RNA–Protein interactions for RNA: ENST00000629725.2

TARDBP-228, Transcript of TAR DNA binding protein, humanhuman

TSL 5 BASIC

Gene TARDBP, Length 1,031 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-228ENST00000629725 SOHLH2Q9NX45 425 aa19.65■□□□□ 0.74
TARDBP-228ENST00000629725 B3GNT3Q9Y2A9 372 aa19.65■□□□□ 0.74
TARDBP-228ENST00000629725 SKILP12757 684 aa19.64■□□□□ 0.73
TARDBP-228ENST00000629725 GJC1P36383 396 aa19.64■□□□□ 0.73
TARDBP-228ENST00000629725 SLC10A2Q12908 348 aaPredicted RBP19.64■□□□□ 0.73
TARDBP-228ENST00000629725 ZBTB17Q13105 803 aa19.64■□□□□ 0.73
TARDBP-228ENST00000629725 PCSK7Q16549 785 aa19.64■□□□□ 0.73
TARDBP-228ENST00000629725 VWA5B1Q5TIE3 1220 aa19.64■□□□□ 0.73
TARDBP-228ENST00000629725 CARFQ8N187 725 aa19.64■□□□□ 0.73
TARDBP-228ENST00000629725 RANBP9Q96S59 729 aa19.64■□□□□ 0.73
TARDBP-228ENST00000629725 XPO4Q9C0E2 1151 aaKnown RBP19.64■□□□□ 0.73
TARDBP-228ENST00000629725 THAP2Q9H0W7 228 aa19.64■□□□□ 0.73
TARDBP-228ENST00000629725 IGSF5Q9NSI5 407 aa19.64■□□□□ 0.73
TARDBP-228ENST00000629725 IMP3Q9NV31 184 aaKnown RBP19.64■□□□□ 0.73
TARDBP-228ENST00000629725 SRPK3Q9UPE1 567 aa19.64■□□□□ 0.73
TARDBP-228ENST00000629725 SEC16AO15027 2179 aa19.63■□□□□ 0.73
TARDBP-228ENST00000629725 MYO1FO00160 1098 aa19.63■□□□□ 0.73
TARDBP-228ENST00000629725 POP7O75817 140 aaKnown RBP19.63■□□□□ 0.73
TARDBP-228ENST00000629725 POU3F2P20265 443 aaPredicted RBP19.63■□□□□ 0.73
TARDBP-228ENST00000629725 RORAP35398 523 aa19.63■□□□□ 0.73
TARDBP-228ENST00000629725 CDK18Q07002 472 aa19.63■□□□□ 0.73
TARDBP-228ENST00000629725 ABRQ12979 859 aa19.63■□□□□ 0.73
TARDBP-228ENST00000629725 ATP1A4Q13733 1029 aa19.63■□□□□ 0.73
TARDBP-228ENST00000629725 PDK2Q15119 407 aa19.63■□□□□ 0.73
TARDBP-228ENST00000629725 KYNUQ16719 465 aa19.63■□□□□ 0.73
TARDBP-228ENST00000629725 ARMC6Q6NXE6 501 aa19.63■□□□□ 0.73
TARDBP-228ENST00000629725 NT5DC3Q86UY8 548 aa19.63■□□□□ 0.73
TARDBP-228ENST00000629725 MAP7D3Q8IWC1 876 aa19.63■□□□□ 0.73
TARDBP-228ENST00000629725 IMP4Q96G21 291 aaKnown RBP19.63■□□□□ 0.73
TARDBP-228ENST00000629725 ZNF830Q96NB3 372 aaPredicted RBP19.63■□□□□ 0.73
TARDBP-228ENST00000629725 TLR10Q9BXR5 811 aa19.63■□□□□ 0.73
TARDBP-228ENST00000629725 BPIFA1Q9NP55 256 aa19.63■□□□□ 0.73
TARDBP-228ENST00000629725 ANO10Q9NW15 660 aa19.63■□□□□ 0.73
TARDBP-228ENST00000629725 TMEM63CQ9P1W3 806 aa19.63■□□□□ 0.73
TARDBP-228ENST00000629725 BTRCQ9Y297 605 aa19.63■□□□□ 0.73
TARDBP-228ENST00000629725 CFAP20Q9Y6A4 193 aaKnown RBP19.63■□□□□ 0.73
TARDBP-228ENST00000629725 PCSK5Q92824 1860 aa19.62■□□□□ 0.73
TARDBP-228ENST00000629725 DIDO1Q9BTC0 2240 aaKnown RBP19.62■□□□□ 0.73
TARDBP-228ENST00000629725 F5H423 210 aaPredicted RBP19.62■□□□□ 0.73
TARDBP-228ENST00000629725 AURKAO14965 403 aa19.62■□□□□ 0.73
TARDBP-228ENST00000629725 CAPN1P07384 714 aa19.62■□□□□ 0.73
TARDBP-228ENST00000629725 MTHFD1P11586 935 aaKnown RBP19.62■□□□□ 0.73
TARDBP-228ENST00000629725 KPNA2P52292 529 aaKnown RBP19.62■□□□□ 0.73
TARDBP-228ENST00000629725 IFI35P80217 286 aaPredicted RBP19.62■□□□□ 0.73
TARDBP-228ENST00000629725 PPIDQ08752 370 aaKnown RBP19.62■□□□□ 0.73
TARDBP-228ENST00000629725 XRCC4Q13426 336 aa19.62■□□□□ 0.73
TARDBP-228ENST00000629725 NFE2L1Q14494 772 aa19.62■□□□□ 0.73
TARDBP-228ENST00000629725 LYPLAL1Q5VWZ2 237 aa19.62■□□□□ 0.73
TARDBP-228ENST00000629725 SASS6Q6UVJ0 657 aa19.62■□□□□ 0.73
TARDBP-228ENST00000629725 FAM198BQ6UWH4 519 aa19.62■□□□□ 0.73
TARDBP-228ENST00000629725 FAM83HQ6ZRV2 1179 aaPredicted RBP19.62■□□□□ 0.73
TARDBP-228ENST00000629725 SYTL1Q8IYJ3 562 aa19.62■□□□□ 0.73
TARDBP-228ENST00000629725 PQLC3Q8N755 202 aa19.62■□□□□ 0.73
TARDBP-228ENST00000629725 FAF2Q96CS3 445 aa19.62■□□□□ 0.73
TARDBP-228ENST00000629725 SRPK1Q96SB4 655 aaKnown RBP19.62■□□□□ 0.73
TARDBP-228ENST00000629725 ZCCHC2Q9C0B9 1178 aaKnown RBP19.62■□□□□ 0.73
TARDBP-228ENST00000629725 ILKAPQ9H0C8 392 aaPredicted RBP19.62■□□□□ 0.73
TARDBP-228ENST00000629725 CBX8Q9HC52 389 aa19.62■□□□□ 0.73
TARDBP-228ENST00000629725 PCMTD2Q9NV79 361 aa19.62■□□□□ 0.73
TARDBP-228ENST00000629725 OR6C74A6NCV1 312 aa19.61■□□□□ 0.73
TARDBP-228ENST00000629725 DDX3YO15523 660 aaKnown RBP19.61■□□□□ 0.73
TARDBP-228ENST00000629725 FAM182AQ5T1J6 154 aa19.61■□□□□ 0.73
TARDBP-228ENST00000629725 CCDC70Q6NSX1 233 aa19.61■□□□□ 0.73
TARDBP-228ENST00000629725 FBXO38Q6PIJ6 1188 aa19.61■□□□□ 0.73
TARDBP-228ENST00000629725 RBM43Q6ZSC3 357 aaKnown RBP19.61■□□□□ 0.73
TARDBP-228ENST00000629725 RAB43Q86YS6 212 aa19.61■□□□□ 0.73
TARDBP-228ENST00000629725 RASGEF1AQ8N9B8 481 aa19.61■□□□□ 0.73
TARDBP-228ENST00000629725 ZFPM2Q8WW38 1151 aa19.61■□□□□ 0.73
TARDBP-228ENST00000629725 PPM1MQ96MI6 270 aa19.61■□□□□ 0.73
TARDBP-228ENST00000629725 AGAP3Q96P47 875 aa19.61■□□□□ 0.73
TARDBP-228ENST00000629725 CEP41Q9BYV8 373 aa19.61■□□□□ 0.73
TARDBP-228ENST00000629725 ACTR5Q9H9F9 607 aaPredicted RBP19.61■□□□□ 0.73
TARDBP-228ENST00000629725 RTN4Q9NQC3 1192 aaKnown RBP19.61■□□□□ 0.73
TARDBP-228ENST00000629725 COPG1Q9Y678 874 aaKnown RBP19.61■□□□□ 0.73
TARDBP-228ENST00000629725 DNMT3AQ9Y6K1 912 aaPredicted RBP19.61■□□□□ 0.73
TARDBP-228ENST00000629725 MDC1Q14676 2089 aaKnown RBP19.61■□□□□ 0.73
TARDBP-228ENST00000629725 CROCCQ5TZA2 2017 aa19.61■□□□□ 0.73
TARDBP-228ENST00000629725 POLEQ07864 2286 aa19.6■□□□□ 0.73
TARDBP-228ENST00000629725 CCDC88CQ9P219 2028 aa19.6■□□□□ 0.73
TARDBP-228ENST00000629725 OR2AG2A6NM03 316 aa19.6■□□□□ 0.73
TARDBP-228ENST00000629725 LCA5LO95447 670 aa19.6■□□□□ 0.73
TARDBP-228ENST00000629725 ALPPP05187 535 aa19.6■□□□□ 0.73
TARDBP-228ENST00000629725 HMGCLP35914 325 aa19.6■□□□□ 0.73
TARDBP-228ENST00000629725 ARCN1P48444 511 aaKnown RBP19.6■□□□□ 0.73
TARDBP-228ENST00000629725 CTSCP53634 463 aa19.6■□□□□ 0.73
TARDBP-228ENST00000629725 NCF4Q15080 339 aa19.6■□□□□ 0.73
TARDBP-228ENST00000629725 METRNLQ641Q3 311 aa19.6■□□□□ 0.73
TARDBP-228ENST00000629725 TMEM220Q6QAJ8 160 aa19.6■□□□□ 0.73
TARDBP-228ENST00000629725 INSM2Q96T92 566 aaPredicted RBP19.6■□□□□ 0.73
TARDBP-228ENST00000629725 SLC7A5P2Q9GIP4 190 aa19.6■□□□□ 0.73
TARDBP-228ENST00000629725 SLC24A2Q9UI40 661 aa19.6■□□□□ 0.73
TARDBP-228ENST00000629725 PADI2Q9Y2J8 665 aa19.6■□□□□ 0.73
TARDBP-228ENST00000629725 SPO11Q9Y5K1 396 aa19.6■□□□□ 0.73
TARDBP-228ENST00000629725 CELSR1Q9NYQ6 3014 aa19.59■□□□□ 0.73
TARDBP-228ENST00000629725 SLC9B1P1A6NJY1 282 aa19.59■□□□□ 0.73
TARDBP-228ENST00000629725 TMEM150CB9EJG8 249 aa19.59■□□□□ 0.73
TARDBP-228ENST00000629725 CYP1A2P05177 515 aa19.59■□□□□ 0.73
TARDBP-228ENST00000629725 CYP2A7P20853 494 aa19.59■□□□□ 0.73
TARDBP-228ENST00000629725 CDH3P22223 829 aa19.59■□□□□ 0.73
TARDBP-228ENST00000629725 PBLDP30039 288 aaPredicted RBP19.59■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms