RNA–Protein interactions for RNA: ENST00000620675.4

NEK3-210, Transcript of NIMA related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEK3, Length 2,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-210ENST00000620675 TSR3Q9UJK0 312 aaKnown RBP13.4□□□□□ -0.27
NEK3-210ENST00000620675 PSMD13Q9UNM6 376 aa13.4□□□□□ -0.27
NEK3-210ENST00000620675 WDR37Q9Y2I8 494 aa13.4□□□□□ -0.27
NEK3-210ENST00000620675 MTO1Q9Y2Z2 717 aaKnown RBP13.4□□□□□ -0.27
NEK3-210ENST00000620675 PRAMEF33A0A0G2JMD5 474 aa13.39□□□□□ -0.27
NEK3-210ENST00000620675 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.39□□□□□ -0.27
NEK3-210ENST00000620675 HMX2A2RU54 273 aa13.39□□□□□ -0.27
NEK3-210ENST00000620675 GPR89AB7ZAQ6 455 aa13.39□□□□□ -0.27
NEK3-210ENST00000620675 H3BM21 787 aa13.39□□□□□ -0.27
NEK3-210ENST00000620675 SNX2O60749 519 aa13.39□□□□□ -0.27
NEK3-210ENST00000620675 SPAG6O75602 509 aa13.39□□□□□ -0.27
NEK3-210ENST00000620675 GPR89BP0CG08 455 aa13.39□□□□□ -0.27
NEK3-210ENST00000620675 CD59P13987 128 aa13.39□□□□□ -0.27
NEK3-210ENST00000620675 PKMP14618 531 aaKnown RBP13.39□□□□□ -0.27
NEK3-210ENST00000620675 BRAFP15056 766 aa13.39□□□□□ -0.27
NEK3-210ENST00000620675 CD151P48509 253 aa13.39□□□□□ -0.27
NEK3-210ENST00000620675 BOP1Q14137 746 aaKnown RBP13.39□□□□□ -0.27
NEK3-210ENST00000620675 ZNF460Q14592 562 aa13.39□□□□□ -0.27
NEK3-210ENST00000620675 RNF187Q5TA31 235 aaPredicted RBP13.39□□□□□ -0.27
NEK3-210ENST00000620675 KIAA0408Q6ZU52 694 aa13.39□□□□□ -0.27
NEK3-210ENST00000620675 CFAP206Q8IYR0 622 aa13.39□□□□□ -0.27
NEK3-210ENST00000620675 OR2W6PQ8NHA6 318 aa13.39□□□□□ -0.27
NEK3-210ENST00000620675 HEXDCQ8WVB3 486 aa13.39□□□□□ -0.27
NEK3-210ENST00000620675 LINC00615Q96LM1 132 aaPredicted RBP13.39□□□□□ -0.27
NEK3-210ENST00000620675 CCM2Q9BSQ5 444 aa13.39□□□□□ -0.27
NEK3-210ENST00000620675 AARSD1Q9BTE6 412 aaKnown RBP13.39□□□□□ -0.27
NEK3-210ENST00000620675 SIRPGQ9P1W8 387 aa13.39□□□□□ -0.27
NEK3-210ENST00000620675 MGAT4DA6NG13 374 aa13.38□□□□□ -0.27
NEK3-210ENST00000620675 LMO7DNF2Z398 122 aa13.38□□□□□ -0.27
NEK3-210ENST00000620675 POC1B-GALNT4F8VUJ3 575 aa13.38□□□□□ -0.27
NEK3-210ENST00000620675 CASC3O15234 703 aaKnown RBP13.38□□□□□ -0.27
NEK3-210ENST00000620675 AP2A2O94973 939 aa13.38□□□□□ -0.27
NEK3-210ENST00000620675 OR56A5P0C7T3 313 aa13.38□□□□□ -0.27
NEK3-210ENST00000620675 PPARGP37231 505 aaPredicted RBP13.38□□□□□ -0.27
NEK3-210ENST00000620675 ADARP55265 1226 aaKnown RBP13.38□□□□□ -0.27
NEK3-210ENST00000620675 ILF3Q12906 894 aaKnown RBP eCLIP13.38□□□□□ -0.27
NEK3-210ENST00000620675 BMPR2Q13873 1038 aa13.38□□□□□ -0.27
NEK3-210ENST00000620675 STPG1Q5TH74 334 aa13.38□□□□□ -0.27
NEK3-210ENST00000620675 EMBQ6PCB8 327 aa13.38□□□□□ -0.27
NEK3-210ENST00000620675 EID2Q8N6I1 236 aa13.38□□□□□ -0.27
NEK3-210ENST00000620675 GPATCH11Q8N954 259 aa13.38□□□□□ -0.27
NEK3-210ENST00000620675 SIDT2Q8NBJ9 832 aaKnown RBP13.38□□□□□ -0.27
NEK3-210ENST00000620675 FAM46DQ8NEK8 389 aa13.38□□□□□ -0.27
NEK3-210ENST00000620675 OR2L2Q8NH16 312 aa13.38□□□□□ -0.27
NEK3-210ENST00000620675 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.38□□□□□ -0.27
NEK3-210ENST00000620675 ELMO1Q92556 727 aa13.38□□□□□ -0.27
NEK3-210ENST00000620675 CAVIN3Q969G5 261 aa13.38□□□□□ -0.27
NEK3-210ENST00000620675 VPS39Q96JC1 886 aa13.38□□□□□ -0.27
NEK3-210ENST00000620675 ZNF514Q96K75 400 aaPredicted RBP13.38□□□□□ -0.27
NEK3-210ENST00000620675 TIMM29Q9BSF4 260 aa13.38□□□□□ -0.27
NEK3-210ENST00000620675 CAB39LQ9H9S4 337 aa13.38□□□□□ -0.27
NEK3-210ENST00000620675 GNPTGQ9UJJ9 305 aa13.38□□□□□ -0.27
NEK3-210ENST00000620675 RUVBL2Q9Y230 463 aaKnown RBP13.38□□□□□ -0.27
NEK3-210ENST00000620675 CDYLQ9Y232 598 aa13.38□□□□□ -0.27
NEK3-210ENST00000620675 KNTC1P50748 2209 aa13.38□□□□□ -0.27
NEK3-210ENST00000620675 PCM1Q15154 2024 aa13.38□□□□□ -0.27
NEK3-210ENST00000620675 A0A087WUV0 522 aaPredicted RBP13.38□□□□□ -0.27
NEK3-210ENST00000620675 A6NCN8 305 aa13.38□□□□□ -0.27
NEK3-210ENST00000620675 B4DGG1 531 aa13.38□□□□□ -0.27
NEK3-210ENST00000620675 ESR1P03372 595 aa13.38□□□□□ -0.27
NEK3-210ENST00000620675 ABHD2P08910 425 aa13.38□□□□□ -0.27
NEK3-210ENST00000620675 SAT1P21673 171 aa13.38□□□□□ -0.27
NEK3-210ENST00000620675 PHBP35232 272 aa13.38□□□□□ -0.27
NEK3-210ENST00000620675 CLCN7P51798 805 aa13.38□□□□□ -0.27
NEK3-210ENST00000620675 ELOCQ15369 112 aa13.38□□□□□ -0.27
NEK3-210ENST00000620675 SLC26A11Q86WA9 606 aa13.38□□□□□ -0.27
NEK3-210ENST00000620675 LRRC6Q86X45 466 aa13.38□□□□□ -0.27
NEK3-210ENST00000620675 CDKL2Q92772 493 aa13.38□□□□□ -0.27
NEK3-210ENST00000620675 CYTH2Q99418 400 aa13.38□□□□□ -0.27
NEK3-210ENST00000620675 PAFAH2Q99487 392 aa13.38□□□□□ -0.27
NEK3-210ENST00000620675 GPR21Q99679 349 aa13.38□□□□□ -0.27
NEK3-210ENST00000620675 RBBP8Q99708 897 aa13.38□□□□□ -0.27
NEK3-210ENST00000620675 CFAP20Q9Y6A4 193 aaKnown RBP13.38□□□□□ -0.27
NEK3-210ENST00000620675 OR52A4PA6NMU1 304 aa13.37□□□□□ -0.27
NEK3-210ENST00000620675 SIGLEC6O43699 453 aa13.37□□□□□ -0.27
NEK3-210ENST00000620675 SH3BP5O60239 455 aa13.37□□□□□ -0.27
NEK3-210ENST00000620675 PCDHGA12O60330 932 aa13.37□□□□□ -0.27
NEK3-210ENST00000620675 DFNA5O60443 496 aa13.37□□□□□ -0.27
NEK3-210ENST00000620675 CHRM3P20309 590 aa13.37□□□□□ -0.27
NEK3-210ENST00000620675 AOAHP28039 575 aa13.37□□□□□ -0.27
NEK3-210ENST00000620675 HSPA14Q0VDF9 509 aa13.37□□□□□ -0.27
NEK3-210ENST00000620675 CLCA4Q14CN2 919 aa13.37□□□□□ -0.27
NEK3-210ENST00000620675 HECTD2Q5U5R9 776 aa13.37□□□□□ -0.27
NEK3-210ENST00000620675 METRNLQ641Q3 311 aa13.37□□□□□ -0.27
NEK3-210ENST00000620675 ZNF449Q6P9G9 518 aa13.37□□□□□ -0.27
NEK3-210ENST00000620675 GALNT7Q86SF2 657 aa13.37□□□□□ -0.27
NEK3-210ENST00000620675 CEP97Q8IW35 865 aa13.37□□□□□ -0.27
NEK3-210ENST00000620675 NAGSQ8N159 534 aa13.37□□□□□ -0.27
NEK3-210ENST00000620675 DCAKDQ8WVC6 231 aa13.37□□□□□ -0.27
NEK3-210ENST00000620675 NRTNQ99748 197 aa13.37□□□□□ -0.27
NEK3-210ENST00000620675 CPNE1Q99829 537 aa13.37□□□□□ -0.27
NEK3-210ENST00000620675 GSDMCQ9BYG8 508 aa13.37□□□□□ -0.27
NEK3-210ENST00000620675 DPEP2Q9H4A9 486 aa13.37□□□□□ -0.27
NEK3-210ENST00000620675 RHOJQ9H4E5 214 aa13.37□□□□□ -0.27
NEK3-210ENST00000620675 COG4Q9H9E3 785 aa13.37□□□□□ -0.27
NEK3-210ENST00000620675 CTNNAL1Q9UBT7 734 aa13.37□□□□□ -0.27
NEK3-210ENST00000620675 LY6G6EA0A0G2JKS1 128 aa13.36□□□□□ -0.27
NEK3-210ENST00000620675 FAM95CA0A1B0GW59 222 aa13.36□□□□□ -0.27
NEK3-210ENST00000620675 SLC5A10A0PJK1 596 aa13.36□□□□□ -0.27
NEK3-210ENST00000620675 FOXO6A8MYZ6 492 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms