RNA–Protein interactions for RNA: ENST00000629913.2

TREX1-206, Transcript of three prime repair exonuclease 1, humanhuman

APPRIS P1 BASIC

Gene TREX1, Length 945 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-206ENST00000629913 ZSCAN1Q8NBB4 408 aa13.4□□□□□ -0.26
TREX1-206ENST00000629913 OR2L2Q8NH16 312 aa13.4□□□□□ -0.26
TREX1-206ENST00000629913 NAT14Q8WUY8 206 aa13.4□□□□□ -0.26
TREX1-206ENST00000629913 ULK4Q96C45 1275 aa13.4□□□□□ -0.26
TREX1-206ENST00000629913 LINC00615Q96LM1 132 aaPredicted RBP13.4□□□□□ -0.26
TREX1-206ENST00000629913 TMEM121Q9BTD3 319 aa13.4□□□□□ -0.26
TREX1-206ENST00000629913 TSGA10Q9BZW7 698 aa13.4□□□□□ -0.26
TREX1-206ENST00000629913 RAB33BQ9H082 229 aa13.4□□□□□ -0.26
TREX1-206ENST00000629913 ZNF768Q9H5H4 540 aaKnown RBP13.4□□□□□ -0.26
TREX1-206ENST00000629913 LRRC40Q9H9A6 602 aa13.4□□□□□ -0.26
TREX1-206ENST00000629913 EPHA6Q9UF33 1036 aa13.4□□□□□ -0.26
TREX1-206ENST00000629913 CRLS1Q9UJA2 301 aa13.4□□□□□ -0.26
TREX1-206ENST00000629913 PSMD13Q9UNM6 376 aa13.4□□□□□ -0.26
TREX1-206ENST00000629913 BOD1L1Q8NFC6 3051 aa13.4□□□□□ -0.26
TREX1-206ENST00000629913 HELZ2Q9BYK8 2649 aaKnown RBP13.39□□□□□ -0.27
TREX1-206ENST00000629913 GOLGA6L6A8MZA4 724 aa13.39□□□□□ -0.27
TREX1-206ENST00000629913 CCL22O00626 93 aa13.39□□□□□ -0.27
TREX1-206ENST00000629913 POLR1CO15160 346 aaPredicted RBP13.39□□□□□ -0.27
TREX1-206ENST00000629913 AP2A1O95782 977 aa13.39□□□□□ -0.27
TREX1-206ENST00000629913 MTHFD1P11586 935 aaKnown RBP13.39□□□□□ -0.27
TREX1-206ENST00000629913 LIFP15018 202 aa13.39□□□□□ -0.27
TREX1-206ENST00000629913 PRLHRP49683 370 aa13.39□□□□□ -0.27
TREX1-206ENST00000629913 LINC00303Q3SY05 128 aa13.39□□□□□ -0.27
TREX1-206ENST00000629913 SNX20Q7Z614 316 aa13.39□□□□□ -0.27
TREX1-206ENST00000629913 ATG4AQ8WYN0 398 aa13.39□□□□□ -0.27
TREX1-206ENST00000629913 MED8Q96G25 268 aa13.39□□□□□ -0.27
TREX1-206ENST00000629913 DCUN1D1Q96GG9 259 aa13.39□□□□□ -0.27
TREX1-206ENST00000629913 DNAJC1Q96KC8 554 aaKnown RBP13.39□□□□□ -0.27
TREX1-206ENST00000629913 IMP3Q9NV31 184 aaKnown RBP13.39□□□□□ -0.27
TREX1-206ENST00000629913 ACSL5Q9ULC5 683 aa13.39□□□□□ -0.27
TREX1-206ENST00000629913 TMEM184BQ9Y519 407 aaPredicted RBP13.39□□□□□ -0.27
TREX1-206ENST00000629913 COL6A6A6NMZ7 2263 aa13.39□□□□□ -0.27
TREX1-206ENST00000629913 BSNQ9UPA5 3926 aa13.38□□□□□ -0.27
TREX1-206ENST00000629913 IGLV3-16A0A075B6K0 115 aa13.38□□□□□ -0.27
TREX1-206ENST00000629913 TRBV5-4A0A0C4DH59 114 aa13.38□□□□□ -0.27
TREX1-206ENST00000629913 H7C0S8 307 aa13.38□□□□□ -0.27
TREX1-206ENST00000629913 KIF1CO43896 1103 aaKnown RBP13.38□□□□□ -0.27
TREX1-206ENST00000629913 RASSF9O75901 435 aa13.38□□□□□ -0.27
TREX1-206ENST00000629913 STK17BO94768 372 aa13.38□□□□□ -0.27
TREX1-206ENST00000629913 DLGAP3O95886 979 aa13.38□□□□□ -0.27
TREX1-206ENST00000629913 RALBP11234 206 aa13.38□□□□□ -0.27
TREX1-206ENST00000629913 MC4RP32245 332 aa13.38□□□□□ -0.27
TREX1-206ENST00000629913 SEPHS1P49903 392 aa13.38□□□□□ -0.27
TREX1-206ENST00000629913 GSDMDP57764 484 aa13.38□□□□□ -0.27
TREX1-206ENST00000629913 PPP1CAP62136 330 aa13.38□□□□□ -0.27
TREX1-206ENST00000629913 CYP4F2P78329 520 aa13.38□□□□□ -0.27
TREX1-206ENST00000629913 OASLQ15646 514 aaKnown RBP13.38□□□□□ -0.27
TREX1-206ENST00000629913 GPR33Q49SQ1 333 aa13.38□□□□□ -0.27
TREX1-206ENST00000629913 IRGCQ6NXR0 463 aa13.38□□□□□ -0.27
TREX1-206ENST00000629913 DUS1LQ6P1R4 473 aaKnown RBP13.38□□□□□ -0.27
TREX1-206ENST00000629913 TIPARPQ7Z3E1 657 aaKnown RBP13.38□□□□□ -0.27
TREX1-206ENST00000629913 NLGN4XQ8N0W4 816 aa13.38□□□□□ -0.27
TREX1-206ENST00000629913 NLGN4YQ8NFZ3 816 aaPredicted RBP13.38□□□□□ -0.27
TREX1-206ENST00000629913 HM13Q8TCT9 377 aa13.38□□□□□ -0.27
TREX1-206ENST00000629913 HEXDCQ8WVB3 486 aa13.38□□□□□ -0.27
TREX1-206ENST00000629913 UBE2Q2Q8WVN8 375 aa13.38□□□□□ -0.27
TREX1-206ENST00000629913 KLHL6Q8WZ60 621 aa13.38□□□□□ -0.27
TREX1-206ENST00000629913 EXTL1Q92935 676 aa13.38□□□□□ -0.27
TREX1-206ENST00000629913 ZDHHC12Q96GR4 267 aa13.38□□□□□ -0.27
TREX1-206ENST00000629913 INSM2Q96T92 566 aaPredicted RBP13.38□□□□□ -0.27
TREX1-206ENST00000629913 COPS8Q99627 209 aa13.38□□□□□ -0.27
TREX1-206ENST00000629913 SLC12A9Q9BXP2 914 aa13.38□□□□□ -0.27
TREX1-206ENST00000629913 WWP1Q9H0M0 922 aa13.38□□□□□ -0.27
TREX1-206ENST00000629913 FAM96AQ9H5X1 160 aa13.38□□□□□ -0.27
TREX1-206ENST00000629913 NLE1Q9NVX2 485 aaPredicted RBP13.38□□□□□ -0.27
TREX1-206ENST00000629913 SEMA5BQ9P283 1151 aa13.38□□□□□ -0.27
TREX1-206ENST00000629913 FAM8A1Q9UBU6 413 aa13.38□□□□□ -0.27
TREX1-206ENST00000629913 CFAP20Q9Y6A4 193 aaKnown RBP13.38□□□□□ -0.27
TREX1-206ENST00000629913 CFAP99D6REC4 459 aa13.37□□□□□ -0.27
TREX1-206ENST00000629913 LIASO43766 372 aa13.37□□□□□ -0.27
TREX1-206ENST00000629913 KRT86O43790 486 aa13.37□□□□□ -0.27
TREX1-206ENST00000629913 SLC35G4P0C7Q5 338 aa13.37□□□□□ -0.27
TREX1-206ENST00000629913 ATP1B2P14415 290 aaPredicted RBP13.37□□□□□ -0.27
TREX1-206ENST00000629913 TPH1P17752 444 aa13.37□□□□□ -0.27
TREX1-206ENST00000629913 ACRV1P26436 265 aa13.37□□□□□ -0.27
TREX1-206ENST00000629913 MAP4P27816 1152 aaKnown RBP13.37□□□□□ -0.27
TREX1-206ENST00000629913 SH3BP2P78314 561 aa13.37□□□□□ -0.27
TREX1-206ENST00000629913 FOXM1Q08050 763 aa13.37□□□□□ -0.27
TREX1-206ENST00000629913 SEPT6Q14141 434 aa13.37□□□□□ -0.27
TREX1-206ENST00000629913 POU6F1Q14863 301 aa13.37□□□□□ -0.27
TREX1-206ENST00000629913 PLCL1Q15111 1095 aa13.37□□□□□ -0.27
TREX1-206ENST00000629913 SEL1L2Q5TEA6 688 aa13.37□□□□□ -0.27
TREX1-206ENST00000629913 CACHD1Q5VU97 1274 aa13.37□□□□□ -0.27
TREX1-206ENST00000629913 KLHL35Q6PF15 583 aa13.37□□□□□ -0.27
TREX1-206ENST00000629913 FAM92BQ6ZTR7 304 aa13.37□□□□□ -0.27
TREX1-206ENST00000629913 MICALCLQ6ZW33 695 aa13.37□□□□□ -0.27
TREX1-206ENST00000629913 SLC13A5Q86YT5 568 aaPredicted RBP13.37□□□□□ -0.27
TREX1-206ENST00000629913 TAB3Q8N5C8 712 aaPredicted RBP13.37□□□□□ -0.27
TREX1-206ENST00000629913 LILRA3Q8N6C8 439 aaPredicted RBP13.37□□□□□ -0.27
TREX1-206ENST00000629913 EXD3Q8N9H8 876 aa13.37□□□□□ -0.27
TREX1-206ENST00000629913 SPDYE1Q8NFV5 336 aaPredicted RBP13.37□□□□□ -0.27
TREX1-206ENST00000629913 RMDN2Q96LZ7 410 aa13.37□□□□□ -0.27
TREX1-206ENST00000629913 C12orf66Q96MD2 445 aa13.37□□□□□ -0.27
TREX1-206ENST00000629913 FRMD8P1Q9BZ68 369 aaPredicted RBP13.37□□□□□ -0.27
TREX1-206ENST00000629913 PIH1D1Q9NWS0 290 aaKnown RBP13.37□□□□□ -0.27
TREX1-206ENST00000629913 ZDHHC3Q9NYG2 299 aa13.37□□□□□ -0.27
TREX1-206ENST00000629913 GUCA1BQ9UMX6 200 aa13.37□□□□□ -0.27
TREX1-206ENST00000629913 OR5K3A6NET4 321 aa13.36□□□□□ -0.27
TREX1-206ENST00000629913 MROH6A6NGR9 719 aa13.36□□□□□ -0.27
TREX1-206ENST00000629913 ERI2A8K979 691 aaKnown RBP13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms