RNA–Protein interactions for RNA: ENST00000630962.1

SRP54-214, Transcript of signal recognition particle 54, humanhuman

TSL 5 BASIC

Gene SRP54, Length 162 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-214ENST00000630962 MBD4O95243 580 aa3.04□□□□□ -1.92
SRP54-214ENST00000630962 TBX18O95935 607 aa3.04□□□□□ -1.92
SRP54-214ENST00000630962 CLPTM1O96005 669 aa3.04□□□□□ -1.92
SRP54-214ENST00000630962 GNB3P16520 340 aa3.04□□□□□ -1.92
SRP54-214ENST00000630962 RGS19P49795 217 aa3.04□□□□□ -1.92
SRP54-214ENST00000630962 MMP15P51511 669 aa3.04□□□□□ -1.92
SRP54-214ENST00000630962 CD81P60033 236 aa3.04□□□□□ -1.92
SRP54-214ENST00000630962 ARF3P61204 181 aaPredicted RBP3.04□□□□□ -1.92
SRP54-214ENST00000630962 GNB1P62873 340 aa3.04□□□□□ -1.92
SRP54-214ENST00000630962 ARF1P84077 181 aaKnown RBP3.04□□□□□ -1.92
SRP54-214ENST00000630962 ZC2HC1BQ5TFG8 222 aa3.04□□□□□ -1.92
SRP54-214ENST00000630962 ADALQ6DHV7 355 aa3.04□□□□□ -1.92
SRP54-214ENST00000630962 KRTAP5-11Q6L8G4 156 aa3.04□□□□□ -1.92
SRP54-214ENST00000630962 IKBIPQ70UQ0 350 aa3.04□□□□□ -1.92
SRP54-214ENST00000630962 PLD3Q8IV08 490 aa3.04□□□□□ -1.92
SRP54-214ENST00000630962 ZNF485Q8NCK3 441 aa3.04□□□□□ -1.92
SRP54-214ENST00000630962 DDHD1Q8NEL9 900 aa3.04□□□□□ -1.92
SRP54-214ENST00000630962 OR2T12Q8NG77 320 aa3.04□□□□□ -1.92
SRP54-214ENST00000630962 ZKSCAN4Q969J2 545 aaPredicted RBP3.04□□□□□ -1.92
SRP54-214ENST00000630962 MTERF3Q96E29 417 aa3.04□□□□□ -1.92
SRP54-214ENST00000630962 TIGD1Q96MW7 591 aa3.04□□□□□ -1.92
SRP54-214ENST00000630962 GFI1Q99684 422 aa3.04□□□□□ -1.92
SRP54-214ENST00000630962 NAP1L4Q99733 375 aaKnown RBP3.04□□□□□ -1.92
SRP54-214ENST00000630962 PLK3Q9H4B4 646 aa3.04□□□□□ -1.92
SRP54-214ENST00000630962 KRT84Q9NSB2 600 aa3.04□□□□□ -1.92
SRP54-214ENST00000630962 CORO1CQ9ULV4 474 aaPredicted RBP3.04□□□□□ -1.92
SRP54-214ENST00000630962 PIAS3Q9Y6X2 628 aa3.04□□□□□ -1.92
SRP54-214ENST00000630962 RUSC2Q8N2Y8 1516 aa3.03□□□□□ -1.92
SRP54-214ENST00000630962 GIMAP1-GIMAP5A0A087WTJ2 511 aa3.03□□□□□ -1.92
SRP54-214ENST00000630962 ELOVL7A1L3X0 281 aa3.03□□□□□ -1.92
SRP54-214ENST00000630962 FRMD3A2A2Y4 597 aa3.03□□□□□ -1.92
SRP54-214ENST00000630962 C5orf60A6NFR6 353 aa3.03□□□□□ -1.92
SRP54-214ENST00000630962 LRRC72A6NJI9 287 aa3.03□□□□□ -1.92
SRP54-214ENST00000630962 A6NL46 340 aa3.03□□□□□ -1.92
SRP54-214ENST00000630962 DUXAA6NLW8 204 aa3.03□□□□□ -1.92
SRP54-214ENST00000630962 TMEM189-UBE2V1I3L0A0 370 aa3.03□□□□□ -1.92
SRP54-214ENST00000630962 NR5A2O00482 541 aa3.03□□□□□ -1.92
SRP54-214ENST00000630962 KCNK5O95279 499 aa3.03□□□□□ -1.92
SRP54-214ENST00000630962 TSHBP01222 138 aa3.03□□□□□ -1.92
SRP54-214ENST00000630962 PON1P27169 355 aa3.03□□□□□ -1.92
SRP54-214ENST00000630962 LUMP51884 338 aaPredicted RBP3.03□□□□□ -1.92
SRP54-214ENST00000630962 NAP1L1P55209 391 aaKnown RBP3.03□□□□□ -1.92
SRP54-214ENST00000630962 CDH8P55286 799 aa3.03□□□□□ -1.92
SRP54-214ENST00000630962 SNRPEP62304 92 aaKnown RBP3.03□□□□□ -1.92
SRP54-214ENST00000630962 UBE2V1Q13404 147 aa3.03□□□□□ -1.92
SRP54-214ENST00000630962 TUBB2AQ13885 445 aa3.03□□□□□ -1.92
SRP54-214ENST00000630962 KCNC3Q14003 757 aa3.03□□□□□ -1.92
SRP54-214ENST00000630962 TEAD2Q15562 447 aa3.03□□□□□ -1.92
SRP54-214ENST00000630962 GCNT6Q5T4J0 391 aa3.03□□□□□ -1.92
SRP54-214ENST00000630962 ZNF772Q68DY9 489 aaPredicted RBP3.03□□□□□ -1.92
SRP54-214ENST00000630962 LINGO4Q6UY18 593 aa3.03□□□□□ -1.92
SRP54-214ENST00000630962 C15orf39Q6ZRI6 1047 aa3.03□□□□□ -1.92
SRP54-214ENST00000630962 MFSD6Q6ZSS7 791 aa3.03□□□□□ -1.92
SRP54-214ENST00000630962 STXBP4Q6ZWJ1 553 aa3.03□□□□□ -1.92
SRP54-214ENST00000630962 ISCA2Q86U28 154 aa3.03□□□□□ -1.92
SRP54-214ENST00000630962 RPAP2Q8IXW5 612 aaPredicted RBP3.03□□□□□ -1.92
SRP54-214ENST00000630962 ADGRF2Q8IZF7 708 aa3.03□□□□□ -1.92
SRP54-214ENST00000630962 MRGPRDQ8TDS7 321 aa3.03□□□□□ -1.92
SRP54-214ENST00000630962 FCAMRQ8WWV6 532 aa3.03□□□□□ -1.92
SRP54-214ENST00000630962 USP6NLQ92738 828 aa3.03□□□□□ -1.92
SRP54-214ENST00000630962 GIMAP5Q96F15 307 aa3.03□□□□□ -1.92
SRP54-214ENST00000630962 ELMOD3Q96FG2 381 aa3.03□□□□□ -1.92
SRP54-214ENST00000630962 MPP4Q96JB8 637 aa3.03□□□□□ -1.92
SRP54-214ENST00000630962 SGK494Q96LW2 274 aa3.03□□□□□ -1.92
SRP54-214ENST00000630962 SLC22A12Q96S37 553 aa3.03□□□□□ -1.92
SRP54-214ENST00000630962 OPRPNQ99935 248 aaPredicted RBP3.03□□□□□ -1.92
SRP54-214ENST00000630962 RHNO1Q9BSD3 238 aa3.03□□□□□ -1.92
SRP54-214ENST00000630962 TUBB2BQ9BVA1 445 aa3.03□□□□□ -1.92
SRP54-214ENST00000630962 SMARCAD1Q9H4L7 1026 aa3.03□□□□□ -1.92
SRP54-214ENST00000630962 EIF2B3Q9NR50 452 aaKnown RBP3.03□□□□□ -1.92
SRP54-214ENST00000630962 MIOSQ9NXC5 875 aa3.03□□□□□ -1.92
SRP54-214ENST00000630962 DNAJB4Q9UDY4 337 aa3.03□□□□□ -1.92
SRP54-214ENST00000630962 PNMA2Q9UL42 364 aa3.03□□□□□ -1.92
SRP54-214ENST00000630962 KCNJ14Q9UNX9 436 aa3.03□□□□□ -1.92
SRP54-214ENST00000630962 COL2A1P02458 1487 aaPredicted RBP3.03□□□□□ -1.93
SRP54-214ENST00000630962 A0A1W2PN81 502 aa3.02□□□□□ -1.93
SRP54-214ENST00000630962 PI4KAP2A4QPH2 592 aa3.02□□□□□ -1.93
SRP54-214ENST00000630962 PLK4O00444 970 aa3.02□□□□□ -1.93
SRP54-214ENST00000630962 PLPP2O43688 288 aa3.02□□□□□ -1.93
SRP54-214ENST00000630962 RB1P06400 928 aa3.02□□□□□ -1.93
SRP54-214ENST00000630962 ZNF883P0CG24 379 aa3.02□□□□□ -1.93
SRP54-214ENST00000630962 SELLP14151 372 aa3.02□□□□□ -1.93
SRP54-214ENST00000630962 CKMT2P17540 419 aa3.02□□□□□ -1.93
SRP54-214ENST00000630962 CHRNA7P36544 502 aa3.02□□□□□ -1.93
SRP54-214ENST00000630962 PSMB10P40306 273 aa3.02□□□□□ -1.93
SRP54-214ENST00000630962 ARSEP51690 589 aa3.02□□□□□ -1.93
SRP54-214ENST00000630962 MRPS5P82675 430 aaKnown RBP3.02□□□□□ -1.93
SRP54-214ENST00000630962 KRT32Q14532 448 aa3.02□□□□□ -1.93
SRP54-214ENST00000630962 NR1D2Q14995 579 aa3.02□□□□□ -1.93
SRP54-214ENST00000630962 ASTE1Q2TB18 679 aaPredicted RBP3.02□□□□□ -1.93
SRP54-214ENST00000630962 HAUS3Q68CZ6 603 aa3.02□□□□□ -1.93
SRP54-214ENST00000630962 ZNF790Q6PG37 636 aa3.02□□□□□ -1.93
SRP54-214ENST00000630962 CFAP77Q6ZQR2 320 aa3.02□□□□□ -1.93
SRP54-214ENST00000630962 SH2D5Q6ZV89 423 aa3.02□□□□□ -1.93
SRP54-214ENST00000630962 ANO5Q75V66 913 aa3.02□□□□□ -1.93
SRP54-214ENST00000630962 RSRC2Q7L4I2 434 aaKnown RBP3.02□□□□□ -1.93
SRP54-214ENST00000630962 ZNF554Q86TJ5 538 aa3.02□□□□□ -1.93
SRP54-214ENST00000630962 GALNT13Q8IUC8 556 aa3.02□□□□□ -1.93
SRP54-214ENST00000630962 CEP97Q8IW35 865 aa3.02□□□□□ -1.93
SRP54-214ENST00000630962 LSMEM2Q8N112 164 aa3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms