RNA–Protein interactions for RNA: ENST00000622836.1

PCDHGC3-208, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 3

Gene PCDHGC3, Length 795 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-208ENST00000622836 IGLV3-16A0A075B6K0 115 aa13.69□□□□□ -0.22
PCDHGC3-208ENST00000622836 LILRA5A6NI73 299 aa13.69□□□□□ -0.22
PCDHGC3-208ENST00000622836 F8W8V4 182 aa13.69□□□□□ -0.22
PCDHGC3-208ENST00000622836 QSOX1O00391 747 aa13.69□□□□□ -0.22
PCDHGC3-208ENST00000622836 PLD2O14939 933 aa13.69□□□□□ -0.22
PCDHGC3-208ENST00000622836 TMEM63AO94886 807 aa13.69□□□□□ -0.22
PCDHGC3-208ENST00000622836 AP2A2O94973 939 aa13.69□□□□□ -0.22
PCDHGC3-208ENST00000622836 FTH1P02794 183 aa13.69□□□□□ -0.22
PCDHGC3-208ENST00000622836 AMD1P17707 334 aa13.69□□□□□ -0.22
PCDHGC3-208ENST00000622836 PAMP19021 973 aa13.69□□□□□ -0.22
PCDHGC3-208ENST00000622836 MPSTP25325 297 aa13.69□□□□□ -0.22
PCDHGC3-208ENST00000622836 NMBRP28336 390 aa13.69□□□□□ -0.22
PCDHGC3-208ENST00000622836 MAGEA6P43360 314 aa13.69□□□□□ -0.22
PCDHGC3-208ENST00000622836 DR1Q01658 176 aa13.69□□□□□ -0.22
PCDHGC3-208ENST00000622836 ACVR1Q04771 509 aa13.69□□□□□ -0.22
PCDHGC3-208ENST00000622836 KRT33BQ14525 404 aa13.69□□□□□ -0.22
PCDHGC3-208ENST00000622836 SNAP47Q5SQN1 464 aa13.69□□□□□ -0.22
PCDHGC3-208ENST00000622836 PACS1Q6VY07 963 aa13.69□□□□□ -0.22
PCDHGC3-208ENST00000622836 TMPRSS9Q7Z410 1059 aa13.69□□□□□ -0.22
PCDHGC3-208ENST00000622836 SLITRK4Q8IW52 837 aa13.69□□□□□ -0.22
PCDHGC3-208ENST00000622836 RBM12BQ8IXT5 1001 aaKnown RBP13.69□□□□□ -0.22
PCDHGC3-208ENST00000622836 PPIL6Q8IXY8 311 aa13.69□□□□□ -0.22
PCDHGC3-208ENST00000622836 OR4D9Q8NGE8 314 aa13.69□□□□□ -0.22
PCDHGC3-208ENST00000622836 LINC00615Q96LM1 132 aaPredicted RBP13.69□□□□□ -0.22
PCDHGC3-208ENST00000622836 CCDC74BQ96LY2 380 aa13.69□□□□□ -0.22
PCDHGC3-208ENST00000622836 DCBLD2Q96PD2 775 aa13.69□□□□□ -0.22
PCDHGC3-208ENST00000622836 EPB41L1Q9H4G0 881 aa13.69□□□□□ -0.22
PCDHGC3-208ENST00000622836 THSD1Q9NS62 852 aa13.69□□□□□ -0.22
PCDHGC3-208ENST00000622836 RNF14Q9UBS8 474 aa13.69□□□□□ -0.22
PCDHGC3-208ENST00000622836 SOX13Q9UN79 622 aa13.69□□□□□ -0.22
PCDHGC3-208ENST00000622836 RAXQ9Y2V3 346 aa13.69□□□□□ -0.22
PCDHGC3-208ENST00000622836 NEU2Q9Y3R4 380 aa13.69□□□□□ -0.22
PCDHGC3-208ENST00000622836 LOXL2Q9Y4K0 774 aa13.69□□□□□ -0.22
PCDHGC3-208ENST00000622836 PCDHGA8Q9Y5G5 932 aa13.69□□□□□ -0.22
PCDHGC3-208ENST00000622836 CFAP20Q9Y6A4 193 aaKnown RBP13.69□□□□□ -0.22
PCDHGC3-208ENST00000622836 USP24Q9UPU5 2620 aa13.69□□□□□ -0.22
PCDHGC3-208ENST00000622836 IGHV5-10-1A0A0J9YXX1 117 aa13.68□□□□□ -0.22
PCDHGC3-208ENST00000622836 C17orf113A0A1B0GUU1 675 aa13.68□□□□□ -0.22
PCDHGC3-208ENST00000622836 SDR42E2A6NKP2 422 aa13.68□□□□□ -0.22
PCDHGC3-208ENST00000622836 CCDC188H7C350 402 aa13.68□□□□□ -0.22
PCDHGC3-208ENST00000622836 IFRD1O00458 451 aaPredicted RBP13.68□□□□□ -0.22
PCDHGC3-208ENST00000622836 CD3EAPO15446 510 aaKnown RBP13.68□□□□□ -0.22
PCDHGC3-208ENST00000622836 SGTAO43765 313 aa13.68□□□□□ -0.22
PCDHGC3-208ENST00000622836 UBXN7O94888 489 aa13.68□□□□□ -0.22
PCDHGC3-208ENST00000622836 TNFSF15O95150 251 aa13.68□□□□□ -0.22
PCDHGC3-208ENST00000622836 OR56A5P0C7T3 313 aa13.68□□□□□ -0.22
PCDHGC3-208ENST00000622836 MTHFD1P11586 935 aaKnown RBP13.68□□□□□ -0.22
PCDHGC3-208ENST00000622836 MLNP12872 115 aa13.68□□□□□ -0.22
PCDHGC3-208ENST00000622836 HGFP14210 728 aa13.68□□□□□ -0.22
PCDHGC3-208ENST00000622836 HOXB3P14651 431 aaPredicted RBP13.68□□□□□ -0.22
PCDHGC3-208ENST00000622836 TYRP1P17643 537 aa13.68□□□□□ -0.22
PCDHGC3-208ENST00000622836 CSF2RBP32927 897 aa13.68□□□□□ -0.22
PCDHGC3-208ENST00000622836 LIMK2P53671 638 aa13.68□□□□□ -0.22
PCDHGC3-208ENST00000622836 ZFP36L1Q07352 338 aaKnown RBP13.68□□□□□ -0.22
PCDHGC3-208ENST00000622836 PTK6Q13882 451 aa13.68□□□□□ -0.22
PCDHGC3-208ENST00000622836 GPR18Q14330 331 aa13.68□□□□□ -0.22
PCDHGC3-208ENST00000622836 PLCL1Q15111 1095 aa13.68□□□□□ -0.22
PCDHGC3-208ENST00000622836 RPE65Q16518 533 aa13.68□□□□□ -0.22
PCDHGC3-208ENST00000622836 TBC1D25Q3MII6 688 aa13.68□□□□□ -0.22
PCDHGC3-208ENST00000622836 SYTL3Q4VX76 610 aa13.68□□□□□ -0.22
PCDHGC3-208ENST00000622836 TMEM71Q6P5X7 295 aa13.68□□□□□ -0.22
PCDHGC3-208ENST00000622836 CES3Q6UWW8 571 aa13.68□□□□□ -0.22
PCDHGC3-208ENST00000622836 PCGF5Q86SE9 256 aa13.68□□□□□ -0.22
PCDHGC3-208ENST00000622836 JAMLQ86YT9 394 aa13.68□□□□□ -0.22
PCDHGC3-208ENST00000622836 RCBTB1Q8NDN9 531 aa13.68□□□□□ -0.22
PCDHGC3-208ENST00000622836 MCUQ8NE86 351 aa13.68□□□□□ -0.22
PCDHGC3-208ENST00000622836 TMEM159Q96B96 161 aa13.68□□□□□ -0.22
PCDHGC3-208ENST00000622836 MFSD3Q96ES6 412 aa13.68□□□□□ -0.22
PCDHGC3-208ENST00000622836 ZNF578Q96N58 590 aaPredicted RBP13.68□□□□□ -0.22
PCDHGC3-208ENST00000622836 SERPINB12Q96P63 405 aa13.68□□□□□ -0.22
PCDHGC3-208ENST00000622836 KIFC1Q9BW19 673 aa13.68□□□□□ -0.22
PCDHGC3-208ENST00000622836 TSSK1BQ9BXA7 367 aa13.68□□□□□ -0.22
PCDHGC3-208ENST00000622836 COG4Q9H9E3 785 aa13.68□□□□□ -0.22
PCDHGC3-208ENST00000622836 UCK1Q9HA47 277 aa13.68□□□□□ -0.22
PCDHGC3-208ENST00000622836 MRM3Q9HC36 420 aaKnown RBP13.68□□□□□ -0.22
PCDHGC3-208ENST00000622836 SLC40A1Q9NP59 571 aa13.68□□□□□ -0.22
PCDHGC3-208ENST00000622836 KCND1Q9NSA2 647 aa13.68□□□□□ -0.22
PCDHGC3-208ENST00000622836 TREX1Q9NSU2 369 aa13.68□□□□□ -0.22
PCDHGC3-208ENST00000622836 TMEM9Q9P0T7 183 aa13.68□□□□□ -0.22
PCDHGC3-208ENST00000622836 PISDQ9UG56 409 aa13.68□□□□□ -0.22
PCDHGC3-208ENST00000622836 KLHL3Q9UH77 587 aa13.68□□□□□ -0.22
PCDHGC3-208ENST00000622836 PCYOX1Q9UHG3 505 aa13.68□□□□□ -0.22
PCDHGC3-208ENST00000622836 MAD1L1Q9Y6D9 718 aa13.68□□□□□ -0.22
PCDHGC3-208ENST00000622836 ANKRD11Q6UB99 2663 aaPredicted RBP13.68□□□□□ -0.22
PCDHGC3-208ENST00000622836 COL27A1Q8IZC6 1860 aaPredicted RBP13.67□□□□□ -0.22
PCDHGC3-208ENST00000622836 ASPMQ8IZT6 3477 aa13.67□□□□□ -0.22
PCDHGC3-208ENST00000622836 KIF26BQ2KJY2 2108 aa13.67□□□□□ -0.22
PCDHGC3-208ENST00000622836 PRAMEF33A0A0G2JMD5 474 aa13.67□□□□□ -0.22
PCDHGC3-208ENST00000622836 A0A1W2PNU3 283 aaPredicted RBP13.67□□□□□ -0.22
PCDHGC3-208ENST00000622836 PMS2P1A4D2B8 440 aa13.67□□□□□ -0.22
PCDHGC3-208ENST00000622836 SRRM3A6NNA2 597 aaPredicted RBP13.67□□□□□ -0.22
PCDHGC3-208ENST00000622836 A8MU76 341 aa13.67□□□□□ -0.22
PCDHGC3-208ENST00000622836 TAF4O00268 1085 aa13.67□□□□□ -0.22
PCDHGC3-208ENST00000622836 RRP8O43159 456 aaKnown RBP13.67□□□□□ -0.22
PCDHGC3-208ENST00000622836 OR1I1O60431 355 aa13.67□□□□□ -0.22
PCDHGC3-208ENST00000622836 NDUFS3O75489 264 aa13.67□□□□□ -0.22
PCDHGC3-208ENST00000622836 VAPBO95292 243 aa13.67□□□□□ -0.22
PCDHGC3-208ENST00000622836 CAPNS1P04632 268 aa13.67□□□□□ -0.22
PCDHGC3-208ENST00000622836 GSTM1P09488 218 aa13.67□□□□□ -0.22
PCDHGC3-208ENST00000622836 THRAP10827 490 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms