2 1338 aa14.16□□□□□ -0.14
SCARB2-208ENST00000638372 CCDC88AQ3V6T2 1871 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms