RNA–Protein interactions for RNA: ENST00000622702.1

PDLIM2-221, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5 BASIC

Gene PDLIM2, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-221ENST00000622702 VWA7Q9Y334 891 aa19.51■□□□□ 0.71
PDLIM2-221ENST00000622702 ASCC3Q8N3C0 2202 aaKnown RBP19.51■□□□□ 0.71
PDLIM2-221ENST00000622702 LRP4O75096 1905 aa19.51■□□□□ 0.71
PDLIM2-221ENST00000622702 HMX2A2RU54 273 aa19.5■□□□□ 0.71
PDLIM2-221ENST00000622702 IQCF5A8MTL0 148 aa19.5■□□□□ 0.71
PDLIM2-221ENST00000622702 RASGRF2O14827 1237 aa19.5■□□□□ 0.71
PDLIM2-221ENST00000622702 TM4SF5O14894 197 aa19.5■□□□□ 0.71
PDLIM2-221ENST00000622702 TNFP01375 233 aa19.5■□□□□ 0.71
PDLIM2-221ENST00000622702 ZNF883P0CG24 379 aa19.5■□□□□ 0.71
PDLIM2-221ENST00000622702 GNPDA1P46926 289 aa19.5■□□□□ 0.71
PDLIM2-221ENST00000622702 IL9RQ01113 521 aa19.5■□□□□ 0.71
PDLIM2-221ENST00000622702 ZNF844Q08AG5 666 aa19.5■□□□□ 0.71
PDLIM2-221ENST00000622702 SLC14A1Q13336 389 aa19.5■□□□□ 0.71
PDLIM2-221ENST00000622702 LGSNQ5TDP6 509 aa19.5■□□□□ 0.71
PDLIM2-221ENST00000622702 HECTD2Q5U5R9 776 aa19.5■□□□□ 0.71
PDLIM2-221ENST00000622702 HDXQ7Z353 690 aa19.5■□□□□ 0.71
PDLIM2-221ENST00000622702 PHACTR4Q8IZ21 702 aa19.5■□□□□ 0.71
PDLIM2-221ENST00000622702 RIBC1Q8N443 379 aaPredicted RBP19.5■□□□□ 0.71
PDLIM2-221ENST00000622702 BEND7Q8N7W2 519 aaPredicted RBP19.5■□□□□ 0.71
PDLIM2-221ENST00000622702 ACVR1CQ8NER5 493 aa19.5■□□□□ 0.71
PDLIM2-221ENST00000622702 LKAAEAR1Q8TD35 194 aa19.5■□□□□ 0.71
PDLIM2-221ENST00000622702 EPS8L3Q8TE67 593 aaKnown RBP19.5■□□□□ 0.71
PDLIM2-221ENST00000622702 TIMM29Q9BSF4 260 aa19.5■□□□□ 0.71
PDLIM2-221ENST00000622702 CCM2Q9BSQ5 444 aa19.5■□□□□ 0.71
PDLIM2-221ENST00000622702 LATS2Q9NRM7 1088 aa19.5■□□□□ 0.71
PDLIM2-221ENST00000622702 KLF15Q9UIH9 416 aa19.5■□□□□ 0.71
PDLIM2-221ENST00000622702 PRKAB1Q9Y478 270 aa19.5■□□□□ 0.71
PDLIM2-221ENST00000622702 A0A1B0GTQ1 180 aa19.49■□□□□ 0.71
PDLIM2-221ENST00000622702 C17orf113A0A1B0GUU1 675 aa19.49■□□□□ 0.71
PDLIM2-221ENST00000622702 KCNJ13O60928 360 aa19.49■□□□□ 0.71
PDLIM2-221ENST00000622702 POP7O75817 140 aaKnown RBP19.49■□□□□ 0.71
PDLIM2-221ENST00000622702 KRT37O76014 449 aa19.49■□□□□ 0.71
PDLIM2-221ENST00000622702 CD59P13987 128 aa19.49■□□□□ 0.71
PDLIM2-221ENST00000622702 FDXRP22570 491 aa19.49■□□□□ 0.71
PDLIM2-221ENST00000622702 SLCO1A2P46721 670 aa19.49■□□□□ 0.71
PDLIM2-221ENST00000622702 ARRB1P49407 418 aaPredicted RBP19.49■□□□□ 0.71
PDLIM2-221ENST00000622702 CCT8P50990 548 aa19.49■□□□□ 0.71
PDLIM2-221ENST00000622702 TIAL1Q01085 375 aaKnown RBP eCLIP19.49■□□□□ 0.71
PDLIM2-221ENST00000622702 POU4F1Q01851 419 aa19.49■□□□□ 0.71
PDLIM2-221ENST00000622702 LRP8Q14114 963 aa19.49■□□□□ 0.71
PDLIM2-221ENST00000622702 PUM1Q14671 1186 aaKnown RBP eCLIP19.49■□□□□ 0.71
PDLIM2-221ENST00000622702 ZNF658BQ4V348 819 aaPredicted RBP19.49■□□□□ 0.71
PDLIM2-221ENST00000622702 RD3Q7Z3Z2 195 aa19.49■□□□□ 0.71
PDLIM2-221ENST00000622702 KRT222Q8N1A0 295 aa19.49■□□□□ 0.71
PDLIM2-221ENST00000622702 ELMO2Q96JJ3 720 aa19.49■□□□□ 0.71
PDLIM2-221ENST00000622702 VIPAS39Q9H9C1 493 aa19.49■□□□□ 0.71
PDLIM2-221ENST00000622702 SPATS2LQ9NUQ6 558 aaKnown RBP19.49■□□□□ 0.71
PDLIM2-221ENST00000622702 DNAJC28Q9NX36 388 aa19.49■□□□□ 0.71
PDLIM2-221ENST00000622702 TAS2R13Q9NYV9 303 aa19.49■□□□□ 0.71
PDLIM2-221ENST00000622702 KLHL42Q9P2K6 505 aa19.49■□□□□ 0.71
PDLIM2-221ENST00000622702 GULP1Q9UBP9 304 aa19.49■□□□□ 0.71
PDLIM2-221ENST00000622702 DCDC2BA2VCK2 349 aa19.48■□□□□ 0.71
PDLIM2-221ENST00000622702 MGAT4DA6NG13 374 aa19.48■□□□□ 0.71
PDLIM2-221ENST00000622702 E5RI56 91 aa19.48■□□□□ 0.71
PDLIM2-221ENST00000622702 DYNC1I1O14576 645 aa19.48■□□□□ 0.71
PDLIM2-221ENST00000622702 VPS26AO75436 327 aa19.48■□□□□ 0.71
PDLIM2-221ENST00000622702 TRIM16O95361 564 aa19.48■□□□□ 0.71
PDLIM2-221ENST00000622702 SNRPAP09012 282 aaKnown RBP19.48■□□□□ 0.71
PDLIM2-221ENST00000622702 JUNDP17535 347 aa19.48■□□□□ 0.71
PDLIM2-221ENST00000622702 CHRM3P20309 590 aa19.48■□□□□ 0.71
PDLIM2-221ENST00000622702 CDKN2DP55273 166 aa19.48■□□□□ 0.71
PDLIM2-221ENST00000622702 TAS2R39P59534 338 aa19.48■□□□□ 0.71
PDLIM2-221ENST00000622702 DMPKQ09013 629 aa19.48■□□□□ 0.71
PDLIM2-221ENST00000622702 DNAJC3Q13217 504 aa19.48■□□□□ 0.71
PDLIM2-221ENST00000622702 SHBQ15464 509 aa19.48■□□□□ 0.71
PDLIM2-221ENST00000622702 ZNF542PQ5EBM4 170 aa19.48■□□□□ 0.71
PDLIM2-221ENST00000622702 MROH9Q5TGP6 573 aa19.48■□□□□ 0.71
PDLIM2-221ENST00000622702 CROCCP2Q86T23 111 aa19.48■□□□□ 0.71
PDLIM2-221ENST00000622702 AMZ2Q86W34 360 aa19.48■□□□□ 0.71
PDLIM2-221ENST00000622702 OR2L2Q8NH16 312 aa19.48■□□□□ 0.71
PDLIM2-221ENST00000622702 MTBPQ96DY7 904 aa19.48■□□□□ 0.71
PDLIM2-221ENST00000622702 OLFM1Q99784 485 aa19.48■□□□□ 0.71
PDLIM2-221ENST00000622702 SLC13A1Q9BZW2 595 aa19.48■□□□□ 0.71
PDLIM2-221ENST00000622702 SLC23A2Q9UGH3 650 aa19.48■□□□□ 0.71
PDLIM2-221ENST00000622702 GPSM3Q9Y4H4 160 aa19.48■□□□□ 0.71
PDLIM2-221ENST00000622702 CABIN1Q9Y6J0 2220 aa19.48■□□□□ 0.71
PDLIM2-221ENST00000622702 IQANK1A0A1B0GTG1 560 aa19.48■□□□□ 0.71
PDLIM2-221ENST00000622702 PRR19A6NJB7 356 aa19.48■□□□□ 0.71
PDLIM2-221ENST00000622702 SMIM23A6NLE4 172 aa19.48■□□□□ 0.71
PDLIM2-221ENST00000622702 KPNA5O15131 536 aa19.48■□□□□ 0.71
PDLIM2-221ENST00000622702 ACP5P13686 325 aa19.48■□□□□ 0.71
PDLIM2-221ENST00000622702 ITGB6P18564 788 aa19.48■□□□□ 0.71
PDLIM2-221ENST00000622702 CCR7P32248 378 aa19.48■□□□□ 0.71
PDLIM2-221ENST00000622702 SKIV2L2P42285 1042 aaKnown RBP19.48■□□□□ 0.71
PDLIM2-221ENST00000622702 RXRGP48443 463 aa19.48■□□□□ 0.71
PDLIM2-221ENST00000622702 CLCN7P51798 805 aa19.48■□□□□ 0.71
PDLIM2-221ENST00000622702 HNRNPKP61978 463 aaKnown RBP eCLIP19.48■□□□□ 0.71
PDLIM2-221ENST00000622702 BMPR2Q13873 1038 aa19.48■□□□□ 0.71
PDLIM2-221ENST00000622702 USP10Q14694 798 aaKnown RBP19.48■□□□□ 0.71
PDLIM2-221ENST00000622702 ZKSCAN8Q15776 578 aaPredicted RBP19.48■□□□□ 0.71
PDLIM2-221ENST00000622702 UGT3A1Q6NUS8 523 aa19.48■□□□□ 0.71
PDLIM2-221ENST00000622702 CHST15Q7LFX5 561 aaPredicted RBP19.48■□□□□ 0.71
PDLIM2-221ENST00000622702 HM13Q8TCT9 377 aa19.48■□□□□ 0.71
PDLIM2-221ENST00000622702 ISL2Q96A47 359 aa19.48■□□□□ 0.71
PDLIM2-221ENST00000622702 TSPAN17Q96FV3 270 aa19.48■□□□□ 0.71
PDLIM2-221ENST00000622702 TMEM168Q9H0V1 697 aa19.48■□□□□ 0.71
PDLIM2-221ENST00000622702 TCEAL2Q9H3H9 227 aaPredicted RBP19.48■□□□□ 0.71
PDLIM2-221ENST00000622702 POPDC3Q9HBV1 291 aa19.48■□□□□ 0.71
PDLIM2-221ENST00000622702 CTNNAL1Q9UBT7 734 aa19.48■□□□□ 0.71
PDLIM2-221ENST00000622702 APOBEC3BQ9UH17 382 aaKnown RBP19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms