RNA–Protein interactions for RNA: ENST00000617222.4

PCDHGC3-204, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 3 BASIC

Gene PCDHGC3, Length 731 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-204ENST00000617222 HM13Q8TCT9 377 aa15.34■□□□□ 0.05
PCDHGC3-204ENST00000617222 SLC44A1Q8WWI5 657 aa15.34■□□□□ 0.05
PCDHGC3-204ENST00000617222 VPS39Q96JC1 886 aa15.34■□□□□ 0.05
PCDHGC3-204ENST00000617222 ELMO2Q96JJ3 720 aa15.34■□□□□ 0.05
PCDHGC3-204ENST00000617222 PAFAH2Q99487 392 aa15.34■□□□□ 0.05
PCDHGC3-204ENST00000617222 RBBP8Q99708 897 aa15.34■□□□□ 0.05
PCDHGC3-204ENST00000617222 CCDC77Q9BR77 488 aa15.34■□□□□ 0.05
PCDHGC3-204ENST00000617222 MCMBPQ9BTE3 642 aa15.34■□□□□ 0.05
PCDHGC3-204ENST00000617222 SPATS2LQ9NUQ6 558 aaKnown RBP15.34■□□□□ 0.05
PCDHGC3-204ENST00000617222 TAAR2Q9P1P5 351 aa15.34■□□□□ 0.05
PCDHGC3-204ENST00000617222 GALPQ9UBC7 116 aa15.34■□□□□ 0.05
PCDHGC3-204ENST00000617222 GULP1Q9UBP9 304 aa15.34■□□□□ 0.05
PCDHGC3-204ENST00000617222 MTO1Q9Y2Z2 717 aaKnown RBP15.34■□□□□ 0.05
PCDHGC3-204ENST00000617222 VWA7Q9Y334 891 aa15.34■□□□□ 0.05
PCDHGC3-204ENST00000617222 COMMD10Q9Y6G5 202 aa15.34■□□□□ 0.05
PCDHGC3-204ENST00000617222 CSNK1G3Q9Y6M4 447 aa15.34■□□□□ 0.05
PCDHGC3-204ENST00000617222 FAM95CA0A1B0GW59 222 aa15.33■□□□□ 0.04
PCDHGC3-204ENST00000617222 FFAR2O15552 330 aa15.33■□□□□ 0.04
PCDHGC3-204ENST00000617222 PCDHGA12O60330 932 aa15.33■□□□□ 0.04
PCDHGC3-204ENST00000617222 GDF9O60383 454 aa15.33■□□□□ 0.04
PCDHGC3-204ENST00000617222 SHBGP04278 402 aa15.33■□□□□ 0.04
PCDHGC3-204ENST00000617222 INHBAP08476 426 aa15.33■□□□□ 0.04
PCDHGC3-204ENST00000617222 GSTM1P09488 218 aa15.33■□□□□ 0.04
PCDHGC3-204ENST00000617222 ZNF883P0CG24 379 aa15.33■□□□□ 0.04
PCDHGC3-204ENST00000617222 SAT1P21673 171 aa15.33■□□□□ 0.04
PCDHGC3-204ENST00000617222 IDSP22304 550 aa15.33■□□□□ 0.04
PCDHGC3-204ENST00000617222 SPRP35270 261 aaPredicted RBP15.33■□□□□ 0.04
PCDHGC3-204ENST00000617222 CLCNKAP51800 687 aa15.33■□□□□ 0.04
PCDHGC3-204ENST00000617222 CDKN2DP55273 166 aa15.33■□□□□ 0.04
PCDHGC3-204ENST00000617222 GSTM4Q03013 218 aa15.33■□□□□ 0.04
PCDHGC3-204ENST00000617222 DMPKQ09013 629 aa15.33■□□□□ 0.04
PCDHGC3-204ENST00000617222 BOP1Q14137 746 aaKnown RBP15.33■□□□□ 0.04
PCDHGC3-204ENST00000617222 SUZ12Q15022 739 aaKnown RBP15.33■□□□□ 0.04
PCDHGC3-204ENST00000617222 ZNF658BQ4V348 819 aaPredicted RBP15.33■□□□□ 0.04
PCDHGC3-204ENST00000617222 HECTD2Q5U5R9 776 aa15.33■□□□□ 0.04
PCDHGC3-204ENST00000617222 SPNS2Q8IVW8 549 aa15.33■□□□□ 0.04
PCDHGC3-204ENST00000617222 SDR16C5Q8N3Y7 309 aa15.33■□□□□ 0.04
PCDHGC3-204ENST00000617222 COG4Q9H9E3 785 aa15.33■□□□□ 0.04
PCDHGC3-204ENST00000617222 PRDM8Q9NQV8 689 aa15.33■□□□□ 0.04
PCDHGC3-204ENST00000617222 TBC1D29Q9UFV1 150 aa15.33■□□□□ 0.04
PCDHGC3-204ENST00000617222 CORO1CQ9ULV4 474 aaPredicted RBP15.33■□□□□ 0.04
PCDHGC3-204ENST00000617222 MED16Q9Y2X0 877 aa15.33■□□□□ 0.04
PCDHGC3-204ENST00000617222 IKBKGQ9Y6K9 419 aa15.33■□□□□ 0.04
PCDHGC3-204ENST00000617222 CABIN1Q9Y6J0 2220 aa15.32■□□□□ 0.04
PCDHGC3-204ENST00000617222 USP34Q70CQ2 3546 aa15.32■□□□□ 0.04
PCDHGC3-204ENST00000617222 KLHL33A6NCF5 533 aa15.32■□□□□ 0.04
PCDHGC3-204ENST00000617222 PRR19A6NJB7 356 aa15.32■□□□□ 0.04
PCDHGC3-204ENST00000617222 VPS26AO75436 327 aa15.32■□□□□ 0.04
PCDHGC3-204ENST00000617222 GIMD1P0DJR0 217 aa15.32■□□□□ 0.04
PCDHGC3-204ENST00000617222 RPL10P27635 214 aaKnown RBP15.32■□□□□ 0.04
PCDHGC3-204ENST00000617222 AOAHP28039 575 aa15.32■□□□□ 0.04
PCDHGC3-204ENST00000617222 PREPP48147 710 aa15.32■□□□□ 0.04
PCDHGC3-204ENST00000617222 LIMK2P53671 638 aa15.32■□□□□ 0.04
PCDHGC3-204ENST00000617222 TIAL1Q01085 375 aaKnown RBP eCLIP15.32■□□□□ 0.04
PCDHGC3-204ENST00000617222 HSPA14Q0VDF9 509 aa15.32■□□□□ 0.04
PCDHGC3-204ENST00000617222 ILF2Q12905 390 aaKnown RBP15.32■□□□□ 0.04
PCDHGC3-204ENST00000617222 SEPT7Q16181 437 aaKnown RBP15.32■□□□□ 0.04
PCDHGC3-204ENST00000617222 METRNLQ641Q3 311 aa15.32■□□□□ 0.04
PCDHGC3-204ENST00000617222 FAM45BPQ6NSW5 357 aa15.32■□□□□ 0.04
PCDHGC3-204ENST00000617222 LVRNQ6Q4G3 990 aa15.32■□□□□ 0.04
PCDHGC3-204ENST00000617222 XKR5Q6UX68 686 aa15.32■□□□□ 0.04
PCDHGC3-204ENST00000617222 OTOAQ7RTW8 1153 aa15.32■□□□□ 0.04
PCDHGC3-204ENST00000617222 SIDT2Q8NBJ9 832 aaKnown RBP15.32■□□□□ 0.04
PCDHGC3-204ENST00000617222 FAM45AQ8TCE6 357 aa15.32■□□□□ 0.04
PCDHGC3-204ENST00000617222 KCNJ9Q92806 393 aa15.32■□□□□ 0.04
PCDHGC3-204ENST00000617222 GPR21Q99679 349 aa15.32■□□□□ 0.04
PCDHGC3-204ENST00000617222 SLC30A3Q99726 388 aa15.32■□□□□ 0.04
PCDHGC3-204ENST00000617222 DPEP2Q9H4A9 486 aa15.32■□□□□ 0.04
PCDHGC3-204ENST00000617222 TAS2R13Q9NYV9 303 aa15.32■□□□□ 0.04
PCDHGC3-204ENST00000617222 SLC39A10Q9ULF5 831 aa15.32■□□□□ 0.04
PCDHGC3-204ENST00000617222 PCDHGB2Q9Y5G2 931 aa15.32■□□□□ 0.04
PCDHGC3-204ENST00000617222 ADAMTS9Q9P2N4 1935 aa15.32■□□□□ 0.04
PCDHGC3-204ENST00000617222 ZFHX2Q9C0A1 2572 aaPredicted RBP15.32■□□□□ 0.04
PCDHGC3-204ENST00000617222 RALGAPA1Q6GYQ0 2036 aa15.32■□□□□ 0.04
PCDHGC3-204ENST00000617222 TRBV23OR9-2A0A075B6M9 112 aa15.31■□□□□ 0.04
PCDHGC3-204ENST00000617222 SLC5A10A0PJK1 596 aa15.31■□□□□ 0.04
PCDHGC3-204ENST00000617222 PDZK1P1A8MUH7 402 aa15.31■□□□□ 0.04
PCDHGC3-204ENST00000617222 TRIM38O00635 465 aa15.31■□□□□ 0.04
PCDHGC3-204ENST00000617222 TPP1O14773 563 aa15.31■□□□□ 0.04
PCDHGC3-204ENST00000617222 LIN7AO14910 233 aaPredicted RBP15.31■□□□□ 0.04
PCDHGC3-204ENST00000617222 KPNA5O15131 536 aa15.31■□□□□ 0.04
PCDHGC3-204ENST00000617222 EML2O95834 649 aa15.31■□□□□ 0.04
PCDHGC3-204ENST00000617222 APOA4P06727 396 aa15.31■□□□□ 0.04
PCDHGC3-204ENST00000617222 ITGA2BP08514 1039 aa15.31■□□□□ 0.04
PCDHGC3-204ENST00000617222 FDXRP22570 491 aa15.31■□□□□ 0.04
PCDHGC3-204ENST00000617222 GCAP28676 217 aa15.31■□□□□ 0.04
PCDHGC3-204ENST00000617222 PDHA2P29803 388 aa15.31■□□□□ 0.04
PCDHGC3-204ENST00000617222 CLCN7P51798 805 aa15.31■□□□□ 0.04
PCDHGC3-204ENST00000617222 PGGT1BP53609 377 aa15.31■□□□□ 0.04
PCDHGC3-204ENST00000617222 TAS2R39P59534 338 aa15.31■□□□□ 0.04
PCDHGC3-204ENST00000617222 USP10Q14694 798 aaKnown RBP15.31■□□□□ 0.04
PCDHGC3-204ENST00000617222 TMED2Q15363 201 aa15.31■□□□□ 0.04
PCDHGC3-204ENST00000617222 SYTL3Q4VX76 610 aa15.31■□□□□ 0.04
PCDHGC3-204ENST00000617222 BEND6Q5SZJ8 279 aaPredicted RBP15.31■□□□□ 0.04
PCDHGC3-204ENST00000617222 MROH9Q5TGP6 573 aa15.31■□□□□ 0.04
PCDHGC3-204ENST00000617222 UGT3A1Q6NUS8 523 aa15.31■□□□□ 0.04
PCDHGC3-204ENST00000617222 ZBTB2Q8N680 514 aa15.31■□□□□ 0.04
PCDHGC3-204ENST00000617222 EID2Q8N6I1 236 aa15.31■□□□□ 0.04
PCDHGC3-204ENST00000617222 OR2W6PQ8NHA6 318 aa15.31■□□□□ 0.04
PCDHGC3-204ENST00000617222 DCAKDQ8WVC6 231 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms