RNA–Protein interactions for RNA: ENST00000620507.4

RBFOX1-223, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 5 BASIC

Gene RBFOX1, Length 4,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-223ENST00000620507 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP9.08□□□□□ -0.96
RBFOX1-223ENST00000620507 ZDHHC7Q9NXF8 308 aa9.08□□□□□ -0.96
RBFOX1-223ENST00000620507 LMCD1Q9NZU5 365 aa9.08□□□□□ -0.96
RBFOX1-223ENST00000620507 ZIM2Q9NZV7 527 aa9.08□□□□□ -0.96
RBFOX1-223ENST00000620507 ADGRE2Q9UHX3 823 aa9.08□□□□□ -0.96
RBFOX1-223ENST00000620507 OAZ3Q9UMX2 235 aa9.08□□□□□ -0.96
RBFOX1-223ENST00000620507 ZNF646O15015 1829 aaPredicted RBP9.08□□□□□ -0.96
RBFOX1-223ENST00000620507 PLXNB2O15031 1838 aa9.08□□□□□ -0.96
RBFOX1-223ENST00000620507 CARNS1A5YM72 827 aa9.08□□□□□ -0.96
RBFOX1-223ENST00000620507 NEDD8-MDP1E9PL57 170 aa9.08□□□□□ -0.96
RBFOX1-223ENST00000620507 KPNA3O00505 521 aaPredicted RBP9.08□□□□□ -0.96
RBFOX1-223ENST00000620507 KPNA5O15131 536 aa9.08□□□□□ -0.96
RBFOX1-223ENST00000620507 RECQL5O94762 991 aaPredicted RBP9.08□□□□□ -0.96
RBFOX1-223ENST00000620507 LRATO95237 230 aa9.08□□□□□ -0.96
RBFOX1-223ENST00000620507 CLDN9O95484 217 aa9.08□□□□□ -0.96
RBFOX1-223ENST00000620507 CXCL14O95715 111 aa9.08□□□□□ -0.96
RBFOX1-223ENST00000620507 ARSAP15289 507 aa9.08□□□□□ -0.96
RBFOX1-223ENST00000620507 GDF5P43026 501 aa9.08□□□□□ -0.96
RBFOX1-223ENST00000620507 TLE2Q04725 743 aa9.08□□□□□ -0.96
RBFOX1-223ENST00000620507 CHRNA6Q15825 494 aa9.08□□□□□ -0.96
RBFOX1-223ENST00000620507 POM121L1PQ3SYA9 428 aa9.08□□□□□ -0.96
RBFOX1-223ENST00000620507 GPR33Q49SQ1 333 aa9.08□□□□□ -0.96
RBFOX1-223ENST00000620507 SZRD1Q7Z422 152 aa9.08□□□□□ -0.96
RBFOX1-223ENST00000620507 HID1Q8IV36 788 aa9.08□□□□□ -0.96
RBFOX1-223ENST00000620507 ADHFE1Q8IWW8 467 aa9.08□□□□□ -0.96
RBFOX1-223ENST00000620507 SYTL1Q8IYJ3 562 aa9.08□□□□□ -0.96
RBFOX1-223ENST00000620507 MARVELD2Q8N4S9 558 aa9.08□□□□□ -0.96
RBFOX1-223ENST00000620507 FATE1Q969F0 183 aa9.08□□□□□ -0.96
RBFOX1-223ENST00000620507 KLHL32Q96NJ5 620 aa9.08□□□□□ -0.96
RBFOX1-223ENST00000620507 CASD1Q96PB1 797 aa9.08□□□□□ -0.96
RBFOX1-223ENST00000620507 SMIM14Q96QK8 99 aa9.08□□□□□ -0.96
RBFOX1-223ENST00000620507 CHID1Q9BWS9 393 aa9.08□□□□□ -0.96
RBFOX1-223ENST00000620507 SMPD3Q9NY59 655 aaPredicted RBP9.08□□□□□ -0.96
RBFOX1-223ENST00000620507 RSL24D1Q9UHA3 163 aaKnown RBP9.08□□□□□ -0.96
RBFOX1-223ENST00000620507 DHRS7Q9Y394 339 aa9.08□□□□□ -0.96
RBFOX1-223ENST00000620507 A0A0U1RQS6 177 aa9.08□□□□□ -0.96
RBFOX1-223ENST00000620507 K7EPI3 171 aa9.08□□□□□ -0.96
RBFOX1-223ENST00000620507 B4GALT3O60512 393 aa9.08□□□□□ -0.96
RBFOX1-223ENST00000620507 CATP04040 527 aaKnown RBP9.08□□□□□ -0.96
RBFOX1-223ENST00000620507 ATF6P18850 670 aa9.08□□□□□ -0.96
RBFOX1-223ENST00000620507 HOXD9P28356 352 aaPredicted RBP9.08□□□□□ -0.96
RBFOX1-223ENST00000620507 GKP32189 559 aa9.08□□□□□ -0.96
RBFOX1-223ENST00000620507 RPS9P46781 194 aaKnown RBP9.08□□□□□ -0.96
RBFOX1-223ENST00000620507 CLCN4P51793 760 aa9.08□□□□□ -0.96
RBFOX1-223ENST00000620507 DGKQP52824 942 aa9.08□□□□□ -0.96
RBFOX1-223ENST00000620507 NUP107P57740 925 aa9.08□□□□□ -0.96
RBFOX1-223ENST00000620507 EEFSECP57772 596 aaKnown RBP9.08□□□□□ -0.96
RBFOX1-223ENST00000620507 FAM189BP81408 668 aa9.08□□□□□ -0.96
RBFOX1-223ENST00000620507 NFKB2Q00653 900 aa9.08□□□□□ -0.96
RBFOX1-223ENST00000620507 HMGCS1Q01581 520 aa9.08□□□□□ -0.96
RBFOX1-223ENST00000620507 FOXM1Q08050 763 aa9.08□□□□□ -0.96
RBFOX1-223ENST00000620507 PLCL1Q15111 1095 aa9.08□□□□□ -0.96
RBFOX1-223ENST00000620507 NADK2Q4G0N4 442 aa9.08□□□□□ -0.96
RBFOX1-223ENST00000620507 CCDC92Q53HC0 331 aaPredicted RBP9.08□□□□□ -0.96
RBFOX1-223ENST00000620507 AFMIDQ63HM1 303 aa9.08□□□□□ -0.96
RBFOX1-223ENST00000620507 OR52E8Q6IFG1 317 aa9.08□□□□□ -0.96
RBFOX1-223ENST00000620507 ERMP1Q7Z2K6 904 aa9.08□□□□□ -0.96
RBFOX1-223ENST00000620507 TRPV3Q8NET8 790 aa9.08□□□□□ -0.96
RBFOX1-223ENST00000620507 MDGA1Q8NFP4 955 aa9.08□□□□□ -0.96
RBFOX1-223ENST00000620507 B4GALNT2Q8NHY0 566 aa9.08□□□□□ -0.96
RBFOX1-223ENST00000620507 OSBPL6Q9BZF3 934 aa9.08□□□□□ -0.96
RBFOX1-223ENST00000620507 C8orf4Q9NR00 106 aa9.08□□□□□ -0.96
RBFOX1-223ENST00000620507 SH3BP4Q9P0V3 963 aa9.08□□□□□ -0.96
RBFOX1-223ENST00000620507 TARM1B6A8C7 271 aa9.07□□□□□ -0.96
RBFOX1-223ENST00000620507 IFRD1O00458 451 aaPredicted RBP9.07□□□□□ -0.96
RBFOX1-223ENST00000620507 ADAM12O43184 909 aa9.07□□□□□ -0.96
RBFOX1-223ENST00000620507 LZTS3O60299 673 aaPredicted RBP9.07□□□□□ -0.96
RBFOX1-223ENST00000620507 SOD2P04179 222 aa9.07□□□□□ -0.96
RBFOX1-223ENST00000620507 MMP2P08253 660 aa9.07□□□□□ -0.96
RBFOX1-223ENST00000620507 G6PDP11413 515 aa9.07□□□□□ -0.96
RBFOX1-223ENST00000620507 CREMQ03060 361 aa9.07□□□□□ -0.96
RBFOX1-223ENST00000620507 LRP8Q14114 963 aa9.07□□□□□ -0.96
RBFOX1-223ENST00000620507 KRT33BQ14525 404 aa9.07□□□□□ -0.96
RBFOX1-223ENST00000620507 ACOX1Q15067 660 aa9.07□□□□□ -0.96
RBFOX1-223ENST00000620507 HIST2H2ACQ16777 129 aaPredicted RBP9.07□□□□□ -0.96
RBFOX1-223ENST00000620507 TTC23Q5W5X9 447 aa9.07□□□□□ -0.96
RBFOX1-223ENST00000620507 HIST2H2AA3Q6FI13 130 aa9.07□□□□□ -0.96
RBFOX1-223ENST00000620507 SLC2A7Q6PXP3 512 aa9.07□□□□□ -0.96
RBFOX1-223ENST00000620507 HACD2Q6Y1H2 254 aa9.07□□□□□ -0.96
RBFOX1-223ENST00000620507 GOLGA7Q7Z5G4 137 aa9.07□□□□□ -0.96
RBFOX1-223ENST00000620507 OR52B6Q8NGF0 335 aa9.07□□□□□ -0.96
RBFOX1-223ENST00000620507 TSPEARQ8WU66 669 aa9.07□□□□□ -0.96
RBFOX1-223ENST00000620507 SLC13A3Q8WWT9 602 aa9.07□□□□□ -0.96
RBFOX1-223ENST00000620507 ATOH8Q96SQ7 321 aa9.07□□□□□ -0.96
RBFOX1-223ENST00000620507 ZNF382Q96SR6 550 aa9.07□□□□□ -0.96
RBFOX1-223ENST00000620507 POLR1BQ9H9Y6 1135 aa9.07□□□□□ -0.96
RBFOX1-223ENST00000620507 MAGEE1Q9HCI5 957 aa9.07□□□□□ -0.96
RBFOX1-223ENST00000620507 ABCB8Q9NUT2 735 aa9.07□□□□□ -0.96
RBFOX1-223ENST00000620507 BACE2Q9Y5Z0 518 aa9.07□□□□□ -0.96
RBFOX1-223ENST00000620507 TTC3P53804 2025 aa9.07□□□□□ -0.96
RBFOX1-223ENST00000620507 RFXANKO14593 260 aa9.07□□□□□ -0.96
RBFOX1-223ENST00000620507 EI24O14681 340 aa9.07□□□□□ -0.96
RBFOX1-223ENST00000620507 GRM6O15303 877 aa9.07□□□□□ -0.96
RBFOX1-223ENST00000620507 DENRO43583 198 aaKnown RBP9.07□□□□□ -0.96
RBFOX1-223ENST00000620507 NBNO60934 754 aa9.07□□□□□ -0.96
RBFOX1-223ENST00000620507 GNRH1P01148 92 aa9.07□□□□□ -0.96
RBFOX1-223ENST00000620507 GJA1P17302 382 aa9.07□□□□□ -0.96
RBFOX1-223ENST00000620507 ITPKAP23677 461 aa9.07□□□□□ -0.96
RBFOX1-223ENST00000620507 CTGFP29279 349 aa9.07□□□□□ -0.96
RBFOX1-223ENST00000620507 HMGCLP35914 325 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms