RNA–Protein interactions for RNA: ENST00000616390.1

CACNA1C-231, Transcript of calcium voltage-gated channel subunit alpha1 C, human

TSL 2 BASIC

Gene CACNA1C, Length 2,833 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1C-231	ENST00000616390	NSUN3	Q9H649	340 aa	Known RBP	13.7	□□□□□ -0.22
CACNA1C-231	ENST00000616390	ASB8	Q9H765	288 aa		13.7	□□□□□ -0.22
CACNA1C-231	ENST00000616390	MTRR	Q9UBK8	725 aa		13.7	□□□□□ -0.22
CACNA1C-231	ENST00000616390	ZNF711	Q9Y462	761 aa		13.7	□□□□□ -0.22
CACNA1C-231	ENST00000616390	MYO7A	Q13402	2215 aa		13.7	□□□□□ -0.22
CACNA1C-231	ENST00000616390	C1orf232	A0A0U1RR37	186 aa		13.7	□□□□□ -0.22
CACNA1C-231	ENST00000616390	HTRA2	O43464	458 aa	Predicted RBP	13.7	□□□□□ -0.22
CACNA1C-231	ENST00000616390	CLDN7	O95471	211 aa		13.7	□□□□□ -0.22
CACNA1C-231	ENST00000616390	PRAMEF1	O95521	474 aa		13.7	□□□□□ -0.22
CACNA1C-231	ENST00000616390	MLYCD	O95822	493 aa		13.7	□□□□□ -0.22
CACNA1C-231	ENST00000616390	GNAO1	P09471	354 aa		13.7	□□□□□ -0.22
CACNA1C-231	ENST00000616390	GGT5	P36269	586 aa		13.7	□□□□□ -0.22
CACNA1C-231	ENST00000616390	DGKQ	P52824	942 aa		13.7	□□□□□ -0.22
CACNA1C-231	ENST00000616390	LIPE	Q05469	1076 aa		13.7	□□□□□ -0.22
CACNA1C-231	ENST00000616390	NR6A1	Q15406	480 aa		13.7	□□□□□ -0.22
CACNA1C-231	ENST00000616390	C6orf136	Q5SQH8	315 aa		13.7	□□□□□ -0.22
CACNA1C-231	ENST00000616390	HACD2	Q6Y1H2	254 aa		13.7	□□□□□ -0.22
CACNA1C-231	ENST00000616390	DNAJB7	Q7Z6W7	309 aa	Predicted RBP	13.7	□□□□□ -0.22
CACNA1C-231	ENST00000616390	SERPINA9	Q86WD7	417 aa		13.7	□□□□□ -0.22
CACNA1C-231	ENST00000616390	LRRC43	Q8N309	656 aa		13.7	□□□□□ -0.22
CACNA1C-231	ENST00000616390	ZFP28	Q8NHY6	868 aa		13.7	□□□□□ -0.22
CACNA1C-231	ENST00000616390	ZNF461	Q8TAF7	563 aa		13.7	□□□□□ -0.22
CACNA1C-231	ENST00000616390	C2orf15	Q8WU43	125 aa	Known RBP	13.7	□□□□□ -0.22
CACNA1C-231	ENST00000616390	MTFMT	Q96DP5	389 aa	Known RBP	13.7	□□□□□ -0.22
CACNA1C-231	ENST00000616390	CCT7	Q99832	543 aa		13.7	□□□□□ -0.22
CACNA1C-231	ENST00000616390	LHX3	Q9UBR4	397 aa		13.7	□□□□□ -0.22
CACNA1C-231	ENST00000616390	PHF24	Q9UPV7	400 aa		13.7	□□□□□ -0.22
CACNA1C-231	ENST00000616390	TBC1D30	Q9Y2I9	924 aa		13.7	□□□□□ -0.22
CACNA1C-231	ENST00000616390	YIPF1	Q9Y548	306 aa		13.7	□□□□□ -0.22
CACNA1C-231	ENST00000616390	ANAPC1	Q9H1A4	1944 aa		13.7	□□□□□ -0.22
CACNA1C-231	ENST00000616390		A0A1W2PP18	115 aa		13.69	□□□□□ -0.22
CACNA1C-231	ENST00000616390		H3BSA7	217 aa		13.69	□□□□□ -0.22
CACNA1C-231	ENST00000616390	KDM1A	O60341	852 aa		13.69	□□□□□ -0.22
CACNA1C-231	ENST00000616390	PIM1	P11309	404 aa	Predicted RBP	13.69	□□□□□ -0.22
CACNA1C-231	ENST00000616390	GSK3B	P49841	420 aa		13.69	□□□□□ -0.22
CACNA1C-231	ENST00000616390	RPL26	P61254	145 aa	Known RBP	13.69	□□□□□ -0.22
CACNA1C-231	ENST00000616390	INPP5A	Q14642	412 aa		13.69	□□□□□ -0.22
CACNA1C-231	ENST00000616390	ARMC12	Q5T9G4	340 aa		13.69	□□□□□ -0.22
CACNA1C-231	ENST00000616390	KLHDC10	Q6PID8	442 aa		13.69	□□□□□ -0.22
CACNA1C-231	ENST00000616390	AHI1	Q8N157	1196 aa		13.69	□□□□□ -0.22
CACNA1C-231	ENST00000616390	MINDY1	Q8N5J2	469 aa		13.69	□□□□□ -0.22
CACNA1C-231	ENST00000616390	FAM47B	Q8NA70	645 aa		13.69	□□□□□ -0.22
CACNA1C-231	ENST00000616390	OR4F6	Q8NGB9	312 aa		13.69	□□□□□ -0.22
CACNA1C-231	ENST00000616390	RIN3	Q8TB24	985 aa		13.69	□□□□□ -0.22
CACNA1C-231	ENST00000616390	LKAAEAR1	Q8TD35	194 aa		13.69	□□□□□ -0.22
CACNA1C-231	ENST00000616390	KLF16	Q9BXK1	252 aa	Predicted RBP	13.69	□□□□□ -0.22
CACNA1C-231	ENST00000616390	MRPS26	Q9BYN8	205 aa	Known RBP	13.69	□□□□□ -0.22
CACNA1C-231	ENST00000616390	RIMKLB	Q9ULI2	386 aa		13.69	□□□□□ -0.22
CACNA1C-231	ENST00000616390	PRSS21	Q9Y6M0	314 aa		13.69	□□□□□ -0.22
CACNA1C-231	ENST00000616390	AP1G1	O43747	822 aa		13.69	□□□□□ -0.22
CACNA1C-231	ENST00000616390	SLC25A14	O95258	325 aa	Predicted RBP	13.69	□□□□□ -0.22
CACNA1C-231	ENST00000616390	ENDOU	P21128	410 aa	Known RBP	13.69	□□□□□ -0.22
CACNA1C-231	ENST00000616390		Q6ZSR9	355 aa		13.69	□□□□□ -0.22
CACNA1C-231	ENST00000616390	KIAA2013	Q8IYS2	634 aa		13.69	□□□□□ -0.22
CACNA1C-231	ENST00000616390	CMTR2	Q8IYT2	770 aa	Known RBP	13.69	□□□□□ -0.22
CACNA1C-231	ENST00000616390	CYGB	Q8WWM9	190 aa		13.69	□□□□□ -0.22
CACNA1C-231	ENST00000616390	TMIGD2	Q96BF3	282 aa		13.69	□□□□□ -0.22
CACNA1C-231	ENST00000616390	ZNF597	Q96LX8	424 aa		13.69	□□□□□ -0.22
CACNA1C-231	ENST00000616390	TSEN34	Q9BSV6	310 aa	Known RBP	13.69	□□□□□ -0.22
CACNA1C-231	ENST00000616390	CLPB	Q9H078	707 aa		13.69	□□□□□ -0.22
CACNA1C-231	ENST00000616390	AIG1	Q9NVV5	245 aa		13.69	□□□□□ -0.22
CACNA1C-231	ENST00000616390	IL17C	Q9P0M4	197 aa		13.69	□□□□□ -0.22
CACNA1C-231	ENST00000616390	AFF4	Q9UHB7	1163 aa	Known RBP	13.69	□□□□□ -0.22
CACNA1C-231	ENST00000616390	PAIP2B	Q9ULR5	123 aa	Known RBP	13.69	□□□□□ -0.22
CACNA1C-231	ENST00000616390	CLEC4E	Q9ULY5	219 aa		13.69	□□□□□ -0.22
CACNA1C-231	ENST00000616390	OAZ3	Q9UMX2	235 aa		13.69	□□□□□ -0.22
CACNA1C-231	ENST00000616390	VPS9D1	Q9Y2B5	631 aa		13.69	□□□□□ -0.22
CACNA1C-231	ENST00000616390	PRMT5	O14744	637 aa	Predicted RBP	13.68	□□□□□ -0.22
CACNA1C-231	ENST00000616390	VILL	O15195	856 aa		13.68	□□□□□ -0.22
CACNA1C-231	ENST00000616390	MATN4	O95460	622 aa		13.68	□□□□□ -0.22
CACNA1C-231	ENST00000616390	G6PD	P11413	515 aa		13.68	□□□□□ -0.22
CACNA1C-231	ENST00000616390	GJA1	P17302	382 aa		13.68	□□□□□ -0.22
CACNA1C-231	ENST00000616390	PTGER3	P43115	390 aa		13.68	□□□□□ -0.22
CACNA1C-231	ENST00000616390	CLCN7	P51798	805 aa		13.68	□□□□□ -0.22
CACNA1C-231	ENST00000616390	MTPN	P58546	118 aa		13.68	□□□□□ -0.22
CACNA1C-231	ENST00000616390	PHEX	P78562	749 aa		13.68	□□□□□ -0.22
CACNA1C-231	ENST00000616390	LRRC73	Q5JTD7	316 aa		13.68	□□□□□ -0.22
CACNA1C-231	ENST00000616390	TXNDC11	Q6PKC3	985 aa		13.68	□□□□□ -0.22
CACNA1C-231	ENST00000616390	MBOAT1	Q6ZNC8	495 aa		13.68	□□□□□ -0.22
CACNA1C-231	ENST00000616390	NCCRP1	Q6ZVX7	275 aa	Predicted RBP	13.68	□□□□□ -0.22
CACNA1C-231	ENST00000616390	ERMP1	Q7Z2K6	904 aa		13.68	□□□□□ -0.22
CACNA1C-231	ENST00000616390	CHERP	Q8IWX8	916 aa	Known RBP	13.68	□□□□□ -0.22
CACNA1C-231	ENST00000616390	SFRP1	Q8N474	314 aa		13.68	□□□□□ -0.22
CACNA1C-231	ENST00000616390	TSPAN14	Q8NG11	270 aa		13.68	□□□□□ -0.22
CACNA1C-231	ENST00000616390	KCNJ9	Q92806	393 aa		13.68	□□□□□ -0.22
CACNA1C-231	ENST00000616390	TMEM125	Q96AQ2	219 aa		13.68	□□□□□ -0.22
CACNA1C-231	ENST00000616390	DGCR14	Q96DF8	476 aa	Known RBP	13.68	□□□□□ -0.22
CACNA1C-231	ENST00000616390	IGSF21	Q96ID5	467 aa		13.68	□□□□□ -0.22
CACNA1C-231	ENST00000616390	OSBPL11	Q9BXB4	747 aa		13.68	□□□□□ -0.22
CACNA1C-231	ENST00000616390	SOX17	Q9H6I2	414 aa	Predicted RBP	13.68	□□□□□ -0.22
CACNA1C-231	ENST00000616390	IPPK	Q9H8X2	491 aa		13.68	□□□□□ -0.22
CACNA1C-231	ENST00000616390	CCM2L	Q9NUG4	571 aa	Predicted RBP	13.68	□□□□□ -0.22
CACNA1C-231	ENST00000616390	POLR3H	Q9Y535	204 aa	Predicted RBP	13.68	□□□□□ -0.22
CACNA1C-231	ENST00000616390	ANGPTL3	Q9Y5C1	460 aa		13.68	□□□□□ -0.22
CACNA1C-231	ENST00000616390	PCDHA9	Q9Y5H5	950 aa		13.68	□□□□□ -0.22
CACNA1C-231	ENST00000616390	CPQ	Q9Y646	472 aa		13.68	□□□□□ -0.22
CACNA1C-231	ENST00000616390	STX16	O14662	325 aa		13.68	□□□□□ -0.22
CACNA1C-231	ENST00000616390	SGTA	O43765	313 aa		13.68	□□□□□ -0.22
CACNA1C-231	ENST00000616390	S100B	P04271	92 aa	Predicted RBP	13.68	□□□□□ -0.22
CACNA1C-231	ENST00000616390	CYP4F8	P98187	520 aa		13.68	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms