RNA–Protein interactions for RNA: ENST00000638016.1

PNKP-230, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 109 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-230ENST00000638016 ERVH48-1M5A8F1 160 aa17.35■□□□□ 0.37
PNKP-230ENST00000638016 ARHGAP6O43182 974 aa17.35■□□□□ 0.37
PNKP-230ENST00000638016 KRT86O43790 486 aa17.35■□□□□ 0.37
PNKP-230ENST00000638016 IFNB1P01574 187 aa17.35■□□□□ 0.37
PNKP-230ENST00000638016 POLBP06746 335 aa17.35■□□□□ 0.37
PNKP-230ENST00000638016 ZSCAN5DPP0CG00 497 aa17.35■□□□□ 0.37
PNKP-230ENST00000638016 ITGALP20701 1170 aa17.35■□□□□ 0.37
PNKP-230ENST00000638016 HALP42357 657 aa17.35■□□□□ 0.37
PNKP-230ENST00000638016 CAPZBP47756 277 aa17.35■□□□□ 0.37
PNKP-230ENST00000638016 CCZ1BP86790 482 aa17.35■□□□□ 0.37
PNKP-230ENST00000638016 CCZ1P86791 482 aaPredicted RBP17.35■□□□□ 0.37
PNKP-230ENST00000638016 MC2RQ01718 297 aa17.35■□□□□ 0.37
PNKP-230ENST00000638016 RHDQ02161 417 aa17.35■□□□□ 0.37
PNKP-230ENST00000638016 SIX1Q15475 284 aaPredicted RBP17.35■□□□□ 0.37
PNKP-230ENST00000638016 ZRANB3Q5FWF4 1079 aa17.35■□□□□ 0.37
PNKP-230ENST00000638016 METRNLQ641Q3 311 aa17.35■□□□□ 0.37
PNKP-230ENST00000638016 FAM92BQ6ZTR7 304 aa17.35■□□□□ 0.37
PNKP-230ENST00000638016 SNX20Q7Z614 316 aa17.35■□□□□ 0.37
PNKP-230ENST00000638016 PIANPQ8IYJ0 282 aa17.35■□□□□ 0.37
PNKP-230ENST00000638016 AVL9Q8NBF6 648 aa17.35■□□□□ 0.37
PNKP-230ENST00000638016 NKD1Q969G9 470 aa17.35■□□□□ 0.37
PNKP-230ENST00000638016 RMDN2Q96LZ7 410 aa17.35■□□□□ 0.37
PNKP-230ENST00000638016 ETNK1Q9HBU6 452 aa17.35■□□□□ 0.37
PNKP-230ENST00000638016 PCDHGA4Q9Y5G9 962 aa17.35■□□□□ 0.37
PNKP-230ENST00000638016 PIEZO2Q9H5I5 2752 aa17.34■□□□□ 0.37
PNKP-230ENST00000638016 MGAT4DA6NG13 374 aa17.34■□□□□ 0.37
PNKP-230ENST00000638016 MTHFD1P11586 935 aaKnown RBP17.34■□□□□ 0.37
PNKP-230ENST00000638016 CD82P27701 267 aa17.34■□□□□ 0.37
PNKP-230ENST00000638016 P3H1Q32P28 736 aa17.34■□□□□ 0.37
PNKP-230ENST00000638016 BCL7AQ4VC05 210 aa17.34■□□□□ 0.37
PNKP-230ENST00000638016 DCAF12Q5T6F0 453 aa17.34■□□□□ 0.37
PNKP-230ENST00000638016 IRGCQ6NXR0 463 aa17.34■□□□□ 0.37
PNKP-230ENST00000638016 PLXDC1Q8IUK5 500 aa17.34■□□□□ 0.37
PNKP-230ENST00000638016 LRRC8AQ8IWT6 810 aa17.34■□□□□ 0.37
PNKP-230ENST00000638016 CCDC112Q8NEF3 446 aa17.34■□□□□ 0.37
PNKP-230ENST00000638016 OR2L2Q8NH16 312 aa17.34■□□□□ 0.37
PNKP-230ENST00000638016 C12orf66Q96MD2 445 aa17.34■□□□□ 0.37
PNKP-230ENST00000638016 PPP1R2P1Q96PQ5 205 aa17.34■□□□□ 0.37
PNKP-230ENST00000638016 EPB41L1Q9H4G0 881 aa17.34■□□□□ 0.37
PNKP-230ENST00000638016 NLE1Q9NVX2 485 aaPredicted RBP17.34■□□□□ 0.37
PNKP-230ENST00000638016 PCDHB11Q9Y5F2 797 aa17.34■□□□□ 0.37
PNKP-230ENST00000638016 COL6A6A6NMZ7 2263 aa17.33■□□□□ 0.37
PNKP-230ENST00000638016 TRBV5-4A0A0C4DH59 114 aa17.33■□□□□ 0.36
PNKP-230ENST00000638016 RAD1O60671 282 aa17.33■□□□□ 0.36
PNKP-230ENST00000638016 RASSF9O75901 435 aa17.33■□□□□ 0.36
PNKP-230ENST00000638016 ZNF28P17035 718 aa17.33■□□□□ 0.36
PNKP-230ENST00000638016 HADHAP40939 763 aa17.33■□□□□ 0.36
PNKP-230ENST00000638016 PRLHRP49683 370 aa17.33■□□□□ 0.36
PNKP-230ENST00000638016 RPS6KA1Q15418 735 aa17.33■□□□□ 0.36
PNKP-230ENST00000638016 CERS6Q6ZMG9 384 aa17.33■□□□□ 0.36
PNKP-230ENST00000638016 TIPARPQ7Z3E1 657 aaKnown RBP17.33■□□□□ 0.36
PNKP-230ENST00000638016 SERPINA9Q86WD7 417 aa17.33■□□□□ 0.36
PNKP-230ENST00000638016 CFAP206Q8IYR0 622 aa17.33■□□□□ 0.36
PNKP-230ENST00000638016 UNC5BQ8IZJ1 945 aa17.33■□□□□ 0.36
PNKP-230ENST00000638016 CLDN19Q8N6F1 224 aa17.33■□□□□ 0.36
PNKP-230ENST00000638016 DCUN1D1Q96GG9 259 aa17.33■□□□□ 0.36
PNKP-230ENST00000638016 CDKN2AIPNLQ96HQ2 116 aa17.33■□□□□ 0.36
PNKP-230ENST00000638016 ELMO2Q96JJ3 720 aa17.33■□□□□ 0.36
PNKP-230ENST00000638016 COPS8Q99627 209 aa17.33■□□□□ 0.36
PNKP-230ENST00000638016 SPRY4Q9C004 299 aa17.33■□□□□ 0.36
PNKP-230ENST00000638016 B3GNT4Q9C0J1 378 aa17.33■□□□□ 0.36
PNKP-230ENST00000638016 SLC2A6Q9UGQ3 507 aa17.33■□□□□ 0.36
PNKP-230ENST00000638016 FEZ2Q9UHY8 353 aaPredicted RBP17.33■□□□□ 0.36
PNKP-230ENST00000638016 PILRAQ9UKJ1 303 aa17.33■□□□□ 0.36
PNKP-230ENST00000638016 ZNF148Q9UQR1 794 aa17.33■□□□□ 0.36
PNKP-230ENST00000638016 DNMT3AQ9Y6K1 912 aaPredicted RBP17.33■□□□□ 0.36
PNKP-230ENST00000638016 PRSS21Q9Y6M0 314 aa17.33■□□□□ 0.36
PNKP-230ENST00000638016 KCNJ13O60928 360 aa17.32■□□□□ 0.36
PNKP-230ENST00000638016 ANKRD34CP0C6C1 535 aa17.32■□□□□ 0.36
PNKP-230ENST00000638016 ATP1B2P14415 290 aaPredicted RBP17.32■□□□□ 0.36
PNKP-230ENST00000638016 LIFP15018 202 aa17.32■□□□□ 0.36
PNKP-230ENST00000638016 ACRV1P26436 265 aa17.32■□□□□ 0.36
PNKP-230ENST00000638016 ARCN1P48444 511 aaKnown RBP17.32■□□□□ 0.36
PNKP-230ENST00000638016 RAB15P59190 212 aa17.32■□□□□ 0.36
PNKP-230ENST00000638016 PDE1BQ01064 536 aa17.32■□□□□ 0.36
PNKP-230ENST00000638016 FOXM1Q08050 763 aa17.32■□□□□ 0.36
PNKP-230ENST00000638016 PLCL1Q15111 1095 aa17.32■□□□□ 0.36
PNKP-230ENST00000638016 DBN1Q16643 649 aa17.32■□□□□ 0.36
PNKP-230ENST00000638016 LINC00303Q3SY05 128 aa17.32■□□□□ 0.36
PNKP-230ENST00000638016 CACHD1Q5VU97 1274 aa17.32■□□□□ 0.36
PNKP-230ENST00000638016 TAS2R42Q7RTR8 314 aa17.32■□□□□ 0.36
PNKP-230ENST00000638016 CACNA2D3Q8IZS8 1091 aa17.32■□□□□ 0.36
PNKP-230ENST00000638016 ZNF843Q8N446 348 aa17.32■□□□□ 0.36
PNKP-230ENST00000638016 IL22RA1Q8N6P7 574 aa17.32■□□□□ 0.36
PNKP-230ENST00000638016 EXTL1Q92935 676 aa17.32■□□□□ 0.36
PNKP-230ENST00000638016 ULK4Q96C45 1275 aa17.32■□□□□ 0.36
PNKP-230ENST00000638016 ZNF514Q96K75 400 aaPredicted RBP17.32■□□□□ 0.36
PNKP-230ENST00000638016 PPM1MQ96MI6 270 aa17.32■□□□□ 0.36
PNKP-230ENST00000638016 ZNF778Q96MU6 729 aa17.32■□□□□ 0.36
PNKP-230ENST00000638016 ZNF768Q9H5H4 540 aaKnown RBP17.32■□□□□ 0.36
PNKP-230ENST00000638016 ZDHHC3Q9NYG2 299 aa17.32■□□□□ 0.36
PNKP-230ENST00000638016 IGLV3-16A0A075B6K0 115 aa17.31■□□□□ 0.36
PNKP-230ENST00000638016 MROH6A6NGR9 719 aa17.31■□□□□ 0.36
PNKP-230ENST00000638016 H7C0S8 307 aa17.31■□□□□ 0.36
PNKP-230ENST00000638016 ZNF189O75820 626 aaPredicted RBP17.31■□□□□ 0.36
PNKP-230ENST00000638016 STK17BO94768 372 aa17.31■□□□□ 0.36
PNKP-230ENST00000638016 CCDC175P0C221 793 aa17.31■□□□□ 0.36
PNKP-230ENST00000638016 CXCR5P32302 372 aa17.31■□□□□ 0.36
PNKP-230ENST00000638016 KCNAB1Q14722 419 aa17.31■□□□□ 0.36
PNKP-230ENST00000638016 ZNF658BQ4V348 819 aaPredicted RBP17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms