RNA–Protein interactions for RNA: ENST00000617103.4

CLTCL1-209, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,859 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-209ENST00000617103 ERVK-8P63133 956 aa10.54□□□□□ -0.72
CLTCL1-209ENST00000617103 PTGES3Q15185 160 aaKnown RBP10.54□□□□□ -0.72
CLTCL1-209ENST00000617103 PARP15Q460N3 678 aa10.54□□□□□ -0.72
CLTCL1-209ENST00000617103 PLEKHG4Q58EX7 1191 aa10.54□□□□□ -0.72
CLTCL1-209ENST00000617103 CHSY3Q70JA7 882 aa10.54□□□□□ -0.72
CLTCL1-209ENST00000617103 BEND5Q7L4P6 421 aa10.54□□□□□ -0.72
CLTCL1-209ENST00000617103 ERMP1Q7Z2K6 904 aa10.54□□□□□ -0.72
CLTCL1-209ENST00000617103 CRYBG2Q8N1P7 616 aa10.54□□□□□ -0.72
CLTCL1-209ENST00000617103 LIX1Q8N485 282 aa10.54□□□□□ -0.72
CLTCL1-209ENST00000617103 C1orf127Q8N9H9 656 aa10.54□□□□□ -0.72
CLTCL1-209ENST00000617103 FAM98AQ8NCA5 519 aaKnown RBP10.54□□□□□ -0.72
CLTCL1-209ENST00000617103 HJURPQ8NCD3 748 aaPredicted RBP10.54□□□□□ -0.72
CLTCL1-209ENST00000617103 ART5Q96L15 291 aa10.54□□□□□ -0.72
CLTCL1-209ENST00000617103 C8orf48Q96LL4 319 aa10.54□□□□□ -0.72
CLTCL1-209ENST00000617103 MYPNQ86TC9 1320 aa10.53□□□□□ -0.72
CLTCL1-209ENST00000617103 FAM159BA6NKW6 160 aa10.53□□□□□ -0.72
CLTCL1-209ENST00000617103 MAGEB17A8MXT2 336 aa10.53□□□□□ -0.72
CLTCL1-209ENST00000617103 MATN3O15232 486 aa10.53□□□□□ -0.72
CLTCL1-209ENST00000617103 ANXA4P09525 319 aaPredicted RBP10.53□□□□□ -0.72
CLTCL1-209ENST00000617103 YBEYP58557 167 aaPredicted RBP10.53□□□□□ -0.72
CLTCL1-209ENST00000617103 MYBPC1Q00872 1141 aa10.53□□□□□ -0.72
CLTCL1-209ENST00000617103 DDX59Q5T1V6 619 aaKnown RBP eCLIP10.53□□□□□ -0.72
CLTCL1-209ENST00000617103 CAPN13Q6MZZ7 669 aaPredicted RBP10.53□□□□□ -0.72
CLTCL1-209ENST00000617103 CATSPERGQ6ZRH7 1159 aa10.53□□□□□ -0.72
CLTCL1-209ENST00000617103 CHST15Q7LFX5 561 aaPredicted RBP10.53□□□□□ -0.72
CLTCL1-209ENST00000617103 ANKRD46Q86W74 232 aa10.53□□□□□ -0.72
CLTCL1-209ENST00000617103 COMMD3Q9UBI1 195 aa10.53□□□□□ -0.72
CLTCL1-209ENST00000617103 TCHHQ07283 1943 aa10.53□□□□□ -0.72
CLTCL1-209ENST00000617103 RSL1D1O76021 490 aaKnown RBP10.53□□□□□ -0.72
CLTCL1-209ENST00000617103 PRAMEF1O95521 474 aa10.53□□□□□ -0.72
CLTCL1-209ENST00000617103 PENKP01210 267 aaPredicted RBP10.53□□□□□ -0.72
CLTCL1-209ENST00000617103 GJB1P08034 283 aa10.53□□□□□ -0.72
CLTCL1-209ENST00000617103 CCR10P46092 362 aa10.53□□□□□ -0.72
CLTCL1-209ENST00000617103 MAZP56270 477 aaKnown RBP10.53□□□□□ -0.72
CLTCL1-209ENST00000617103 GPX6P59796 221 aa10.53□□□□□ -0.72
CLTCL1-209ENST00000617103 EMC10Q5UCC4 262 aa10.53□□□□□ -0.72
CLTCL1-209ENST00000617103 DAW1Q8N136 415 aa10.53□□□□□ -0.72
CLTCL1-209ENST00000617103 ZNF347Q96SE7 839 aa10.53□□□□□ -0.72
CLTCL1-209ENST00000617103 PDGFDQ9GZP0 370 aaPredicted RBP10.53□□□□□ -0.72
CLTCL1-209ENST00000617103 ZNF395Q9H8N7 513 aaPredicted RBP10.53□□□□□ -0.72
CLTCL1-209ENST00000617103 APOBEC3GQ9HC16 384 aaKnown RBP10.53□□□□□ -0.72
CLTCL1-209ENST00000617103 C1orf109Q9NX04 203 aa10.53□□□□□ -0.72
CLTCL1-209ENST00000617103 HMGXB4Q9UGU5 601 aa10.53□□□□□ -0.72
CLTCL1-209ENST00000617103 PRKAB1Q9Y478 270 aa10.53□□□□□ -0.72
CLTCL1-209ENST00000617103 MID1O15344 667 aa10.53□□□□□ -0.72
CLTCL1-209ENST00000617103 TBL1XO60907 577 aa10.53□□□□□ -0.72
CLTCL1-209ENST00000617103 POU2F1P14859 743 aa10.53□□□□□ -0.72
CLTCL1-209ENST00000617103 KLF1Q13351 362 aaPredicted RBP10.53□□□□□ -0.72
CLTCL1-209ENST00000617103 WSCD2Q2TBF2 565 aa10.53□□□□□ -0.72
CLTCL1-209ENST00000617103 IQCCQ4KMZ1 466 aa10.53□□□□□ -0.72
CLTCL1-209ENST00000617103 ZNF517Q6ZMY9 492 aaPredicted RBP10.53□□□□□ -0.72
CLTCL1-209ENST00000617103 COLGALT2Q8IYK4 626 aa10.53□□□□□ -0.72
CLTCL1-209ENST00000617103 GJD3Q8N144 294 aa10.53□□□□□ -0.72
CLTCL1-209ENST00000617103 PYROXD2Q8N2H3 581 aa10.53□□□□□ -0.72
CLTCL1-209ENST00000617103 PHTF2Q8N3S3 785 aa10.53□□□□□ -0.72
CLTCL1-209ENST00000617103 CMASQ8NFW8 434 aaPredicted RBP10.53□□□□□ -0.72
CLTCL1-209ENST00000617103 KBTBD7Q8WVZ9 684 aa10.53□□□□□ -0.72
CLTCL1-209ENST00000617103 UFD1Q92890 307 aa10.53□□□□□ -0.72
CLTCL1-209ENST00000617103 AKT1S1Q96B36 256 aa10.53□□□□□ -0.72
CLTCL1-209ENST00000617103 BTN2A3PQ96KV6 586 aa10.53□□□□□ -0.72
CLTCL1-209ENST00000617103 MCMBPQ9BTE3 642 aa10.53□□□□□ -0.72
CLTCL1-209ENST00000617103 BCL2L14Q9BZR8 327 aa10.53□□□□□ -0.72
CLTCL1-209ENST00000617103 ANKHQ9HCJ1 492 aa10.53□□□□□ -0.72
CLTCL1-209ENST00000617103 AMBNQ9NP70 447 aa10.53□□□□□ -0.72
CLTCL1-209ENST00000617103 ACTR3BQ9P1U1 418 aa10.53□□□□□ -0.72
CLTCL1-209ENST00000617103 EIF3KQ9UBQ5 218 aaKnown RBP10.53□□□□□ -0.72
CLTCL1-209ENST00000617103 EIF2B4Q9UI10 523 aaKnown RBP10.53□□□□□ -0.72
CLTCL1-209ENST00000617103 MKLN1Q9UL63 735 aa10.53□□□□□ -0.72
CLTCL1-209ENST00000617103 CXorf49A8MYA2 514 aaPredicted RBP10.53□□□□□ -0.72
CLTCL1-209ENST00000617103 GABBR2O75899 941 aa10.53□□□□□ -0.72
CLTCL1-209ENST00000617103 MT-CYBP00156 380 aaPredicted RBP10.53□□□□□ -0.72
CLTCL1-209ENST00000617103 IFI30P13284 250 aa10.53□□□□□ -0.72
CLTCL1-209ENST00000617103 RHOQP17081 205 aa10.53□□□□□ -0.72
CLTCL1-209ENST00000617103 IMPDH1P20839 514 aa10.53□□□□□ -0.72
CLTCL1-209ENST00000617103 ITGA3P26006 1051 aa10.53□□□□□ -0.72
CLTCL1-209ENST00000617103 GPR1P46091 355 aa10.53□□□□□ -0.72
CLTCL1-209ENST00000617103 RPS14P62263 151 aaKnown RBP10.53□□□□□ -0.72
CLTCL1-209ENST00000617103 SRSF11Q05519 484 aaKnown RBP10.53□□□□□ -0.72
CLTCL1-209ENST00000617103 FBXO43Q4G163 708 aa10.53□□□□□ -0.72
CLTCL1-209ENST00000617103 ZBTB2Q8N680 514 aa10.53□□□□□ -0.72
CLTCL1-209ENST00000617103 TMBIM1Q969X1 311 aa10.53□□□□□ -0.72
CLTCL1-209ENST00000617103 TIFAQ96CG3 184 aa10.53□□□□□ -0.72
CLTCL1-209ENST00000617103 CEP295NLQ96MC4 621 aa10.53□□□□□ -0.72
CLTCL1-209ENST00000617103 ZFYVE1Q9HBF4 777 aa10.53□□□□□ -0.72
CLTCL1-209ENST00000617103 MAT2BQ9NZL9 334 aa10.53□□□□□ -0.72
CLTCL1-209ENST00000617103 GMIPQ9P107 970 aa10.53□□□□□ -0.72
CLTCL1-209ENST00000617103 GRIP1Q9Y3R0 1128 aa10.53□□□□□ -0.72
CLTCL1-209ENST00000617103 RPL36Q9Y3U8 105 aaKnown RBP10.53□□□□□ -0.72
CLTCL1-209ENST00000617103 OR10H1Q9Y4A9 318 aa10.53□□□□□ -0.72
CLTCL1-209ENST00000617103 MROH1Q8NDA8 1641 aa10.53□□□□□ -0.72
CLTCL1-209ENST00000617103 TCRBV7S3A2A0A539 114 aa10.52□□□□□ -0.72
CLTCL1-209ENST00000617103 SCAMP3O14828 347 aaKnown RBP10.52□□□□□ -0.72
CLTCL1-209ENST00000617103 TLR5O60602 858 aa10.52□□□□□ -0.72
CLTCL1-209ENST00000617103 RPIAP49247 311 aa10.52□□□□□ -0.72
CLTCL1-209ENST00000617103 C2orf80Q0P641 193 aa10.52□□□□□ -0.72
CLTCL1-209ENST00000617103 MYBPC3Q14896 1274 aa10.52□□□□□ -0.72
CLTCL1-209ENST00000617103 KLHL22Q53GT1 634 aa10.52□□□□□ -0.72
CLTCL1-209ENST00000617103 SH3D19Q5HYK7 790 aa10.52□□□□□ -0.72
CLTCL1-209ENST00000617103 SYCE2Q6PIF2 218 aa10.52□□□□□ -0.72
CLTCL1-209ENST00000617103 ZNF773Q6PK81 442 aa10.52□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms