RNA–Protein interactions for RNA: ENST00000616247.4

LMO3-235, Transcript of LIM domain only 3, humanhuman

TSL 5 BASIC

Gene LMO3, Length 3,227 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-235ENST00000616247 LOC110117498-PIK3R3F6TDL0 507 aa6.59□□□□□ -1.35
LMO3-235ENST00000616247 hCG_2039718K7EN88 272 aa6.59□□□□□ -1.35
LMO3-235ENST00000616247 PSMD3O43242 534 aa6.59□□□□□ -1.35
LMO3-235ENST00000616247 SSX4O60224 188 aa6.59□□□□□ -1.35
LMO3-235ENST00000616247 APBA3O96018 575 aa6.59□□□□□ -1.35
LMO3-235ENST00000616247 ABCB1P08183 1280 aaPredicted RBP6.59□□□□□ -1.35
LMO3-235ENST00000616247 PRSS56P0CW18 603 aa6.59□□□□□ -1.35
LMO3-235ENST00000616247 NAT1P18440 290 aa6.59□□□□□ -1.35
LMO3-235ENST00000616247 BMPR1AP36894 532 aa6.59□□□□□ -1.35
LMO3-235ENST00000616247 IDH2P48735 452 aaKnown RBP6.59□□□□□ -1.35
LMO3-235ENST00000616247 EEFSECP57772 596 aaKnown RBP6.59□□□□□ -1.35
LMO3-235ENST00000616247 FKBP1AP62942 108 aaKnown RBP6.59□□□□□ -1.35
LMO3-235ENST00000616247 CD83Q01151 205 aa6.59□□□□□ -1.35
LMO3-235ENST00000616247 GHRHRQ02643 423 aa6.59□□□□□ -1.35
LMO3-235ENST00000616247 KCNC4Q03721 635 aa6.59□□□□□ -1.35
LMO3-235ENST00000616247 CDK5R2Q13319 367 aa6.59□□□□□ -1.35
LMO3-235ENST00000616247 TNFAIP1Q13829 316 aa6.59□□□□□ -1.35
LMO3-235ENST00000616247 OR4D1Q15615 310 aa6.59□□□□□ -1.35
LMO3-235ENST00000616247 CRY1Q16526 586 aa6.59□□□□□ -1.35
LMO3-235ENST00000616247 PKDCCQ504Y2 493 aa6.59□□□□□ -1.35
LMO3-235ENST00000616247 WSCD1Q658N2 575 aa6.59□□□□□ -1.35
LMO3-235ENST00000616247 TMEM207Q6UWW9 146 aa6.59□□□□□ -1.35
LMO3-235ENST00000616247 TRIM48Q8IWZ4 208 aa6.59□□□□□ -1.35
LMO3-235ENST00000616247 AMER2Q8N7J2 671 aa6.59□□□□□ -1.35
LMO3-235ENST00000616247 C2CD4AQ8NCU7 369 aaPredicted RBP6.59□□□□□ -1.35
LMO3-235ENST00000616247 ZNF641Q96N77 438 aaPredicted RBP6.59□□□□□ -1.35
LMO3-235ENST00000616247 NPY6RQ99463 290 aa6.59□□□□□ -1.35
LMO3-235ENST00000616247 VAT1Q99536 393 aa6.59□□□□□ -1.35
LMO3-235ENST00000616247 TSEN34Q9BSV6 310 aaKnown RBP6.59□□□□□ -1.35
LMO3-235ENST00000616247 EMILIN2Q9BXX0 1053 aa6.59□□□□□ -1.35
LMO3-235ENST00000616247 NXF3Q9H4D5 531 aaKnown RBP6.59□□□□□ -1.35
LMO3-235ENST00000616247 RNF167Q9H6Y7 350 aa6.59□□□□□ -1.35
LMO3-235ENST00000616247 RUBCNLQ9H714 662 aa6.59□□□□□ -1.35
LMO3-235ENST00000616247 PDGFCQ9NRA1 345 aa6.59□□□□□ -1.35
LMO3-235ENST00000616247 ABCD2Q9UBJ2 740 aa6.59□□□□□ -1.35
LMO3-235ENST00000616247 INTS6Q9UL03 887 aaKnown RBP6.59□□□□□ -1.35
LMO3-235ENST00000616247 TCRBV5S2A0A599 114 aa6.59□□□□□ -1.36
LMO3-235ENST00000616247 ZNF487B1APH4 448 aa6.59□□□□□ -1.36
LMO3-235ENST00000616247 TNFRSF10AO00220 468 aa6.59□□□□□ -1.36
LMO3-235ENST00000616247 MEN1O00255 615 aa6.59□□□□□ -1.36
LMO3-235ENST00000616247 AP3D1O14617 1153 aa6.59□□□□□ -1.36
LMO3-235ENST00000616247 MGEA5O60502 916 aa6.59□□□□□ -1.36
LMO3-235ENST00000616247 CPNE3O75131 537 aaKnown RBP6.59□□□□□ -1.36
LMO3-235ENST00000616247 RECQL4O94761 1208 aa6.59□□□□□ -1.36
LMO3-235ENST00000616247 CYP11A1P05108 521 aa6.59□□□□□ -1.36
LMO3-235ENST00000616247 HLA-DQB2P05538 268 aa6.59□□□□□ -1.36
LMO3-235ENST00000616247 CAPN1P07384 714 aa6.59□□□□□ -1.36
LMO3-235ENST00000616247 NPR3P17342 541 aa6.59□□□□□ -1.36
LMO3-235ENST00000616247 PFKLP17858 780 aa6.59□□□□□ -1.36
LMO3-235ENST00000616247 ICAM3P32942 547 aa6.59□□□□□ -1.36
LMO3-235ENST00000616247 ARCN1P48444 511 aaKnown RBP6.59□□□□□ -1.36
LMO3-235ENST00000616247 SERPINH1P50454 418 aaKnown RBP6.59□□□□□ -1.36
LMO3-235ENST00000616247 CCDC85BQ15834 202 aaPredicted RBP6.59□□□□□ -1.36
LMO3-235ENST00000616247 FAM209AQ5JX71 171 aa6.59□□□□□ -1.36
LMO3-235ENST00000616247 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP6.59□□□□□ -1.36
LMO3-235ENST00000616247 EFL1Q7Z2Z2 1120 aaKnown RBP6.59□□□□□ -1.36
LMO3-235ENST00000616247 FAM83AQ86UY5 434 aa6.59□□□□□ -1.36
LMO3-235ENST00000616247 ANKRD46Q86W74 232 aa6.59□□□□□ -1.36
LMO3-235ENST00000616247 ELMOD2Q8IZ81 293 aa6.59□□□□□ -1.36
LMO3-235ENST00000616247 TMEM199Q8N511 208 aa6.59□□□□□ -1.36
LMO3-235ENST00000616247 OR7G1Q8NGA0 311 aa6.59□□□□□ -1.36
LMO3-235ENST00000616247 MTFMTQ96DP5 389 aaKnown RBP6.59□□□□□ -1.36
LMO3-235ENST00000616247 FAM120BQ96EK7 910 aaKnown RBP6.59□□□□□ -1.36
LMO3-235ENST00000616247 Q96MT0 163 aa6.59□□□□□ -1.36
LMO3-235ENST00000616247 GPR20Q99678 358 aa6.59□□□□□ -1.36
LMO3-235ENST00000616247 CPNE5Q9HCH3 593 aa6.59□□□□□ -1.36
LMO3-235ENST00000616247 WDR6Q9NNW5 1121 aaKnown RBP6.59□□□□□ -1.36
LMO3-235ENST00000616247 MYOZ2Q9NPC6 264 aa6.59□□□□□ -1.36
LMO3-235ENST00000616247 TYW5A2RUC4 315 aaKnown RBP6.58□□□□□ -1.36
LMO3-235ENST00000616247 NPEPPSL1A6NEC2 478 aa6.58□□□□□ -1.36
LMO3-235ENST00000616247 I6L893 689 aaPredicted RBP6.58□□□□□ -1.36
LMO3-235ENST00000616247 M0QX08 132 aa6.58□□□□□ -1.36
LMO3-235ENST00000616247 CDC7O00311 574 aa6.58□□□□□ -1.36
LMO3-235ENST00000616247 GLP2RO95838 553 aa6.58□□□□□ -1.36
LMO3-235ENST00000616247 GUCA1CO95843 209 aa6.58□□□□□ -1.36
LMO3-235ENST00000616247 CNPP09543 421 aaKnown RBP6.58□□□□□ -1.36
LMO3-235ENST00000616247 SLC2A3P11169 496 aa6.58□□□□□ -1.36
LMO3-235ENST00000616247 G6PDP11413 515 aa6.58□□□□□ -1.36
LMO3-235ENST00000616247 MYCLP1P12525 358 aaPredicted RBP6.58□□□□□ -1.36
LMO3-235ENST00000616247 RPL38P63173 70 aaKnown RBP6.58□□□□□ -1.36
LMO3-235ENST00000616247 LCP2Q13094 533 aa6.58□□□□□ -1.36
LMO3-235ENST00000616247 E2F2Q14209 437 aa6.58□□□□□ -1.36
LMO3-235ENST00000616247 MAPKAPK3Q16644 382 aa6.58□□□□□ -1.36
LMO3-235ENST00000616247 CLPPQ16740 277 aaPredicted RBP6.58□□□□□ -1.36
LMO3-235ENST00000616247 TBRG1Q3YBR2 411 aa6.58□□□□□ -1.36
LMO3-235ENST00000616247 GTDC1Q4AE62 458 aa6.58□□□□□ -1.36
LMO3-235ENST00000616247 WDR45BQ5MNZ6 344 aa6.58□□□□□ -1.36
LMO3-235ENST00000616247 DENND5AQ6IQ26 1287 aa6.58□□□□□ -1.36
LMO3-235ENST00000616247 DEFB132Q7Z7B7 95 aa6.58□□□□□ -1.36
LMO3-235ENST00000616247 HORMAD1Q86X24 394 aa6.58□□□□□ -1.36
LMO3-235ENST00000616247 METTL4Q8N3J2 472 aa6.58□□□□□ -1.36
LMO3-235ENST00000616247 ATP6V0D2Q8N8Y2 350 aa6.58□□□□□ -1.36
LMO3-235ENST00000616247 CNDP2Q96KP4 475 aaKnown RBP6.58□□□□□ -1.36
LMO3-235ENST00000616247 OSMRQ99650 979 aa6.58□□□□□ -1.36
LMO3-235ENST00000616247 EIF2B4Q9UI10 523 aaKnown RBP6.58□□□□□ -1.36
LMO3-235ENST00000616247 SATB2Q9UPW6 733 aa6.58□□□□□ -1.36
LMO3-235ENST00000616247 PIN4Q9Y237 131 aaKnown RBP6.58□□□□□ -1.36
LMO3-235ENST00000616247 KLHL20Q9Y2M5 609 aa6.58□□□□□ -1.36
LMO3-235ENST00000616247 PCDHB14Q9Y5E9 798 aa6.58□□□□□ -1.36
LMO3-235ENST00000616247 SOWAHBA6NEL2 793 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms