RNA–Protein interactions for RNA: ENST00000620514.1

HMGN3-203, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 3 BASIC

Gene HMGN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-203ENST00000620514 PIH1D1Q9NWS0 290 aaKnown RBP16.81■□□□□ 0.28
HMGN3-203ENST00000620514 CRLS1Q9UJA2 301 aa16.81■□□□□ 0.28
HMGN3-203ENST00000620514 PILRAQ9UKJ1 303 aa16.81■□□□□ 0.28
HMGN3-203ENST00000620514 MGAT4DA6NG13 374 aa16.8■□□□□ 0.28
HMGN3-203ENST00000620514 AGAP14A8MT82 685 aa16.8■□□□□ 0.28
HMGN3-203ENST00000620514 POLR1CO15160 346 aaPredicted RBP16.8■□□□□ 0.28
HMGN3-203ENST00000620514 ZNF189O75820 626 aaPredicted RBP16.8■□□□□ 0.28
HMGN3-203ENST00000620514 PRSS56P0CW18 603 aa16.8■□□□□ 0.28
HMGN3-203ENST00000620514 CDKN1CP49918 316 aaPredicted RBP16.8■□□□□ 0.28
HMGN3-203ENST00000620514 SH3BP2P78314 561 aa16.8■□□□□ 0.28
HMGN3-203ENST00000620514 BCL7AQ4VC05 210 aa16.8■□□□□ 0.28
HMGN3-203ENST00000620514 METRNLQ641Q3 311 aa16.8■□□□□ 0.28
HMGN3-203ENST00000620514 IRGCQ6NXR0 463 aa16.8■□□□□ 0.28
HMGN3-203ENST00000620514 FAM92BQ6ZTR7 304 aa16.8■□□□□ 0.28
HMGN3-203ENST00000620514 RNF10Q8N5U6 811 aaKnown RBP16.8■□□□□ 0.28
HMGN3-203ENST00000620514 LILRA3Q8N6C8 439 aaPredicted RBP16.8■□□□□ 0.28
HMGN3-203ENST00000620514 ZSCAN1Q8NBB4 408 aa16.8■□□□□ 0.28
HMGN3-203ENST00000620514 ZNF514Q96K75 400 aaPredicted RBP16.8■□□□□ 0.28
HMGN3-203ENST00000620514 INSM2Q96T92 566 aaPredicted RBP16.8■□□□□ 0.28
HMGN3-203ENST00000620514 IMP3Q9NV31 184 aaKnown RBP16.8■□□□□ 0.28
HMGN3-203ENST00000620514 FEZ2Q9UHY8 353 aaPredicted RBP16.8■□□□□ 0.28
HMGN3-203ENST00000620514 GUCA1BQ9UMX6 200 aa16.8■□□□□ 0.28
HMGN3-203ENST00000620514 RASSF9O75901 435 aa16.79■□□□□ 0.28
HMGN3-203ENST00000620514 MTHFD1P11586 935 aaKnown RBP16.79■□□□□ 0.28
HMGN3-203ENST00000620514 ITGALP20701 1170 aa16.79■□□□□ 0.28
HMGN3-203ENST00000620514 MC4RP32245 332 aa16.79■□□□□ 0.28
HMGN3-203ENST00000620514 PDE1BQ01064 536 aa16.79■□□□□ 0.28
HMGN3-203ENST00000620514 FOXM1Q08050 763 aa16.79■□□□□ 0.28
HMGN3-203ENST00000620514 CACHD1Q5VU97 1274 aa16.79■□□□□ 0.28
HMGN3-203ENST00000620514 PRSS42Q7Z5A4 293 aa16.79■□□□□ 0.28
HMGN3-203ENST00000620514 SNX20Q7Z614 316 aa16.79■□□□□ 0.28
HMGN3-203ENST00000620514 NXPE1Q8N323 547 aa16.79■□□□□ 0.28
HMGN3-203ENST00000620514 SPDYE1Q8NFV5 336 aaPredicted RBP16.79■□□□□ 0.28
HMGN3-203ENST00000620514 OR2L2Q8NH16 312 aa16.79■□□□□ 0.28
HMGN3-203ENST00000620514 DCUN1D1Q96GG9 259 aa16.79■□□□□ 0.28
HMGN3-203ENST00000620514 SLC12A9Q9BXP2 914 aa16.79■□□□□ 0.28
HMGN3-203ENST00000620514 ZNF768Q9H5H4 540 aaKnown RBP16.79■□□□□ 0.28
HMGN3-203ENST00000620514 LRRC40Q9H9A6 602 aa16.79■□□□□ 0.28
HMGN3-203ENST00000620514 CFAP46Q8IYW2 2715 aa16.79■□□□□ 0.28
HMGN3-203ENST00000620514 LOC101059948A0A1B0GTJ6 334 aa16.78■□□□□ 0.28
HMGN3-203ENST00000620514 STK17BO94768 372 aa16.78■□□□□ 0.28
HMGN3-203ENST00000620514 POLBP06746 335 aa16.78■□□□□ 0.28
HMGN3-203ENST00000620514 HADHAP40939 763 aa16.78■□□□□ 0.28
HMGN3-203ENST00000620514 SEPT6Q14141 434 aa16.78■□□□□ 0.28
HMGN3-203ENST00000620514 POU6F1Q14863 301 aa16.78■□□□□ 0.28
HMGN3-203ENST00000620514 TBR1Q16650 682 aa16.78■□□□□ 0.28
HMGN3-203ENST00000620514 UNC5BQ8IZJ1 945 aa16.78■□□□□ 0.28
HMGN3-203ENST00000620514 NLGN4XQ8N0W4 816 aa16.78■□□□□ 0.28
HMGN3-203ENST00000620514 NLGN4YQ8NFZ3 816 aaPredicted RBP16.78■□□□□ 0.28
HMGN3-203ENST00000620514 ULK4Q96C45 1275 aa16.78■□□□□ 0.28
HMGN3-203ENST00000620514 LRRC45Q96CN5 670 aa16.78■□□□□ 0.28
HMGN3-203ENST00000620514 MED8Q96G25 268 aa16.78■□□□□ 0.28
HMGN3-203ENST00000620514 LINC00615Q96LM1 132 aaPredicted RBP16.78■□□□□ 0.28
HMGN3-203ENST00000620514 RMDN2Q96LZ7 410 aa16.78■□□□□ 0.28
HMGN3-203ENST00000620514 C12orf66Q96MD2 445 aa16.78■□□□□ 0.28
HMGN3-203ENST00000620514 COPS8Q99627 209 aa16.78■□□□□ 0.28
HMGN3-203ENST00000620514 ZPBPQ9BS86 351 aa16.78■□□□□ 0.28
HMGN3-203ENST00000620514 NLE1Q9NVX2 485 aaPredicted RBP16.78■□□□□ 0.28
HMGN3-203ENST00000620514 EPHA6Q9UF33 1036 aa16.78■□□□□ 0.28
HMGN3-203ENST00000620514 TMEM184BQ9Y519 407 aaPredicted RBP16.78■□□□□ 0.28
HMGN3-203ENST00000620514 PIEZO2Q9H5I5 2752 aa16.77■□□□□ 0.28
HMGN3-203ENST00000620514 CCDC78A2IDD5 438 aa16.77■□□□□ 0.28
HMGN3-203ENST00000620514 TOX3O15405 576 aaPredicted RBP16.77■□□□□ 0.28
HMGN3-203ENST00000620514 LIASO43766 372 aa16.77■□□□□ 0.28
HMGN3-203ENST00000620514 AP2A1O95782 977 aa16.77■□□□□ 0.28
HMGN3-203ENST00000620514 DLGAP3O95886 979 aa16.77■□□□□ 0.28
HMGN3-203ENST00000620514 ITGB2P05107 769 aa16.77■□□□□ 0.28
HMGN3-203ENST00000620514 ATP1B2P14415 290 aaPredicted RBP16.77■□□□□ 0.28
HMGN3-203ENST00000620514 ZNF28P17035 718 aa16.77■□□□□ 0.28
HMGN3-203ENST00000620514 PRLHRP49683 370 aa16.77■□□□□ 0.28
HMGN3-203ENST00000620514 PLCL1Q15111 1095 aa16.77■□□□□ 0.28
HMGN3-203ENST00000620514 OASLQ15646 514 aaKnown RBP16.77■□□□□ 0.28
HMGN3-203ENST00000620514 P3H1Q32P28 736 aa16.77■□□□□ 0.28
HMGN3-203ENST00000620514 ZRANB3Q5FWF4 1079 aa16.77■□□□□ 0.28
HMGN3-203ENST00000620514 SEL1L2Q5TEA6 688 aa16.77■□□□□ 0.28
HMGN3-203ENST00000620514 PRUNE1Q86TP1 453 aa16.77■□□□□ 0.28
HMGN3-203ENST00000620514 SERPINA9Q86WD7 417 aa16.77■□□□□ 0.28
HMGN3-203ENST00000620514 SLC13A5Q86YT5 568 aaPredicted RBP16.77■□□□□ 0.28
HMGN3-203ENST00000620514 CFAP206Q8IYR0 622 aa16.77■□□□□ 0.28
HMGN3-203ENST00000620514 C1orf54Q8WWF1 131 aa16.77■□□□□ 0.28
HMGN3-203ENST00000620514 KLHL6Q8WZ60 621 aa16.77■□□□□ 0.28
HMGN3-203ENST00000620514 ZDHHC12Q96GR4 267 aa16.77■□□□□ 0.28
HMGN3-203ENST00000620514 ELMO2Q96JJ3 720 aa16.77■□□□□ 0.28
HMGN3-203ENST00000620514 OR6C1Q96RD1 312 aa16.77■□□□□ 0.28
HMGN3-203ENST00000620514 C19orf43Q9BQ61 176 aa16.77■□□□□ 0.28
HMGN3-203ENST00000620514 RAB33BQ9H082 229 aa16.77■□□□□ 0.28
HMGN3-203ENST00000620514 ZDHHC3Q9NYG2 299 aa16.77■□□□□ 0.28
HMGN3-203ENST00000620514 ACSL5Q9ULC5 683 aa16.77■□□□□ 0.28
HMGN3-203ENST00000620514 IGHV5-51A0A0C4DH38 117 aa16.76■□□□□ 0.27
HMGN3-203ENST00000620514 TRBV5-4A0A0C4DH59 114 aa16.76■□□□□ 0.27
HMGN3-203ENST00000620514 GOLGA6L6A8MZA4 724 aa16.76■□□□□ 0.27
HMGN3-203ENST00000620514 SLC35G4P0C7Q5 338 aa16.76■□□□□ 0.27
HMGN3-203ENST00000620514 FAM87AP0C7U9 286 aa16.76■□□□□ 0.27
HMGN3-203ENST00000620514 RALBP11234 206 aa16.76■□□□□ 0.27
HMGN3-203ENST00000620514 PLA2G2AP14555 144 aa16.76■□□□□ 0.27
HMGN3-203ENST00000620514 MAP4P27816 1152 aaKnown RBP16.76■□□□□ 0.27
HMGN3-203ENST00000620514 GPR33Q49SQ1 333 aa16.76■□□□□ 0.27
HMGN3-203ENST00000620514 CCDC38Q502W7 563 aa16.76■□□□□ 0.27
HMGN3-203ENST00000620514 TAS2R42Q7RTR8 314 aa16.76■□□□□ 0.27
HMGN3-203ENST00000620514 ZNF605Q86T29 641 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms