RNA–Protein interactions for RNA: ENST00000620996.4

VTA1-205, Transcript of vesicle trafficking 1, humanhuman

TSL 3 BASIC

Gene VTA1, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-205ENST00000620996 FBXL19Q6PCT2 694 aa9.79□□□□□ -0.84
VTA1-205ENST00000620996 LAYNQ6UX15 382 aa9.79□□□□□ -0.84
VTA1-205ENST00000620996 ADAMTSL2Q86TH1 951 aa9.79□□□□□ -0.84
VTA1-205ENST00000620996 RNF148Q8N7C7 305 aa9.79□□□□□ -0.84
VTA1-205ENST00000620996 BEND7Q8N7W2 519 aaPredicted RBP9.79□□□□□ -0.84
VTA1-205ENST00000620996 SNRNP27Q8WVK2 155 aaKnown RBP9.79□□□□□ -0.84
VTA1-205ENST00000620996 NPAS2Q99743 824 aa9.79□□□□□ -0.84
VTA1-205ENST00000620996 FAM126AQ9BYI3 521 aaPredicted RBP9.79□□□□□ -0.84
VTA1-205ENST00000620996 NSUN3Q9H649 340 aaKnown RBP9.79□□□□□ -0.84
VTA1-205ENST00000620996 MARK1Q9P0L2 795 aa9.79□□□□□ -0.84
VTA1-205ENST00000620996 ADAMTS6Q9UKP5 1117 aa9.79□□□□□ -0.84
VTA1-205ENST00000620996 ANTXRLA6NF34 631 aa9.79□□□□□ -0.84
VTA1-205ENST00000620996 KRT36O76013 467 aa9.79□□□□□ -0.84
VTA1-205ENST00000620996 SORBS2O94875 1100 aaKnown RBP9.79□□□□□ -0.84
VTA1-205ENST00000620996 CHEK2O96017 543 aa9.79□□□□□ -0.84
VTA1-205ENST00000620996 TIMP2P16035 220 aa9.79□□□□□ -0.84
VTA1-205ENST00000620996 RIPK1Q13546 671 aa9.79□□□□□ -0.84
VTA1-205ENST00000620996 FASTKQ14296 549 aaKnown RBP9.79□□□□□ -0.84
VTA1-205ENST00000620996 KHDC1Q4VXA5 237 aaKnown RBP9.79□□□□□ -0.84
VTA1-205ENST00000620996 MBOAT1Q6ZNC8 495 aa9.79□□□□□ -0.84
VTA1-205ENST00000620996 FRS2Q8WU20 508 aa9.79□□□□□ -0.84
VTA1-205ENST00000620996 C3orf30Q96M34 536 aa9.79□□□□□ -0.84
VTA1-205ENST00000620996 NOL11Q9H8H0 719 aaKnown RBP9.79□□□□□ -0.84
VTA1-205ENST00000620996 ZFP14Q9HCL3 533 aa9.79□□□□□ -0.84
VTA1-205ENST00000620996 DYRK4Q9NR20 520 aa9.79□□□□□ -0.84
VTA1-205ENST00000620996 NKX1-2Q9UD57 310 aaPredicted RBP9.79□□□□□ -0.84
VTA1-205ENST00000620996 RGSL1A5PLK6 1076 aa9.78□□□□□ -0.84
VTA1-205ENST00000620996 FFAR2O15552 330 aa9.78□□□□□ -0.84
VTA1-205ENST00000620996 PEX11AO75192 247 aa9.78□□□□□ -0.84
VTA1-205ENST00000620996 OR4F21O95013 312 aa9.78□□□□□ -0.84
VTA1-205ENST00000620996 ITGAXP20702 1163 aa9.78□□□□□ -0.84
VTA1-205ENST00000620996 CCND1P24385 295 aa9.78□□□□□ -0.84
VTA1-205ENST00000620996 PSMA3P25788 255 aa9.78□□□□□ -0.84
VTA1-205ENST00000620996 GDF5P43026 501 aa9.78□□□□□ -0.84
VTA1-205ENST00000620996 RCN1Q15293 331 aa9.78□□□□□ -0.84
VTA1-205ENST00000620996 CRY1Q16526 586 aa9.78□□□□□ -0.84
VTA1-205ENST00000620996 ZNF805Q5CZA5 627 aa9.78□□□□□ -0.84
VTA1-205ENST00000620996 OR56A4Q8NGH8 313 aa9.78□□□□□ -0.84
VTA1-205ENST00000620996 WFIKKN2Q8TEU8 576 aa9.78□□□□□ -0.84
VTA1-205ENST00000620996 PANX3Q96QZ0 392 aa9.78□□□□□ -0.84
VTA1-205ENST00000620996 MCCC1Q96RQ3 725 aaPredicted RBP9.78□□□□□ -0.84
VTA1-205ENST00000620996 ACOX2Q99424 681 aa9.78□□□□□ -0.84
VTA1-205ENST00000620996 DNAJC15Q9Y5T4 150 aa9.78□□□□□ -0.84
VTA1-205ENST00000620996 HELZP42694 1942 aaKnown RBP9.78□□□□□ -0.84
VTA1-205ENST00000620996 CFAP99D6REC4 459 aa9.78□□□□□ -0.84
VTA1-205ENST00000620996 TM7SF2O76062 418 aa9.78□□□□□ -0.84
VTA1-205ENST00000620996 BAG2O95816 211 aa9.78□□□□□ -0.84
VTA1-205ENST00000620996 ASLP04424 464 aa9.78□□□□□ -0.84
VTA1-205ENST00000620996 CISD3P0C7P0 127 aa9.78□□□□□ -0.84
VTA1-205ENST00000620996 ADARP55265 1226 aaKnown RBP9.78□□□□□ -0.84
VTA1-205ENST00000620996 SGO1Q5FBB7 561 aa9.78□□□□□ -0.84
VTA1-205ENST00000620996 WASHC2DQ5SRD0 308 aa9.78□□□□□ -0.84
VTA1-205ENST00000620996 TXNDC11Q6PKC3 985 aa9.78□□□□□ -0.84
VTA1-205ENST00000620996 RIPOR1Q6ZS17 1223 aa9.78□□□□□ -0.84
VTA1-205ENST00000620996 GPRIN3Q6ZVF9 776 aa9.78□□□□□ -0.84
VTA1-205ENST00000620996 PARS2Q7L3T8 475 aaKnown RBP9.78□□□□□ -0.84
VTA1-205ENST00000620996 SYVN1Q86TM6 617 aa9.78□□□□□ -0.84
VTA1-205ENST00000620996 CBARPQ8N350 705 aaPredicted RBP9.78□□□□□ -0.84
VTA1-205ENST00000620996 OR52B6Q8NGF0 335 aa9.78□□□□□ -0.84
VTA1-205ENST00000620996 OR9I1Q8NGQ6 314 aa9.78□□□□□ -0.84
VTA1-205ENST00000620996 ELMO1Q92556 727 aa9.78□□□□□ -0.84
VTA1-205ENST00000620996 ABTB1Q969K4 478 aaPredicted RBP9.78□□□□□ -0.84
VTA1-205ENST00000620996 ASB2Q96Q27 587 aa9.78□□□□□ -0.84
VTA1-205ENST00000620996 LYSMD1Q96S90 227 aa9.78□□□□□ -0.84
VTA1-205ENST00000620996 AKTIPQ9H8T0 292 aa9.78□□□□□ -0.84
VTA1-205ENST00000620996 MEAF6Q9HAF1 191 aa9.78□□□□□ -0.84
VTA1-205ENST00000620996 NUDT4Q9NZJ9 180 aa9.78□□□□□ -0.84
VTA1-205ENST00000620996 CIDEBQ9UHD4 219 aa9.78□□□□□ -0.84
VTA1-205ENST00000620996 SARDHQ9UL12 918 aa9.78□□□□□ -0.84
VTA1-205ENST00000620996 UNC80Q8N2C7 3258 aa9.78□□□□□ -0.84
VTA1-205ENST00000620996 A0A1W2PQ67 120 aa9.78□□□□□ -0.84
VTA1-205ENST00000620996 CCDC85CA6NKD9 419 aa9.78□□□□□ -0.84
VTA1-205ENST00000620996 PSMD12O00232 456 aaPredicted RBP9.78□□□□□ -0.84
VTA1-205ENST00000620996 EPHX1P07099 455 aa9.78□□□□□ -0.84
VTA1-205ENST00000620996 TCN1P20061 433 aaPredicted RBP9.78□□□□□ -0.84
VTA1-205ENST00000620996 RPS3P23396 243 aaKnown RBP eCLIP9.78□□□□□ -0.84
VTA1-205ENST00000620996 PIK3CGP48736 1102 aa9.78□□□□□ -0.84
VTA1-205ENST00000620996 PKNOX1P55347 436 aa9.78□□□□□ -0.84
VTA1-205ENST00000620996 BLMHQ13867 455 aa9.78□□□□□ -0.84
VTA1-205ENST00000620996 PHKG1Q16816 387 aa9.78□□□□□ -0.84
VTA1-205ENST00000620996 SYTL3Q4VX76 610 aa9.78□□□□□ -0.84
VTA1-205ENST00000620996 MMAAQ8IVH4 418 aaKnown RBP9.78□□□□□ -0.84
VTA1-205ENST00000620996 GALNT15Q8N3T1 639 aa9.78□□□□□ -0.84
VTA1-205ENST00000620996 SUSD6Q92537 303 aa9.78□□□□□ -0.84
VTA1-205ENST00000620996 ULK4Q96C45 1275 aa9.78□□□□□ -0.84
VTA1-205ENST00000620996 AP2M1Q96CW1 435 aa9.78□□□□□ -0.84
VTA1-205ENST00000620996 KCTD5Q9NXV2 234 aa9.78□□□□□ -0.84
VTA1-205ENST00000620996 CACNA2D2Q9NY47 1150 aa9.78□□□□□ -0.84
VTA1-205ENST00000620996 SLC7A8Q9UHI5 535 aa9.78□□□□□ -0.84
VTA1-205ENST00000620996 PCTPQ9UKL6 214 aa9.78□□□□□ -0.84
VTA1-205ENST00000620996 SOBPA7XYQ1 873 aa9.77□□□□□ -0.85
VTA1-205ENST00000620996 HOXC11O43248 304 aaPredicted RBP9.77□□□□□ -0.85
VTA1-205ENST00000620996 LZTS3O60299 673 aaPredicted RBP9.77□□□□□ -0.85
VTA1-205ENST00000620996 MAGEC1O60732 1142 aa9.77□□□□□ -0.85
VTA1-205ENST00000620996 SRPRAP08240 638 aaKnown RBP9.77□□□□□ -0.85
VTA1-205ENST00000620996 HGFP14210 728 aa9.77□□□□□ -0.85
VTA1-205ENST00000620996 VCLP18206 1134 aa9.77□□□□□ -0.85
VTA1-205ENST00000620996 MSX2P35548 267 aaPredicted RBP9.77□□□□□ -0.85
VTA1-205ENST00000620996 PSMD8P48556 350 aa9.77□□□□□ -0.85
VTA1-205ENST00000620996 GRB7Q14451 532 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms