RNA–Protein interactions for RNA: ENST00000623007.3

LDB3-208, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,664 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-208ENST00000623007 PEX11AO75192 247 aa16.08■□□□□ 0.17
LDB3-208ENST00000623007 WDR47O94967 919 aa16.08■□□□□ 0.17
LDB3-208ENST00000623007 MATN4O95460 622 aa16.08■□□□□ 0.17
LDB3-208ENST00000623007 JUNP05412 331 aaKnown RBP16.08■□□□□ 0.17
LDB3-208ENST00000623007 CTSLP07711 333 aa16.08■□□□□ 0.17
LDB3-208ENST00000623007 SNRPB2P08579 225 aaKnown RBP16.08■□□□□ 0.17
LDB3-208ENST00000623007 ARSAP15289 507 aa16.08■□□□□ 0.17
LDB3-208ENST00000623007 PSMC3P17980 439 aa16.08■□□□□ 0.17
LDB3-208ENST00000623007 ITGAXP20702 1163 aa16.08■□□□□ 0.17
LDB3-208ENST00000623007 CYP2A7P20853 494 aa16.08■□□□□ 0.17
LDB3-208ENST00000623007 GCKP35557 465 aa16.08■□□□□ 0.17
LDB3-208ENST00000623007 NUDT2P50583 147 aa16.08■□□□□ 0.17
LDB3-208ENST00000623007 CCNG1P51959 295 aa16.08■□□□□ 0.17
LDB3-208ENST00000623007 HK3P52790 923 aa16.08■□□□□ 0.17
LDB3-208ENST00000623007 AP2B1P63010 937 aa16.08■□□□□ 0.17
LDB3-208ENST00000623007 CREB5Q02930 508 aa16.08■□□□□ 0.17
LDB3-208ENST00000623007 TBL3Q12788 808 aaKnown RBP16.08■□□□□ 0.17
LDB3-208ENST00000623007 RALGDSQ12967 914 aa16.08■□□□□ 0.17
LDB3-208ENST00000623007 GTF2H2Q13888 395 aa16.08■□□□□ 0.17
LDB3-208ENST00000623007 PTK2BQ14289 1009 aa16.08■□□□□ 0.17
LDB3-208ENST00000623007 SPATS1Q496A3 300 aa16.08■□□□□ 0.17
LDB3-208ENST00000623007 ACSBG2Q5FVE4 666 aa16.08■□□□□ 0.17
LDB3-208ENST00000623007 C1orf146Q5VVC0 180 aa16.08■□□□□ 0.17
LDB3-208ENST00000623007 CLEC6AQ6EIG7 209 aa16.08■□□□□ 0.17
LDB3-208ENST00000623007 GTF2H2CQ6P1K8 395 aa16.08■□□□□ 0.17
LDB3-208ENST00000623007 PGM2L1Q6PCE3 622 aa16.08■□□□□ 0.17
LDB3-208ENST00000623007 FBXL19Q6PCT2 694 aa16.08■□□□□ 0.17
LDB3-208ENST00000623007 LIPIQ6XZB0 460 aa16.08■□□□□ 0.17
LDB3-208ENST00000623007 DEFB107AQ8IZN7 70 aa16.08■□□□□ 0.17
LDB3-208ENST00000623007 MIER2Q8N344 545 aa16.08■□□□□ 0.17
LDB3-208ENST00000623007 FBXW8Q8N3Y1 598 aa16.08■□□□□ 0.17
LDB3-208ENST00000623007 ZNF514Q96K75 400 aaPredicted RBP16.08■□□□□ 0.17
LDB3-208ENST00000623007 RIPOR3Q96MK2 946 aa16.08■□□□□ 0.17
LDB3-208ENST00000623007 SLC12A9Q9BXP2 914 aa16.08■□□□□ 0.17
LDB3-208ENST00000623007 CD244Q9BZW8 370 aa16.08■□□□□ 0.17
LDB3-208ENST00000623007 TMEM245Q9H330 911 aa16.08■□□□□ 0.17
LDB3-208ENST00000623007 PARVBQ9HBI1 364 aa16.08■□□□□ 0.17
LDB3-208ENST00000623007 ACSS2Q9NR19 701 aa16.08■□□□□ 0.17
LDB3-208ENST00000623007 WWOXQ9NZC7 414 aa16.08■□□□□ 0.17
LDB3-208ENST00000623007 OPTCQ9UBM4 332 aa16.08■□□□□ 0.17
LDB3-208ENST00000623007 SLC7A8Q9UHI5 535 aa16.08■□□□□ 0.17
LDB3-208ENST00000623007 CDH22Q9UJ99 828 aa16.08■□□□□ 0.17
LDB3-208ENST00000623007 IKZF3Q9UKT9 509 aa16.08■□□□□ 0.17
LDB3-208ENST00000623007 ANGPTL2Q9UKU9 493 aa16.08■□□□□ 0.17
LDB3-208ENST00000623007 C2orf16Q68DN1 1984 aa16.08■□□□□ 0.17
LDB3-208ENST00000623007 KIAA1549LQ6ZVL6 1849 aa16.08■□□□□ 0.16
LDB3-208ENST00000623007 A0A088AWK7 358 aa16.08■□□□□ 0.16
LDB3-208ENST00000623007 NCF1BA6NI72 391 aaPredicted RBP16.08■□□□□ 0.16
LDB3-208ENST00000623007 A8MUI8 341 aa16.08■□□□□ 0.16
LDB3-208ENST00000623007 NCF1CA8MVU1 366 aaPredicted RBP16.08■□□□□ 0.16
LDB3-208ENST00000623007 K7EPI3 171 aa16.08■□□□□ 0.16
LDB3-208ENST00000623007 PIP5K1BO14986 540 aa16.08■□□□□ 0.16
LDB3-208ENST00000623007 NCF1P14598 390 aaPredicted RBP16.08■□□□□ 0.16
LDB3-208ENST00000623007 GGT5P36269 586 aa16.08■□□□□ 0.16
LDB3-208ENST00000623007 GRIA2P42262 883 aa16.08■□□□□ 0.16
LDB3-208ENST00000623007 MTTPP55157 894 aa16.08■□□□□ 0.16
LDB3-208ENST00000623007 SLC25A3Q00325 362 aa16.08■□□□□ 0.16
LDB3-208ENST00000623007 RPS6KA2Q15349 733 aa16.08■□□□□ 0.16
LDB3-208ENST00000623007 MMEL1Q495T6 779 aa16.08■□□□□ 0.16
LDB3-208ENST00000623007 TCEAL5Q5H9L2 206 aa16.08■□□□□ 0.16
LDB3-208ENST00000623007 C9orf64Q5T6V5 341 aa16.08■□□□□ 0.16
LDB3-208ENST00000623007 SERPINA13PQ6UXR4 307 aa16.08■□□□□ 0.16
LDB3-208ENST00000623007 CYHR1Q6ZMK1 362 aa16.08■□□□□ 0.16
LDB3-208ENST00000623007 LRRC70Q7Z2Q7 622 aa16.08■□□□□ 0.16
LDB3-208ENST00000623007 HSD11B1LQ7Z5J1 315 aa16.08■□□□□ 0.16
LDB3-208ENST00000623007 PHYKPLQ8IUZ5 450 aa16.08■□□□□ 0.16
LDB3-208ENST00000623007 GDPD5Q8WTR4 605 aa16.08■□□□□ 0.16
LDB3-208ENST00000623007 SORCS1Q8WY21 1168 aa16.08■□□□□ 0.16
LDB3-208ENST00000623007 ATP6V1E2Q96A05 226 aa16.08■□□□□ 0.16
LDB3-208ENST00000623007 ROPN1LQ96C74 230 aa16.08■□□□□ 0.16
LDB3-208ENST00000623007 TUBGCP3Q96CW5 907 aa16.08■□□□□ 0.16
LDB3-208ENST00000623007 AKTIPQ9H8T0 292 aa16.08■□□□□ 0.16
LDB3-208ENST00000623007 STX18Q9P2W9 335 aaKnown RBP16.08■□□□□ 0.16
LDB3-208ENST00000623007 MTF2Q9Y483 593 aaPredicted RBP16.08■□□□□ 0.16
LDB3-208ENST00000623007 ATG2AQ2TAZ0 1938 aa16.07■□□□□ 0.16
LDB3-208ENST00000623007 PLXNB3Q9ULL4 1909 aa16.07■□□□□ 0.16
LDB3-208ENST00000623007 TBC1D3BA6NDS4 549 aa16.07■□□□□ 0.16
LDB3-208ENST00000623007 ATG13O75143 517 aa16.07■□□□□ 0.16
LDB3-208ENST00000623007 EBLN1P0CF75 366 aa16.07■□□□□ 0.16
LDB3-208ENST00000623007 EPB42P16452 691 aa16.07■□□□□ 0.16
LDB3-208ENST00000623007 FCARP24071 287 aa16.07■□□□□ 0.16
LDB3-208ENST00000623007 ZNF33BQ06732 778 aa16.07■□□□□ 0.16
LDB3-208ENST00000623007 DPTQ07507 201 aa16.07■□□□□ 0.16
LDB3-208ENST00000623007 MAD2L1Q13257 205 aaPredicted RBP16.07■□□□□ 0.16
LDB3-208ENST00000623007 KPNB1Q14974 876 aaKnown RBP16.07■□□□□ 0.16
LDB3-208ENST00000623007 CCDC6Q16204 474 aa16.07■□□□□ 0.16
LDB3-208ENST00000623007 GAB4Q2WGN9 574 aa16.07■□□□□ 0.16
LDB3-208ENST00000623007 BNC2Q6ZN30 1099 aaPredicted RBP16.07■□□□□ 0.16
LDB3-208ENST00000623007 Q6ZVL8 140 aa16.07■□□□□ 0.16
LDB3-208ENST00000623007 MTSS1LQ765P7 747 aa16.07■□□□□ 0.16
LDB3-208ENST00000623007 PARS2Q7L3T8 475 aaKnown RBP16.07■□□□□ 0.16
LDB3-208ENST00000623007 C12orf40Q86WS4 652 aa16.07■□□□□ 0.16
LDB3-208ENST00000623007 GALNT13Q8IUC8 556 aa16.07■□□□□ 0.16
LDB3-208ENST00000623007 PIP4K2CQ8TBX8 421 aa16.07■□□□□ 0.16
LDB3-208ENST00000623007 MCOLN3Q8TDD5 553 aa16.07■□□□□ 0.16
LDB3-208ENST00000623007 ATL1Q8WXF7 558 aa16.07■□□□□ 0.16
LDB3-208ENST00000623007 GLYATL1Q969I3 302 aa16.07■□□□□ 0.16
LDB3-208ENST00000623007 RHBDF1Q96CC6 855 aa16.07■□□□□ 0.16
LDB3-208ENST00000623007 AP2M1Q96CW1 435 aa16.07■□□□□ 0.16
LDB3-208ENST00000623007 DTD2Q96FN9 168 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms