RNA–Protein interactions for RNA: ENST00000617339.4

SHROOM1-208, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHROOM1, Length 3,638 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-208ENST00000617339 BPIFB6Q8NFQ5 453 aa14.3□□□□□ -0.12
SHROOM1-208ENST00000617339 DNAJB14Q8TBM8 379 aa14.3□□□□□ -0.12
SHROOM1-208ENST00000617339 ASB8Q9H765 288 aa14.3□□□□□ -0.12
SHROOM1-208ENST00000617339 TAS2R13Q9NYV9 303 aa14.3□□□□□ -0.12
SHROOM1-208ENST00000617339 TRMT6Q9UJA5 497 aaKnown RBP14.3□□□□□ -0.12
SHROOM1-208ENST00000617339 ASB1Q9Y576 335 aa14.3□□□□□ -0.12
SHROOM1-208ENST00000617339 GPC6Q9Y625 555 aaPredicted RBP14.3□□□□□ -0.12
SHROOM1-208ENST00000617339 TMEM114B3SHH9 223 aa14.29□□□□□ -0.12
SHROOM1-208ENST00000617339 CLDN11O75508 207 aa14.29□□□□□ -0.12
SHROOM1-208ENST00000617339 HGFP14210 728 aa14.29□□□□□ -0.12
SHROOM1-208ENST00000617339 MAGEA12P43365 314 aa14.29□□□□□ -0.12
SHROOM1-208ENST00000617339 KPNA2P52292 529 aaKnown RBP14.29□□□□□ -0.12
SHROOM1-208ENST00000617339 CDH4P55283 916 aa14.29□□□□□ -0.12
SHROOM1-208ENST00000617339 TRIM25Q14258 630 aaKnown RBP14.29□□□□□ -0.12
SHROOM1-208ENST00000617339 DNAJC14Q6Y2X3 702 aaPredicted RBP14.29□□□□□ -0.12
SHROOM1-208ENST00000617339 KCTD8Q6ZWB6 473 aa14.29□□□□□ -0.12
SHROOM1-208ENST00000617339 EIF2B4Q9UI10 523 aaKnown RBP14.29□□□□□ -0.12
SHROOM1-208ENST00000617339 PKP3Q9Y446 797 aa14.29□□□□□ -0.12
SHROOM1-208ENST00000617339 CACNG3O60359 315 aa14.29□□□□□ -0.12
SHROOM1-208ENST00000617339 HLA-DPA1P20036 260 aa14.29□□□□□ -0.12
SHROOM1-208ENST00000617339 STX1BP61266 288 aa14.29□□□□□ -0.12
SHROOM1-208ENST00000617339 AFMIDQ63HM1 303 aa14.29□□□□□ -0.12
SHROOM1-208ENST00000617339 DHRS4L2Q6PKH6 230 aa14.29□□□□□ -0.12
SHROOM1-208ENST00000617339 TSPAN33Q86UF1 283 aa14.29□□□□□ -0.12
SHROOM1-208ENST00000617339 BADQ92934 168 aa14.29□□□□□ -0.12
SHROOM1-208ENST00000617339 SLCO4A1Q96BD0 722 aa14.29□□□□□ -0.12
SHROOM1-208ENST00000617339 NPLQ9BXD5 320 aaPredicted RBP14.29□□□□□ -0.12
SHROOM1-208ENST00000617339 ASAH2Q9NR71 780 aa14.29□□□□□ -0.12
SHROOM1-208ENST00000617339 FAM32AQ9Y421 112 aaKnown RBP14.29□□□□□ -0.12
SHROOM1-208ENST00000617339 A0A1B0GVM2 712 aa14.29□□□□□ -0.12
SHROOM1-208ENST00000617339 PRORSD1PA6NEY8 169 aa14.29□□□□□ -0.12
SHROOM1-208ENST00000617339 TCAF2A6NFQ2 919 aa14.29□□□□□ -0.12
SHROOM1-208ENST00000617339 DRGXA6NNA5 263 aa14.29□□□□□ -0.12
SHROOM1-208ENST00000617339 B4GAT1O43505 415 aa14.29□□□□□ -0.12
SHROOM1-208ENST00000617339 BMP10O95393 424 aa14.29□□□□□ -0.12
SHROOM1-208ENST00000617339 LPOP22079 712 aaPredicted RBP14.29□□□□□ -0.12
SHROOM1-208ENST00000617339 CLCN2P51788 898 aa14.29□□□□□ -0.12
SHROOM1-208ENST00000617339 NTHL1P78549 312 aa14.29□□□□□ -0.12
SHROOM1-208ENST00000617339 AAK1Q2M2I8 961 aa14.29□□□□□ -0.12
SHROOM1-208ENST00000617339 MBOAT1Q6ZNC8 495 aa14.29□□□□□ -0.12
SHROOM1-208ENST00000617339 C12orf76Q8N812 135 aaPredicted RBP14.29□□□□□ -0.12
SHROOM1-208ENST00000617339 TBRG4Q969Z0 631 aaKnown RBP eCLIP14.29□□□□□ -0.127e-6■■■■■ 27.5
SHROOM1-208ENST00000617339 FEM1AQ9BSK4 669 aa14.29□□□□□ -0.12
SHROOM1-208ENST00000617339 MAGEH1Q9H213 219 aa14.29□□□□□ -0.12
SHROOM1-208ENST00000617339 MFSD1Q9H3U5 465 aa14.29□□□□□ -0.12
SHROOM1-208ENST00000617339 SLCO3A1Q9UIG8 710 aa14.29□□□□□ -0.12
SHROOM1-208ENST00000617339 CCL26Q9Y258 94 aa14.29□□□□□ -0.12
SHROOM1-208ENST00000617339 BRWD1Q9NSI6 2320 aa14.28□□□□□ -0.12
SHROOM1-208ENST00000617339 NEDD8-MDP1E9PL57 170 aa14.28□□□□□ -0.12
SHROOM1-208ENST00000617339 TOR1BO14657 336 aa14.28□□□□□ -0.12
SHROOM1-208ENST00000617339 CLOCKO15516 846 aa14.28□□□□□ -0.12
SHROOM1-208ENST00000617339 PRLP01236 227 aa14.28□□□□□ -0.12
SHROOM1-208ENST00000617339 CNPP09543 421 aaKnown RBP14.28□□□□□ -0.12
SHROOM1-208ENST00000617339 ZNF12P17014 697 aa14.28□□□□□ -0.12
SHROOM1-208ENST00000617339 BTLAQ7Z6A9 289 aa14.28□□□□□ -0.12
SHROOM1-208ENST00000617339 C17orf80Q9BSJ5 609 aa14.28□□□□□ -0.12
SHROOM1-208ENST00000617339 HERC2P3Q9BVR0 1158 aa14.28□□□□□ -0.12
SHROOM1-208ENST00000617339 MTIF3Q9H2K0 278 aaKnown RBP14.28□□□□□ -0.12
SHROOM1-208ENST00000617339 AKTIPQ9H8T0 292 aa14.28□□□□□ -0.12
SHROOM1-208ENST00000617339 EML4Q9HC35 981 aaKnown RBP14.28□□□□□ -0.12
SHROOM1-208ENST00000617339 DUS2Q9NX74 493 aaKnown RBP14.28□□□□□ -0.12
SHROOM1-208ENST00000617339 ATG2BQ96BY7 2078 aa14.28□□□□□ -0.12
SHROOM1-208ENST00000617339 LOC285095A0A1B0GVY8 99 aa14.28□□□□□ -0.12
SHROOM1-208ENST00000617339 TMEM189-UBE2V1I3L0A0 370 aa14.28□□□□□ -0.12
SHROOM1-208ENST00000617339 PFDN6O15212 129 aa14.28□□□□□ -0.12
SHROOM1-208ENST00000617339 CA5AP35218 305 aa14.28□□□□□ -0.12
SHROOM1-208ENST00000617339 UNC50Q53HI1 259 aa14.28□□□□□ -0.12
SHROOM1-208ENST00000617339 TBCELQ5QJ74 424 aa14.28□□□□□ -0.12
SHROOM1-208ENST00000617339 METTL21CQ5VZV1 264 aa14.28□□□□□ -0.12
SHROOM1-208ENST00000617339 SMYD5Q6GMV2 418 aa14.28□□□□□ -0.12
SHROOM1-208ENST00000617339 LRRC49Q8IUZ0 686 aa14.28□□□□□ -0.12
SHROOM1-208ENST00000617339 C17orf50Q8WW18 174 aa14.28□□□□□ -0.12
SHROOM1-208ENST00000617339 PSKH2Q96QS6 385 aa14.28□□□□□ -0.12
SHROOM1-208ENST00000617339 HGH1Q9BTY7 390 aa14.28□□□□□ -0.12
SHROOM1-208ENST00000617339 EFHD1Q9BUP0 239 aa14.28□□□□□ -0.12
SHROOM1-208ENST00000617339 ZDHHC6Q9H6R6 413 aa14.28□□□□□ -0.12
SHROOM1-208ENST00000617339 WARS2Q9UGM6 360 aaKnown RBP14.28□□□□□ -0.12
SHROOM1-208ENST00000617339 TMA7Q9Y2S6 64 aaKnown RBP14.28□□□□□ -0.12
SHROOM1-208ENST00000617339 RALGAPA2Q2PPJ7 1873 aa14.28□□□□□ -0.12
SHROOM1-208ENST00000617339 SCN5AQ14524 2016 aa14.28□□□□□ -0.12
SHROOM1-208ENST00000617339 TARM1B6A8C7 271 aa14.28□□□□□ -0.12
SHROOM1-208ENST00000617339 ECI2O75521 394 aa14.28□□□□□ -0.12
SHROOM1-208ENST00000617339 FGF18O76093 207 aa14.28□□□□□ -0.12
SHROOM1-208ENST00000617339 GLUD1P00367 558 aa14.28□□□□□ -0.12
SHROOM1-208ENST00000617339 IDO1P14902 403 aa14.28□□□□□ -0.12
SHROOM1-208ENST00000617339 CD70P32970 193 aa14.28□□□□□ -0.12
SHROOM1-208ENST00000617339 YBX1P67809 324 aaKnown RBP14.28□□□□□ -0.12
SHROOM1-208ENST00000617339 RAD51Q06609 339 aa14.28□□□□□ -0.12
SHROOM1-208ENST00000617339 MAPK11Q15759 364 aa14.28□□□□□ -0.12
SHROOM1-208ENST00000617339 ANKRD26P1Q6NSI1 321 aa14.28□□□□□ -0.12
SHROOM1-208ENST00000617339 MILR1Q7Z6M3 343 aa14.28□□□□□ -0.12
SHROOM1-208ENST00000617339 BBS2Q9BXC9 721 aa14.28□□□□□ -0.12
SHROOM1-208ENST00000617339 NDEL1Q9GZM8 345 aa14.28□□□□□ -0.12
SHROOM1-208ENST00000617339 ZBTB26Q9HCK0 441 aa14.28□□□□□ -0.12
SHROOM1-208ENST00000617339 ABCB8Q9NUT2 735 aa14.28□□□□□ -0.12
SHROOM1-208ENST00000617339 MTRRQ9UBK8 725 aa14.28□□□□□ -0.12
SHROOM1-208ENST00000617339 MRPS23Q9Y3D9 190 aaKnown RBP14.28□□□□□ -0.12
SHROOM1-208ENST00000617339 IGLV3-10A0A075B6K4 115 aa14.27□□□□□ -0.12
SHROOM1-208ENST00000617339 CNOT3O75175 753 aaKnown RBP14.27□□□□□ -0.12
SHROOM1-208ENST00000617339 CDK14O94921 469 aa14.27□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms