RNA–Protein interactions for RNA: ENST00000634934.2

LINC00339-208, long intergenic non-protein coding RNA 339, humanhuman

TSL 5 BASIC

Gene LINC00339, Length 1,518 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-208ENST00000634934 GNPDA1P46926 289 aa14.22□□□□□ -0.13
LINC00339-208ENST00000634934 LIMK2P53671 638 aa14.22□□□□□ -0.13
LINC00339-208ENST00000634934 ADARP55265 1226 aaKnown RBP14.22□□□□□ -0.13
LINC00339-208ENST00000634934 SRP54P61011 504 aaKnown RBP14.22□□□□□ -0.13
LINC00339-208ENST00000634934 BNIP1Q12981 228 aa14.22□□□□□ -0.13
LINC00339-208ENST00000634934 BMPR2Q13873 1038 aa14.22□□□□□ -0.13
LINC00339-208ENST00000634934 FZD2Q14332 565 aa14.22□□□□□ -0.13
LINC00339-208ENST00000634934 CTSL3PQ5NE16 218 aa14.22□□□□□ -0.13
LINC00339-208ENST00000634934 RBM20Q5T481 1227 aaKnown RBP14.22□□□□□ -0.13
LINC00339-208ENST00000634934 ZNF549Q6P9A3 640 aa14.22□□□□□ -0.13
LINC00339-208ENST00000634934 ALYREFQ86V81 257 aaKnown RBP14.22□□□□□ -0.13
LINC00339-208ENST00000634934 HID1Q8IV36 788 aa14.22□□□□□ -0.13
LINC00339-208ENST00000634934 BEND7Q8N7W2 519 aaPredicted RBP14.22□□□□□ -0.13
LINC00339-208ENST00000634934 OR1E3Q8WZA6 343 aa14.22□□□□□ -0.13
LINC00339-208ENST00000634934 FAM136AQ96C01 138 aa14.22□□□□□ -0.13
LINC00339-208ENST00000634934 PDXPQ96GD0 296 aa14.22□□□□□ -0.13
LINC00339-208ENST00000634934 ELMO2Q96JJ3 720 aa14.22□□□□□ -0.13
LINC00339-208ENST00000634934 AARSD1Q9BTE6 412 aaKnown RBP14.22□□□□□ -0.13
LINC00339-208ENST00000634934 CARS2Q9HA77 564 aaKnown RBP14.22□□□□□ -0.13
LINC00339-208ENST00000634934 GPR27Q9NS67 375 aa14.22□□□□□ -0.13
LINC00339-208ENST00000634934 GEMIN8Q9NWZ8 242 aaKnown RBP14.22□□□□□ -0.13
LINC00339-208ENST00000634934 NKIRAS1Q9NYS0 192 aa14.22□□□□□ -0.13
LINC00339-208ENST00000634934 PSMC3IPQ9P2W1 217 aaPredicted RBP14.22□□□□□ -0.13
LINC00339-208ENST00000634934 TBK1Q9UHD2 729 aa14.22□□□□□ -0.13
LINC00339-208ENST00000634934 SUFUQ9UMX1 484 aa14.22□□□□□ -0.13
LINC00339-208ENST00000634934 MTO1Q9Y2Z2 717 aaKnown RBP14.22□□□□□ -0.13
LINC00339-208ENST00000634934 GPSM3Q9Y4H4 160 aa14.22□□□□□ -0.13
LINC00339-208ENST00000634934 PLXNB3Q9ULL4 1909 aa14.22□□□□□ -0.13
LINC00339-208ENST00000634934 FAM95CA0A1B0GW59 222 aa14.21□□□□□ -0.13
LINC00339-208ENST00000634934 PRSS38A1L453 326 aa14.21□□□□□ -0.13
LINC00339-208ENST00000634934 E5RI56 91 aa14.21□□□□□ -0.13
LINC00339-208ENST00000634934 F8W8V4 182 aa14.21□□□□□ -0.13
LINC00339-208ENST00000634934 H3BMM5 538 aa14.21□□□□□ -0.13
LINC00339-208ENST00000634934 TNFRSF10CO14798 259 aa14.21□□□□□ -0.13
LINC00339-208ENST00000634934 DNAJC6O75061 913 aa14.21□□□□□ -0.13
LINC00339-208ENST00000634934 NIPSNAP2O75323 286 aa14.21□□□□□ -0.13
LINC00339-208ENST00000634934 TRIM16O95361 564 aa14.21□□□□□ -0.13
LINC00339-208ENST00000634934 FUCA1P04066 466 aa14.21□□□□□ -0.13
LINC00339-208ENST00000634934 CFIP05156 583 aa14.21□□□□□ -0.13
LINC00339-208ENST00000634934 ITGA2BP08514 1039 aa14.21□□□□□ -0.13
LINC00339-208ENST00000634934 BRAFP15056 766 aa14.21□□□□□ -0.13
LINC00339-208ENST00000634934 CHRM3P20309 590 aa14.21□□□□□ -0.13
LINC00339-208ENST00000634934 PBLDP30039 288 aaPredicted RBP14.21□□□□□ -0.13
LINC00339-208ENST00000634934 SERPINB9P50453 376 aa14.21□□□□□ -0.13
LINC00339-208ENST00000634934 NXPH1P58417 271 aa14.21□□□□□ -0.13
LINC00339-208ENST00000634934 ELF3P78545 371 aaPredicted RBP14.21□□□□□ -0.13
LINC00339-208ENST00000634934 IL9RQ01113 521 aa14.21□□□□□ -0.13
LINC00339-208ENST00000634934 ALG11Q2TAA5 492 aa14.21□□□□□ -0.13
LINC00339-208ENST00000634934 PLA2G4EQ3MJ16 856 aa14.21□□□□□ -0.13
LINC00339-208ENST00000634934 ZNF542PQ5EBM4 170 aa14.21□□□□□ -0.13
LINC00339-208ENST00000634934 MROH9Q5TGP6 573 aa14.21□□□□□ -0.13
LINC00339-208ENST00000634934 LAIR1Q6GTX8 287 aa14.21□□□□□ -0.13
LINC00339-208ENST00000634934 SPATA21Q7Z572 469 aa14.21□□□□□ -0.13
LINC00339-208ENST00000634934 TRABD2AQ86V40 505 aa14.21□□□□□ -0.13
LINC00339-208ENST00000634934 LRRTM4Q86VH4 590 aa14.21□□□□□ -0.13
LINC00339-208ENST00000634934 PARGQ86W56 976 aa14.21□□□□□ -0.13
LINC00339-208ENST00000634934 GALNT13Q8IUC8 556 aa14.21□□□□□ -0.13
LINC00339-208ENST00000634934 CCDC63Q8NA47 563 aa14.21□□□□□ -0.13
LINC00339-208ENST00000634934 DENND1AQ8TEH3 1009 aa14.21□□□□□ -0.13
LINC00339-208ENST00000634934 DYDC1Q8WWB3 177 aa14.21□□□□□ -0.13
LINC00339-208ENST00000634934 LOXL4Q96JB6 756 aa14.21□□□□□ -0.13
LINC00339-208ENST00000634934 ZNF514Q96K75 400 aaPredicted RBP14.21□□□□□ -0.13
LINC00339-208ENST00000634934 ANKRD27Q96NW4 1050 aa14.21□□□□□ -0.13
LINC00339-208ENST00000634934 ELAC2Q9BQ52 826 aaKnown RBP14.21□□□□□ -0.13
LINC00339-208ENST00000634934 MCMBPQ9BTE3 642 aa14.21□□□□□ -0.13
LINC00339-208ENST00000634934 DHRS4Q9BTZ2 278 aa14.21□□□□□ -0.13
LINC00339-208ENST00000634934 ARRDC1-AS1Q9H2J1 176 aa14.21□□□□□ -0.13
LINC00339-208ENST00000634934 SMOC1Q9H4F8 434 aa14.21□□□□□ -0.13
LINC00339-208ENST00000634934 RMI1Q9H9A7 625 aa14.21□□□□□ -0.13
LINC00339-208ENST00000634934 SARS2Q9NP81 518 aaKnown RBP14.21□□□□□ -0.13
LINC00339-208ENST00000634934 NCDNQ9UBB6 729 aa14.21□□□□□ -0.13
LINC00339-208ENST00000634934 CTNNAL1Q9UBT7 734 aa14.21□□□□□ -0.13
LINC00339-208ENST00000634934 ZNF180Q9UJW8 692 aa14.21□□□□□ -0.13
LINC00339-208ENST00000634934 SLC39A10Q9ULF5 831 aa14.21□□□□□ -0.13
LINC00339-208ENST00000634934 CORO1CQ9ULV4 474 aaPredicted RBP14.21□□□□□ -0.13
LINC00339-208ENST00000634934 ANKRD6Q9Y2G4 727 aa14.21□□□□□ -0.13
LINC00339-208ENST00000634934 PCYT1BQ9Y5K3 369 aaPredicted RBP14.21□□□□□ -0.13
LINC00339-208ENST00000634934 BPTFQ12830 3046 aa14.21□□□□□ -0.13
LINC00339-208ENST00000634934 GPR89AB7ZAQ6 455 aa14.2□□□□□ -0.14
LINC00339-208ENST00000634934 QSOX1O00391 747 aa14.2□□□□□ -0.14
LINC00339-208ENST00000634934 SGTAO43765 313 aa14.2□□□□□ -0.14
LINC00339-208ENST00000634934 KRT38O76015 456 aa14.2□□□□□ -0.14
LINC00339-208ENST00000634934 WFS1O76024 890 aa14.2□□□□□ -0.14
LINC00339-208ENST00000634934 EPN2O95208 641 aa14.2□□□□□ -0.14
LINC00339-208ENST00000634934 GPR89BP0CG08 455 aa14.2□□□□□ -0.14
LINC00339-208ENST00000634934 HOXD12P35452 270 aa14.2□□□□□ -0.14
LINC00339-208ENST00000634934 PPARDQ03181 441 aa14.2□□□□□ -0.14
LINC00339-208ENST00000634934 EIF2B5Q13144 721 aaKnown RBP14.2□□□□□ -0.14
LINC00339-208ENST00000634934 TMED2Q15363 201 aa14.2□□□□□ -0.14
LINC00339-208ENST00000634934 DUOXA1Q1HG43 343 aa14.2□□□□□ -0.14
LINC00339-208ENST00000634934 BCL7AQ4VC05 210 aa14.2□□□□□ -0.14
LINC00339-208ENST00000634934 LGSNQ5TDP6 509 aa14.2□□□□□ -0.14
LINC00339-208ENST00000634934 HECTD2Q5U5R9 776 aa14.2□□□□□ -0.14
LINC00339-208ENST00000634934 ADGRD1Q6QNK2 874 aa14.2□□□□□ -0.14
LINC00339-208ENST00000634934 RABEPKQ7Z6M1 372 aa14.2□□□□□ -0.14
LINC00339-208ENST00000634934 ZNF547Q8IVP9 402 aa14.2□□□□□ -0.14
LINC00339-208ENST00000634934 ACVR1CQ8NER5 493 aa14.2□□□□□ -0.14
LINC00339-208ENST00000634934 CEP76Q8TAP6 659 aa14.2□□□□□ -0.14
LINC00339-208ENST00000634934 TSSK1BQ9BXA7 367 aa14.2□□□□□ -0.14
LINC00339-208ENST00000634934 TM7SF3Q9NS93 570 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms