RNA–Protein interactions for RNA: ENST00000636549.1

CACNA1A-227, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,792 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-227ENST00000636549 NFKB2Q00653 900 aa17.65■□□□□ 0.42
CACNA1A-227ENST00000636549 TNK2Q07912 1038 aa17.65■□□□□ 0.42
CACNA1A-227ENST00000636549 TNFAIP8L2Q6P589 184 aaPredicted RBP17.65■□□□□ 0.42
CACNA1A-227ENST00000636549 GATSQ8NAP1 163 aa17.65■□□□□ 0.42
CACNA1A-227ENST00000636549 MNTQ99583 582 aa17.65■□□□□ 0.42
CACNA1A-227ENST00000636549 MUSKO15146 869 aa17.65■□□□□ 0.42
CACNA1A-227ENST00000636549 NDUFS4O43181 175 aa17.65■□□□□ 0.42
CACNA1A-227ENST00000636549 TNFP01375 233 aa17.65■□□□□ 0.42
CACNA1A-227ENST00000636549 CYP1A2P05177 515 aa17.65■□□□□ 0.42
CACNA1A-227ENST00000636549 PAEPP09466 180 aa17.65■□□□□ 0.42
CACNA1A-227ENST00000636549 FPGSQ05932 587 aa17.65■□□□□ 0.42
CACNA1A-227ENST00000636549 TATDN1Q6P1N9 297 aa17.65■□□□□ 0.42
CACNA1A-227ENST00000636549 CNPY4Q8N129 248 aa17.65■□□□□ 0.42
CACNA1A-227ENST00000636549 TMEM145Q8NBT3 493 aa17.65■□□□□ 0.42
CACNA1A-227ENST00000636549 ETS2P15036 469 aa17.64■□□□□ 0.42
CACNA1A-227ENST00000636549 IL7RP16871 459 aa17.64■□□□□ 0.42
CACNA1A-227ENST00000636549 RPL7AP62424 266 aaKnown RBP17.64■□□□□ 0.42
CACNA1A-227ENST00000636549 SULT2A1Q06520 285 aa17.64■□□□□ 0.42
CACNA1A-227ENST00000636549 RAB11FIP2Q7L804 512 aa17.64■□□□□ 0.42
CACNA1A-227ENST00000636549 KCNK18Q7Z418 384 aa17.64■□□□□ 0.42
CACNA1A-227ENST00000636549 TMC8Q8IU68 726 aa17.64■□□□□ 0.42
CACNA1A-227ENST00000636549 SPATA22Q8NHS9 363 aa17.64■□□□□ 0.42
CACNA1A-227ENST00000636549 CDK15Q96Q40 435 aa17.64■□□□□ 0.42
CACNA1A-227ENST00000636549 GPR21Q99679 349 aa17.64■□□□□ 0.42
CACNA1A-227ENST00000636549 C11orf49Q9H6J7 331 aa17.64■□□□□ 0.42
CACNA1A-227ENST00000636549 FKBP7Q9Y680 259 aa17.64■□□□□ 0.42
CACNA1A-227ENST00000636549 TNFSF12-TNFSF13A0A0A6YY99 330 aa17.64■□□□□ 0.41
CACNA1A-227ENST00000636549 TRIM38O00635 465 aa17.64■□□□□ 0.41
CACNA1A-227ENST00000636549 TNFSF12O43508 249 aa17.64■□□□□ 0.41
CACNA1A-227ENST00000636549 METTL18O95568 372 aa17.64■□□□□ 0.41
CACNA1A-227ENST00000636549 ACVR2AP27037 513 aa17.64■□□□□ 0.41
CACNA1A-227ENST00000636549 LRRC32Q14392 662 aa17.64■□□□□ 0.41
CACNA1A-227ENST00000636549 TBL1XR1Q9BZK7 514 aa17.64■□□□□ 0.41
CACNA1A-227ENST00000636549 ZNF510Q9Y2H8 683 aa17.64■□□□□ 0.41
CACNA1A-227ENST00000636549 ANXA2P2A6NMY6 339 aa17.64■□□□□ 0.41
CACNA1A-227ENST00000636549 ANXA2P07355 339 aaKnown RBP17.64■□□□□ 0.41
CACNA1A-227ENST00000636549 MPSTP25325 297 aa17.64■□□□□ 0.41
CACNA1A-227ENST00000636549 PTGES3Q15185 160 aaKnown RBP17.64■□□□□ 0.41
CACNA1A-227ENST00000636549 TMPRSS6Q8IU80 811 aa17.64■□□□□ 0.41
CACNA1A-227ENST00000636549 GIPC3Q8TF64 312 aa17.64■□□□□ 0.41
CACNA1A-227ENST00000636549 PRR11Q96HE9 360 aaPredicted RBP17.64■□□□□ 0.41
CACNA1A-227ENST00000636549 DCLRE1BQ9H816 532 aa17.64■□□□□ 0.41
CACNA1A-227ENST00000636549 GIN1Q9NXP7 522 aa17.64■□□□□ 0.41
CACNA1A-227ENST00000636549 MCL1Q07820 350 aa17.64■□□□□ 0.41
CACNA1A-227ENST00000636549 PLEKHG6Q3KR16 790 aa17.64■□□□□ 0.41
CACNA1A-227ENST00000636549 TIGD2Q4W5G0 525 aa17.64■□□□□ 0.41
CACNA1A-227ENST00000636549 GCNT6Q5T4J0 391 aa17.64■□□□□ 0.41
CACNA1A-227ENST00000636549 ZNF557Q8N988 423 aaPredicted RBP17.64■□□□□ 0.41
CACNA1A-227ENST00000636549 CLP1Q92989 425 aaKnown RBP17.64■□□□□ 0.41
CACNA1A-227ENST00000636549 PRDM16Q9HAZ2 1276 aa17.64■□□□□ 0.41
CACNA1A-227ENST00000636549 IL36AQ9UHA7 158 aa17.64■□□□□ 0.41
CACNA1A-227ENST00000636549 GTF2IRD1Q9UHL9 959 aa17.64■□□□□ 0.41
CACNA1A-227ENST00000636549 ANXA4P09525 319 aaPredicted RBP17.64■□□□□ 0.41
CACNA1A-227ENST00000636549 DRD4P21917 467 aa17.64■□□□□ 0.41
CACNA1A-227ENST00000636549 VBP1P61758 197 aa17.64■□□□□ 0.41
CACNA1A-227ENST00000636549 UBQLNLQ8IYU4 475 aa17.64■□□□□ 0.41
CACNA1A-227ENST00000636549 IL22RA1Q8N6P7 574 aa17.64■□□□□ 0.41
CACNA1A-227ENST00000636549 ACTRT1Q8TDG2 376 aa17.64■□□□□ 0.41
CACNA1A-227ENST00000636549 ADAP2Q9NPF8 381 aa17.64■□□□□ 0.41
CACNA1A-227ENST00000636549 SNX15Q9NRS6 342 aa17.64■□□□□ 0.41
CACNA1A-227ENST00000636549 S100A10P60903 97 aa17.64■□□□□ 0.41
CACNA1A-227ENST00000636549 NAIF1Q69YI7 327 aaPredicted RBP17.64■□□□□ 0.41
CACNA1A-227ENST00000636549 PYROXD2Q8N2H3 581 aa17.64■□□□□ 0.41
CACNA1A-227ENST00000636549 CYP8B1Q9UNU6 501 aa17.64■□□□□ 0.41
CACNA1A-227ENST00000636549 WNT3AP56704 352 aa17.63■□□□□ 0.41
CACNA1A-227ENST00000636549 PSME3P61289 254 aa17.63■□□□□ 0.41
CACNA1A-227ENST00000636549 CCL14Q16627 93 aa17.63■□□□□ 0.41
CACNA1A-227ENST00000636549 FUT10Q6P4F1 479 aa17.63■□□□□ 0.41
CACNA1A-227ENST00000636549 COMMD4Q9H0A8 199 aa17.63■□□□□ 0.41
CACNA1A-227ENST00000636549 SMCO3A2RU48 225 aa17.63■□□□□ 0.41
CACNA1A-227ENST00000636549 NKAPLQ5M9Q1 402 aa17.63■□□□□ 0.41
CACNA1A-227ENST00000636549 PLA2G15Q8NCC3 412 aa17.63■□□□□ 0.41
CACNA1A-227ENST00000636549 FBXL3Q9UKT7 428 aa17.63■□□□□ 0.41
CACNA1A-227ENST00000636549 A0A0U1RQJ8 604 aa17.63■□□□□ 0.41
CACNA1A-227ENST00000636549 MID1O15344 667 aa17.63■□□□□ 0.41
CACNA1A-227ENST00000636549 FKBP6O75344 327 aa17.63■□□□□ 0.41
CACNA1A-227ENST00000636549 REM1O75628 298 aa17.63■□□□□ 0.41
CACNA1A-227ENST00000636549 CLCN5P51795 746 aa17.63■□□□□ 0.41
CACNA1A-227ENST00000636549 SLC34A1Q06495 639 aa17.63■□□□□ 0.41
CACNA1A-227ENST00000636549 EEF1DP3Q658K8 133 aa17.63■□□□□ 0.41
CACNA1A-227ENST00000636549 RNF43Q68DV7 783 aa17.63■□□□□ 0.41
CACNA1A-227ENST00000636549 CAND1Q86VP6 1230 aaKnown RBP17.63■□□□□ 0.41
CACNA1A-227ENST00000636549 OR4K17Q8NGC6 315 aa17.63■□□□□ 0.41
CACNA1A-227ENST00000636549 SH3YL1Q96HL8 342 aaPredicted RBP17.63■□□□□ 0.41
CACNA1A-227ENST00000636549 MCCC1Q96RQ3 725 aaPredicted RBP17.63■□□□□ 0.41
CACNA1A-227ENST00000636549 FAM198AQ9UFP1 575 aa17.63■□□□□ 0.41
CACNA1A-227ENST00000636549 MBD5Q9P267 1494 aa17.63■□□□□ 0.41
CACNA1A-227ENST00000636549 INHBEP58166 350 aa17.63■□□□□ 0.41
CACNA1A-227ENST00000636549 OR4E2Q8NGC2 313 aa17.63■□□□□ 0.41
CACNA1A-227ENST00000636549 WDR18Q9BV38 432 aa17.63■□□□□ 0.41
CACNA1A-227ENST00000636549 METTL8Q9H825 291 aaKnown RBP17.63■□□□□ 0.41
CACNA1A-227ENST00000636549 FOXO6A8MYZ6 492 aa17.63■□□□□ 0.41
CACNA1A-227ENST00000636549 MAPTP10636 758 aaKnown RBP17.63■□□□□ 0.41
CACNA1A-227ENST00000636549 CD53P19397 219 aa17.63■□□□□ 0.41
CACNA1A-227ENST00000636549 SPAG4Q9NPE6 437 aa17.63■□□□□ 0.41
CACNA1A-227ENST00000636549 PCDHB3Q9Y5E6 796 aa17.63■□□□□ 0.41
CACNA1A-227ENST00000636549 ITGAVP06756 1048 aa17.62■□□□□ 0.41
CACNA1A-227ENST00000636549 S100A1P23297 94 aa17.62■□□□□ 0.41
CACNA1A-227ENST00000636549 CSKP41240 450 aa17.62■□□□□ 0.41
CACNA1A-227ENST00000636549 APOBEC3HQ6NTF7 200 aaKnown RBP17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms