RNA–Protein interactions for RNA: ENST00000635988.1

CACNA1A-220, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 2,548 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-220ENST00000635988 MBLAC1A4D2B0 266 aaPredicted RBP14.61□□□□□ -0.07
CACNA1A-220ENST00000635988 FGF1P05230 155 aa14.61□□□□□ -0.07
CACNA1A-220ENST00000635988 ACVR2AP27037 513 aa14.61□□□□□ -0.07
CACNA1A-220ENST00000635988 CD40LGP29965 261 aa14.61□□□□□ -0.07
CACNA1A-220ENST00000635988 PRDX3P30048 256 aaKnown RBP14.61□□□□□ -0.07
CACNA1A-220ENST00000635988 MLLT6P55198 1093 aaPredicted RBP14.61□□□□□ -0.07
CACNA1A-220ENST00000635988 CDK5R2Q13319 367 aa14.61□□□□□ -0.07
CACNA1A-220ENST00000635988 DNASE1L3Q13609 305 aa14.61□□□□□ -0.07
CACNA1A-220ENST00000635988 SELPLGQ14242 412 aa14.61□□□□□ -0.07
CACNA1A-220ENST00000635988 TSNQ15631 228 aaKnown RBP14.61□□□□□ -0.07
CACNA1A-220ENST00000635988 PGS1Q32NB8 556 aa14.61□□□□□ -0.07
CACNA1A-220ENST00000635988 PAQR3Q6TCH7 311 aa14.61□□□□□ -0.07
CACNA1A-220ENST00000635988 PRSS48Q7RTY5 328 aa14.61□□□□□ -0.07
CACNA1A-220ENST00000635988 HIPK1Q86Z02 1210 aa14.61□□□□□ -0.07
CACNA1A-220ENST00000635988 TEX26Q8N6G2 289 aa14.61□□□□□ -0.07
CACNA1A-220ENST00000635988 FBXO30Q8TB52 745 aa14.61□□□□□ -0.07
CACNA1A-220ENST00000635988 DYNC2LI1Q8TCX1 351 aa14.61□□□□□ -0.07
CACNA1A-220ENST00000635988 TMEM40Q8WWA1 233 aa14.61□□□□□ -0.07
CACNA1A-220ENST00000635988 FUBP1Q96AE4 644 aaKnown RBP14.61□□□□□ -0.07
CACNA1A-220ENST00000635988 YIPF6Q96EC8 236 aa14.61□□□□□ -0.07
CACNA1A-220ENST00000635988 C1orf74Q96LT6 269 aa14.61□□□□□ -0.07
CACNA1A-220ENST00000635988 ZNF382Q96SR6 550 aa14.61□□□□□ -0.07
CACNA1A-220ENST00000635988 NOL6Q9H6R4 1146 aaKnown RBP14.61□□□□□ -0.07
CACNA1A-220ENST00000635988 MAGIXQ9H6Y5 334 aa14.61□□□□□ -0.07
CACNA1A-220ENST00000635988 ELP3Q9H9T3 547 aa14.61□□□□□ -0.07
CACNA1A-220ENST00000635988 SACM1LQ9NTJ5 587 aa14.61□□□□□ -0.07
CACNA1A-220ENST00000635988 PAK1IP1Q9NWT1 392 aaPredicted RBP14.61□□□□□ -0.07
CACNA1A-220ENST00000635988 ZNF225Q9UK10 706 aa14.61□□□□□ -0.07
CACNA1A-220ENST00000635988 MRPS14O60783 128 aaKnown RBP14.61□□□□□ -0.07
CACNA1A-220ENST00000635988 ANGPTL1O95841 491 aa14.61□□□□□ -0.07
CACNA1A-220ENST00000635988 CYP11A1P05108 521 aa14.61□□□□□ -0.07
CACNA1A-220ENST00000635988 ITGAMP11215 1152 aa14.61□□□□□ -0.07
CACNA1A-220ENST00000635988 PTPN2P17706 415 aa14.61□□□□□ -0.07
CACNA1A-220ENST00000635988 ST13P50502 369 aaKnown RBP14.61□□□□□ -0.07
CACNA1A-220ENST00000635988 CXCR4P61073 352 aa14.61□□□□□ -0.07
CACNA1A-220ENST00000635988 MVKQ03426 396 aa14.61□□□□□ -0.07
CACNA1A-220ENST00000635988 DUSP28Q4G0W2 176 aa14.61□□□□□ -0.07
CACNA1A-220ENST00000635988 MSANTD2Q6P1R3 559 aa14.61□□□□□ -0.07
CACNA1A-220ENST00000635988 SLC22A16Q86VW1 577 aa14.61□□□□□ -0.07
CACNA1A-220ENST00000635988 SVOPQ8N4V2 548 aa14.61□□□□□ -0.07
CACNA1A-220ENST00000635988 OR6J1Q8NGC5 347 aa14.61□□□□□ -0.07
CACNA1A-220ENST00000635988 NDNFQ8TB73 568 aa14.61□□□□□ -0.07
CACNA1A-220ENST00000635988 BRSK1Q8TDC3 778 aa14.61□□□□□ -0.07
CACNA1A-220ENST00000635988 MCOLN3Q8TDD5 553 aa14.61□□□□□ -0.07
CACNA1A-220ENST00000635988 ACOX2Q99424 681 aa14.61□□□□□ -0.07
CACNA1A-220ENST00000635988 EPS8L2Q9H6S3 715 aa14.61□□□□□ -0.07
CACNA1A-220ENST00000635988 SCN3BQ9NY72 215 aa14.61□□□□□ -0.07
CACNA1A-220ENST00000635988 HS3ST4Q9Y661 456 aa14.61□□□□□ -0.07
CACNA1A-220ENST00000635988 HSPE1-MOB4S4R3N1 261 aa14.61□□□□□ -0.07
CACNA1A-220ENST00000635988 TNS1Q9HBL0 1735 aaKnown RBP14.61□□□□□ -0.07
CACNA1A-220ENST00000635988 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.6□□□□□ -0.07
CACNA1A-220ENST00000635988 BCKDKO14874 412 aa14.6□□□□□ -0.07
CACNA1A-220ENST00000635988 PRKD3O94806 890 aa14.6□□□□□ -0.07
CACNA1A-220ENST00000635988 EPOP01588 193 aa14.6□□□□□ -0.07
CACNA1A-220ENST00000635988 SMIM10L2AP0DMW4 78 aa14.6□□□□□ -0.07
CACNA1A-220ENST00000635988 SMIM10L2BP0DMW5 78 aa14.6□□□□□ -0.07
CACNA1A-220ENST00000635988 JUNDP17535 347 aa14.6□□□□□ -0.07
CACNA1A-220ENST00000635988 IST1P53990 364 aa14.6□□□□□ -0.07
CACNA1A-220ENST00000635988 SELENBP1Q13228 472 aa14.6□□□□□ -0.07
CACNA1A-220ENST00000635988 SEMA3AQ14563 771 aa14.6□□□□□ -0.07
CACNA1A-220ENST00000635988 SYT6Q5T7P8 510 aaPredicted RBP14.6□□□□□ -0.07
CACNA1A-220ENST00000635988 TWF2Q6IBS0 349 aaKnown RBP14.6□□□□□ -0.07
CACNA1A-220ENST00000635988 SCIMPQ6UWF3 145 aa14.6□□□□□ -0.07
CACNA1A-220ENST00000635988 ENPP6Q6UWR7 440 aa14.6□□□□□ -0.07
CACNA1A-220ENST00000635988 Q6ZSR9 355 aa14.6□□□□□ -0.07
CACNA1A-220ENST00000635988 GALNT13Q8IUC8 556 aa14.6□□□□□ -0.07
CACNA1A-220ENST00000635988 LGI2Q8N0V4 545 aa14.6□□□□□ -0.07
CACNA1A-220ENST00000635988 ARL10Q8N8L6 244 aa14.6□□□□□ -0.07
CACNA1A-220ENST00000635988 REXO5Q96IC2 774 aaKnown RBP14.6□□□□□ -0.07
CACNA1A-220ENST00000635988 ZFP42Q96MM3 310 aa14.6□□□□□ -0.07
CACNA1A-220ENST00000635988 ZNF229Q9UJW7 825 aa14.6□□□□□ -0.07
CACNA1A-220ENST00000635988 PAPPA2Q9BXP8 1791 aa14.6□□□□□ -0.07
CACNA1A-220ENST00000635988 UBA6A0AVT1 1052 aaPredicted RBP14.6□□□□□ -0.07
CACNA1A-220ENST00000635988 J3KR12 359 aa14.6□□□□□ -0.07
CACNA1A-220ENST00000635988 SEC24AO95486 1093 aa14.6□□□□□ -0.07
CACNA1A-220ENST00000635988 RHOQP17081 205 aa14.6□□□□□ -0.07
CACNA1A-220ENST00000635988 IGFBP6P24592 240 aaPredicted RBP14.6□□□□□ -0.07
CACNA1A-220ENST00000635988 DCTP40126 519 aa14.6□□□□□ -0.07
CACNA1A-220ENST00000635988 TPTEP56180 551 aa14.6□□□□□ -0.07
CACNA1A-220ENST00000635988 PLA2G4EQ3MJ16 856 aa14.6□□□□□ -0.07
CACNA1A-220ENST00000635988 CYP20A1Q6UW02 462 aa14.6□□□□□ -0.07
CACNA1A-220ENST00000635988 C14orf80Q86SX3 495 aa14.6□□□□□ -0.07
CACNA1A-220ENST00000635988 CHCHD4Q8N4Q1 142 aa14.6□□□□□ -0.07
CACNA1A-220ENST00000635988 ZNF548Q8NEK5 533 aaPredicted RBP14.6□□□□□ -0.07
CACNA1A-220ENST00000635988 RHOXF1Q8NHV9 184 aa14.6□□□□□ -0.07
CACNA1A-220ENST00000635988 ARRDC2Q8TBH0 407 aa14.6□□□□□ -0.07
CACNA1A-220ENST00000635988 BLOC1S5Q8TDH9 187 aa14.6□□□□□ -0.07
CACNA1A-220ENST00000635988 DNAJB3Q8WWF6 145 aa14.6□□□□□ -0.07
CACNA1A-220ENST00000635988 FAM162AQ96A26 154 aa14.6□□□□□ -0.07
CACNA1A-220ENST00000635988 HMCESQ96FZ2 354 aa14.6□□□□□ -0.07
CACNA1A-220ENST00000635988 DACH2Q96NX9 599 aa14.6□□□□□ -0.07
CACNA1A-220ENST00000635988 KLHL5Q96PQ7 755 aa14.6□□□□□ -0.07
CACNA1A-220ENST00000635988 ZNF300Q96RE9 604 aaPredicted RBP14.6□□□□□ -0.07
CACNA1A-220ENST00000635988 KATNBL1Q9H079 304 aa14.6□□□□□ -0.07
CACNA1A-220ENST00000635988 MOV10Q9HCE1 1003 aaKnown RBP14.6□□□□□ -0.07
CACNA1A-220ENST00000635988 SCUBE2Q9NQ36 999 aa14.6□□□□□ -0.07
CACNA1A-220ENST00000635988 GALPQ9UBC7 116 aa14.6□□□□□ -0.07
CACNA1A-220ENST00000635988 KLHL3Q9UH77 587 aa14.6□□□□□ -0.07
CACNA1A-220ENST00000635988 IFT52Q9Y366 437 aa14.6□□□□□ -0.07
CACNA1A-220ENST00000635988 ELOVL7A1L3X0 281 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms