RNA–Protein interactions for RNA: ENST00000627002.1

PTP4A1-206, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 5 BASIC

Gene PTP4A1, Length 447 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-206ENST00000627002 TSNQ15631 228 aaKnown RBP7.42□□□□□ -1.22
PTP4A1-206ENST00000627002 WSCD2Q2TBF2 565 aa7.42□□□□□ -1.22
PTP4A1-206ENST00000627002 SYTL3Q4VX76 610 aa7.42□□□□□ -1.22
PTP4A1-206ENST00000627002 TMEM259Q4ZIN3 620 aa7.42□□□□□ -1.22
PTP4A1-206ENST00000627002 CDKL4Q5MAI5 379 aa7.42□□□□□ -1.22
PTP4A1-206ENST00000627002 CES4AQ5XG92 561 aa7.42□□□□□ -1.22
PTP4A1-206ENST00000627002 TBC1D3GQ6DHY5 549 aa7.42□□□□□ -1.22
PTP4A1-206ENST00000627002 TBC1D3CQ6IPX1 549 aa7.42□□□□□ -1.22
PTP4A1-206ENST00000627002 CGB2Q6NT52 195 aa7.42□□□□□ -1.22
PTP4A1-206ENST00000627002 PNCKQ6P2M8 343 aa7.42□□□□□ -1.22
PTP4A1-206ENST00000627002 TMEM220Q6QAJ8 160 aa7.42□□□□□ -1.22
PTP4A1-206ENST00000627002 KIAA1324Q6UXG2 1013 aaKnown RBP7.42□□□□□ -1.22
PTP4A1-206ENST00000627002 TRIM67Q6ZTA4 783 aa7.42□□□□□ -1.22
PTP4A1-206ENST00000627002 NEK10Q6ZWH5 1172 aa7.42□□□□□ -1.22
PTP4A1-206ENST00000627002 SYT13Q7L8C5 426 aa7.42□□□□□ -1.22
PTP4A1-206ENST00000627002 HORMAD1Q86X24 394 aa7.42□□□□□ -1.22
PTP4A1-206ENST00000627002 WDR75Q8IWA0 830 aaKnown RBP7.42□□□□□ -1.22
PTP4A1-206ENST00000627002 UBALD2Q8IYN6 164 aa7.42□□□□□ -1.22
PTP4A1-206ENST00000627002 TBC1D3Q8IZP1 549 aaPredicted RBP7.42□□□□□ -1.22
PTP4A1-206ENST00000627002 GJD3Q8N144 294 aa7.42□□□□□ -1.22
PTP4A1-206ENST00000627002 FBXO39Q8N4B4 442 aa7.42□□□□□ -1.22
PTP4A1-206ENST00000627002 CCNYL1Q8N7R7 359 aa7.42□□□□□ -1.22
PTP4A1-206ENST00000627002 RASGEF1AQ8N9B8 481 aa7.42□□□□□ -1.22
PTP4A1-206ENST00000627002 PIWIL2Q8TC59 973 aaKnown RBP7.42□□□□□ -1.22
PTP4A1-206ENST00000627002 LKAAEAR1Q8TD35 194 aa7.42□□□□□ -1.22
PTP4A1-206ENST00000627002 ASZ1Q8WWH4 475 aa7.42□□□□□ -1.22
PTP4A1-206ENST00000627002 FUBP1Q96AE4 644 aaKnown RBP7.42□□□□□ -1.22
PTP4A1-206ENST00000627002 PHF21BQ96EK2 531 aa7.42□□□□□ -1.22
PTP4A1-206ENST00000627002 L3HYPDHQ96EM0 354 aa7.42□□□□□ -1.22
PTP4A1-206ENST00000627002 COX14Q96I36 57 aa7.42□□□□□ -1.22
PTP4A1-206ENST00000627002 HIC2Q96JB3 615 aa7.42□□□□□ -1.22
PTP4A1-206ENST00000627002 CCM2Q9BSQ5 444 aa7.42□□□□□ -1.22
PTP4A1-206ENST00000627002 TRMOQ9BU70 441 aa7.42□□□□□ -1.22
PTP4A1-206ENST00000627002 ERVK-6Q9BXR3 956 aa7.42□□□□□ -1.22
PTP4A1-206ENST00000627002 FAM126AQ9BYI3 521 aaPredicted RBP7.42□□□□□ -1.22
PTP4A1-206ENST00000627002 ILKAPQ9H0C8 392 aaPredicted RBP7.42□□□□□ -1.22
PTP4A1-206ENST00000627002 KCNH6Q9H252 994 aa7.42□□□□□ -1.22
PTP4A1-206ENST00000627002 STN1Q9H668 368 aaKnown RBP7.42□□□□□ -1.22
PTP4A1-206ENST00000627002 NPHS2Q9NP85 383 aa7.42□□□□□ -1.22
PTP4A1-206ENST00000627002 NUDT4Q9NZJ9 180 aa7.42□□□□□ -1.22
PTP4A1-206ENST00000627002 CD274Q9NZQ7 290 aa7.42□□□□□ -1.22
PTP4A1-206ENST00000627002 FBXL21Q9UKT6 434 aa7.42□□□□□ -1.22
PTP4A1-206ENST00000627002 CNOT6Q9ULM6 557 aaKnown RBP7.42□□□□□ -1.22
PTP4A1-206ENST00000627002 CA14Q9ULX7 337 aa7.42□□□□□ -1.22
PTP4A1-206ENST00000627002 GPR34Q9UPC5 381 aa7.42□□□□□ -1.22
PTP4A1-206ENST00000627002 ZFR2Q9UPR6 939 aaKnown RBP7.42□□□□□ -1.22
PTP4A1-206ENST00000627002 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.42□□□□□ -1.22
PTP4A1-206ENST00000627002 MTF2Q9Y483 593 aaPredicted RBP7.42□□□□□ -1.22
PTP4A1-206ENST00000627002 OARD1Q9Y530 152 aa7.42□□□□□ -1.22
PTP4A1-206ENST00000627002 USH1CQ9Y6N9 552 aa7.42□□□□□ -1.22
PTP4A1-206ENST00000627002 ZNF106Q9H2Y7 1883 aaKnown RBP7.42□□□□□ -1.22
PTP4A1-206ENST00000627002 ANKRD36A6QL64 1941 aa7.42□□□□□ -1.22
PTP4A1-206ENST00000627002 TICRRQ7Z2Z1 1910 aa7.42□□□□□ -1.22
PTP4A1-206ENST00000627002 REV3LO60673 3130 aa7.42□□□□□ -1.22
PTP4A1-206ENST00000627002 C17orf113A0A1B0GUU1 675 aa7.41□□□□□ -1.22
PTP4A1-206ENST00000627002 A0A1W2PQU0 124 aa7.41□□□□□ -1.22
PTP4A1-206ENST00000627002 KLHL33A6NCF5 533 aa7.41□□□□□ -1.22
PTP4A1-206ENST00000627002 PABPN1LA6NDY0 278 aaKnown RBP7.41□□□□□ -1.22
PTP4A1-206ENST00000627002 LRRC72A6NJI9 287 aa7.41□□□□□ -1.22
PTP4A1-206ENST00000627002 OR2AG2A6NM03 316 aa7.41□□□□□ -1.22
PTP4A1-206ENST00000627002 SLCO1B7G3V0H7 640 aa7.41□□□□□ -1.22
PTP4A1-206ENST00000627002 STX16-NPEPL1H3BU86 382 aa7.41□□□□□ -1.22
PTP4A1-206ENST00000627002 K7ESM1 405 aa7.41□□□□□ -1.22
PTP4A1-206ENST00000627002 UBXN8O00124 270 aa7.41□□□□□ -1.22
PTP4A1-206ENST00000627002 STX16O14662 325 aa7.41□□□□□ -1.22
PTP4A1-206ENST00000627002 LIN7AO14910 233 aaPredicted RBP7.41□□□□□ -1.22
PTP4A1-206ENST00000627002 SLC16A5O15375 505 aa7.41□□□□□ -1.22
PTP4A1-206ENST00000627002 ITM2AO43736 263 aa7.41□□□□□ -1.22
PTP4A1-206ENST00000627002 SGTAO43765 313 aa7.41□□□□□ -1.22
PTP4A1-206ENST00000627002 KLK8O60259 260 aa7.41□□□□□ -1.22
PTP4A1-206ENST00000627002 DCTN3O75935 186 aa7.41□□□□□ -1.22
PTP4A1-206ENST00000627002 C8GP07360 202 aa7.41□□□□□ -1.22
PTP4A1-206ENST00000627002 ENO2P09104 434 aaPredicted RBP7.41□□□□□ -1.22
PTP4A1-206ENST00000627002 MTHFD2P13995 350 aa7.41□□□□□ -1.22
PTP4A1-206ENST00000627002 GABRG2P18507 467 aa7.41□□□□□ -1.22
PTP4A1-206ENST00000627002 CD72P21854 359 aa7.41□□□□□ -1.22
PTP4A1-206ENST00000627002 TRIM23P36406 574 aa7.41□□□□□ -1.22
PTP4A1-206ENST00000627002 KCNC1P48547 511 aa7.41□□□□□ -1.22
PTP4A1-206ENST00000627002 ARFIP2P53365 341 aa7.41□□□□□ -1.22
PTP4A1-206ENST00000627002 ALDH18A1P54886 795 aaKnown RBP7.41□□□□□ -1.22
PTP4A1-206ENST00000627002 CDK3Q00526 305 aa7.41□□□□□ -1.22
PTP4A1-206ENST00000627002 HSPA14Q0VDF9 509 aa7.41□□□□□ -1.22
PTP4A1-206ENST00000627002 GALNT1Q10472 559 aaPredicted RBP7.41□□□□□ -1.22
PTP4A1-206ENST00000627002 OVGP1Q12889 678 aa7.41□□□□□ -1.22
PTP4A1-206ENST00000627002 PRKAA1Q13131 559 aa7.41□□□□□ -1.22
PTP4A1-206ENST00000627002 SP140Q13342 867 aa7.41□□□□□ -1.22
PTP4A1-206ENST00000627002 BOP1Q14137 746 aaKnown RBP7.41□□□□□ -1.22
PTP4A1-206ENST00000627002 TGFBIQ15582 683 aa7.41□□□□□ -1.22
PTP4A1-206ENST00000627002 PFKFB4Q16877 469 aa7.41□□□□□ -1.22
PTP4A1-206ENST00000627002 KHDC1Q4VXA5 237 aaKnown RBP7.41□□□□□ -1.22
PTP4A1-206ENST00000627002 ACSBG2Q5FVE4 666 aa7.41□□□□□ -1.22
PTP4A1-206ENST00000627002 ZNF678Q5SXM1 525 aa7.41□□□□□ -1.22
PTP4A1-206ENST00000627002 SEL1L3Q68CR1 1132 aa7.41□□□□□ -1.22
PTP4A1-206ENST00000627002 NAPRTQ6XQN6 538 aa7.41□□□□□ -1.22
PTP4A1-206ENST00000627002 CYHR1Q6ZMK1 362 aa7.41□□□□□ -1.22
PTP4A1-206ENST00000627002 FRMD7Q6ZUT3 714 aa7.41□□□□□ -1.22
PTP4A1-206ENST00000627002 ADGRG6Q86SQ4 1221 aa7.41□□□□□ -1.22
PTP4A1-206ENST00000627002 TRIM69Q86WT6 500 aa7.41□□□□□ -1.22
PTP4A1-206ENST00000627002 HEATR4Q86WZ0 1026 aa7.41□□□□□ -1.22
PTP4A1-206ENST00000627002 AFAP1L2Q8N4X5 818 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms