RNA–Protein interactions for RNA: ENST00000616179.4

SYNRG-223, Transcript of synergin gamma, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SYNRG, Length 4,050 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNRG-223ENST00000616179 SBK3P0C264 359 aa15.45■□□□□ 0.06
SYNRG-223ENST00000616179 EEFSECP57772 596 aaKnown RBP15.45■□□□□ 0.06
SYNRG-223ENST00000616179 PYDC2Q56P42 97 aa15.45■□□□□ 0.06
SYNRG-223ENST00000616179 CCSAPQ6IQ19 270 aaPredicted RBP15.45■□□□□ 0.06
SYNRG-223ENST00000616179 ZNF605Q86T29 641 aa15.45■□□□□ 0.06
SYNRG-223ENST00000616179 CNPPD1Q9BV87 410 aa15.45■□□□□ 0.06
SYNRG-223ENST00000616179 MAP3K20Q9NYL2 800 aaKnown RBP15.45■□□□□ 0.06
SYNRG-223ENST00000616179 GALPQ9UBC7 116 aa15.45■□□□□ 0.06
SYNRG-223ENST00000616179 RNF6Q9Y252 685 aa15.45■□□□□ 0.06
SYNRG-223ENST00000616179 CXCR6O00574 342 aa15.45■□□□□ 0.06
SYNRG-223ENST00000616179 DPYSL4O14531 572 aa15.45■□□□□ 0.06
SYNRG-223ENST00000616179 CTSKP43235 329 aa15.45■□□□□ 0.06
SYNRG-223ENST00000616179 SMARCB1Q12824 385 aa15.45■□□□□ 0.06
SYNRG-223ENST00000616179 PTPRCAPQ14761 206 aa15.45■□□□□ 0.06
SYNRG-223ENST00000616179 FBXO47Q5MNV8 452 aa15.45■□□□□ 0.06
SYNRG-223ENST00000616179 ZNF678Q5SXM1 525 aa15.45■□□□□ 0.06
SYNRG-223ENST00000616179 TXNDC11Q6PKC3 985 aa15.45■□□□□ 0.06
SYNRG-223ENST00000616179 LARP4Q71RC2 724 aaKnown RBP eCLIP15.45■□□□□ 0.06
SYNRG-223ENST00000616179 SCN4BQ8IWT1 228 aa15.45■□□□□ 0.06
SYNRG-223ENST00000616179 TMEM174Q8WUU8 243 aa15.45■□□□□ 0.06
SYNRG-223ENST00000616179 SLC35F5Q8WV83 523 aa15.45■□□□□ 0.06
SYNRG-223ENST00000616179 VPS35Q96QK1 796 aa15.45■□□□□ 0.06
SYNRG-223ENST00000616179 ZSCAN5AQ9BUG6 496 aa15.45■□□□□ 0.06
SYNRG-223ENST00000616179 MMP28Q9H239 520 aa15.45■□□□□ 0.06
SYNRG-223ENST00000616179 REEP1Q9H902 201 aa15.45■□□□□ 0.06
SYNRG-223ENST00000616179 INTS6Q9UL03 887 aaKnown RBP15.45■□□□□ 0.06
SYNRG-223ENST00000616179 LAMB1P07942 1786 aa15.45■□□□□ 0.06
SYNRG-223ENST00000616179 ISPDA4D126 451 aa15.45■□□□□ 0.06
SYNRG-223ENST00000616179 SNTNA6NMZ2 147 aa15.45■□□□□ 0.06
SYNRG-223ENST00000616179 I3L521 148 aa15.45■□□□□ 0.06
SYNRG-223ENST00000616179 SH3BGRLO75368 114 aa15.45■□□□□ 0.06
SYNRG-223ENST00000616179 ITGBL1O95965 494 aaPredicted RBP15.45■□□□□ 0.06
SYNRG-223ENST00000616179 CCNYL3P0C7X3 344 aa15.45■□□□□ 0.06
SYNRG-223ENST00000616179 ARF4P18085 180 aaPredicted RBP15.45■□□□□ 0.06
SYNRG-223ENST00000616179 GP2P55259 537 aaKnown RBP15.45■□□□□ 0.06
SYNRG-223ENST00000616179 HERVK_113P63132 956 aa15.45■□□□□ 0.06
SYNRG-223ENST00000616179 QPRTQ15274 297 aa15.45■□□□□ 0.06
SYNRG-223ENST00000616179 TSNQ15631 228 aaKnown RBP15.45■□□□□ 0.06
SYNRG-223ENST00000616179 AP5B1Q2VPB7 878 aa15.45■□□□□ 0.06
SYNRG-223ENST00000616179 UNC50Q53HI1 259 aa15.45■□□□□ 0.06
SYNRG-223ENST00000616179 TSTD2Q5T7W7 516 aa15.45■□□□□ 0.06
SYNRG-223ENST00000616179 NIM1KQ8IY84 436 aa15.45■□□□□ 0.06
SYNRG-223ENST00000616179 OR56A4Q8NGH8 313 aa15.45■□□□□ 0.06
SYNRG-223ENST00000616179 OR5H6Q8NGV6 325 aa15.45■□□□□ 0.06
SYNRG-223ENST00000616179 STAG3L4Q8TBR4 150 aa15.45■□□□□ 0.06
SYNRG-223ENST00000616179 ERVK-6Q9BXR3 956 aa15.45■□□□□ 0.06
SYNRG-223ENST00000616179 TNFSF13BQ9Y275 285 aa15.45■□□□□ 0.06
SYNRG-223ENST00000616179 DLEC1Q9Y238 1755 aa15.45■□□□□ 0.06
SYNRG-223ENST00000616179 STX7O15400 261 aaKnown RBP15.44■□□□□ 0.06
SYNRG-223ENST00000616179 SNX4O95219 450 aa15.44■□□□□ 0.06
SYNRG-223ENST00000616179 C7P10643 843 aa15.44■□□□□ 0.06
SYNRG-223ENST00000616179 AXLP30530 894 aa15.44■□□□□ 0.06
SYNRG-223ENST00000616179 TUBA1BP68363 451 aa15.44■□□□□ 0.06
SYNRG-223ENST00000616179 ADARB1P78563 741 aaKnown RBP15.44■□□□□ 0.06
SYNRG-223ENST00000616179 CDK5R2Q13319 367 aa15.44■□□□□ 0.06
SYNRG-223ENST00000616179 BCL7AQ4VC05 210 aa15.44■□□□□ 0.06
SYNRG-223ENST00000616179 XAF1Q6GPH4 301 aa15.44■□□□□ 0.06
SYNRG-223ENST00000616179 TUBA1AQ71U36 451 aa15.44■□□□□ 0.06
SYNRG-223ENST00000616179 OR52J3Q8NH60 311 aa15.44■□□□□ 0.06
SYNRG-223ENST00000616179 GLOD4Q9HC38 313 aa15.44■□□□□ 0.06
SYNRG-223ENST00000616179 NECTIN3Q9NQS3 549 aa15.44■□□□□ 0.06
SYNRG-223ENST00000616179 MPP6Q9NZW5 540 aa15.44■□□□□ 0.06
SYNRG-223ENST00000616179 RREB1Q92766 1687 aa15.44■□□□□ 0.06
SYNRG-223ENST00000616179 DLGAP1O14490 977 aa15.44■□□□□ 0.06
SYNRG-223ENST00000616179 CPNE6O95741 557 aa15.44■□□□□ 0.06
SYNRG-223ENST00000616179 GADD45AP24522 165 aa15.44■□□□□ 0.06
SYNRG-223ENST00000616179 UQCRC1P31930 480 aa15.44■□□□□ 0.06
SYNRG-223ENST00000616179 YBX1P67809 324 aaKnown RBP15.44■□□□□ 0.06
SYNRG-223ENST00000616179 CYP4F8P98187 520 aa15.44■□□□□ 0.06
SYNRG-223ENST00000616179 ZNF267Q14586 743 aaPredicted RBP15.44■□□□□ 0.06
SYNRG-223ENST00000616179 PAN2Q504Q3 1202 aaKnown RBP15.44■□□□□ 0.06
SYNRG-223ENST00000616179 ZRANB3Q5FWF4 1079 aa15.44■□□□□ 0.06
SYNRG-223ENST00000616179 AGAP6Q5VW22 663 aa15.44■□□□□ 0.06
SYNRG-223ENST00000616179 ZDHHC21Q8IVQ6 265 aa15.44■□□□□ 0.06
SYNRG-223ENST00000616179 PELI3Q8N2H9 469 aa15.44■□□□□ 0.06
SYNRG-223ENST00000616179 CERKQ8TCT0 537 aa15.44■□□□□ 0.06
SYNRG-223ENST00000616179 AGAP4Q96P64 663 aa15.44■□□□□ 0.06
SYNRG-223ENST00000616179 DOK1Q99704 481 aa15.44■□□□□ 0.06
SYNRG-223ENST00000616179 MMP27Q9H306 513 aa15.44■□□□□ 0.06
SYNRG-223ENST00000616179 AKIP1Q9NQ31 210 aa15.44■□□□□ 0.06
SYNRG-223ENST00000616179 SNTG1Q9NSN8 517 aa15.44■□□□□ 0.06
SYNRG-223ENST00000616179 PEX16Q9Y5Y5 336 aa15.44■□□□□ 0.06
SYNRG-223ENST00000616179 DFNA5O60443 496 aa15.44■□□□□ 0.06
SYNRG-223ENST00000616179 ALPLP05186 524 aa15.44■□□□□ 0.06
SYNRG-223ENST00000616179 HNF4AP41235 474 aa15.44■□□□□ 0.06
SYNRG-223ENST00000616179 TNFAIP1Q13829 316 aa15.44■□□□□ 0.06
SYNRG-223ENST00000616179 CTU2Q2VPK5 515 aaKnown RBP15.44■□□□□ 0.06
SYNRG-223ENST00000616179 FAM174BQ3ZCQ3 159 aa15.44■□□□□ 0.06
SYNRG-223ENST00000616179 SOWAHCQ53LP3 525 aaPredicted RBP15.44■□□□□ 0.06
SYNRG-223ENST00000616179 BLOC1S3Q6QNY0 202 aa15.44■□□□□ 0.06
SYNRG-223ENST00000616179 SLX1AQ9BQ83 275 aa15.44■□□□□ 0.06
SYNRG-223ENST00000616179 PRKD2Q9BZL6 878 aa15.44■□□□□ 0.06
SYNRG-223ENST00000616179 PDLIM7Q9NR12 457 aa15.44■□□□□ 0.06
SYNRG-223ENST00000616179 FAM8A1Q9UBU6 413 aa15.44■□□□□ 0.06
SYNRG-223ENST00000616179 PKP3Q9Y446 797 aa15.44■□□□□ 0.06
SYNRG-223ENST00000616179 PCDHGA10Q9Y5H3 936 aa15.44■□□□□ 0.06
SYNRG-223ENST00000616179 MAFBQ9Y5Q3 323 aaPredicted RBP15.44■□□□□ 0.06
SYNRG-223ENST00000616179 EPN2O95208 641 aa15.43■□□□□ 0.06
SYNRG-223ENST00000616179 TSPAN19P0C672 248 aa15.43■□□□□ 0.06
SYNRG-223ENST00000616179 INSRRP14616 1297 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms