RNA–Protein interactions for RNA: ENST00000616074.4

TRAPPC3-208, Transcript of trafficking protein particle complex 3, humanhuman

TSL 5 BASIC

Gene TRAPPC3, Length 1,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-208ENST00000616074 CFAP20Q9Y6A4 193 aaKnown RBP20.32■□□□□ 0.84
TRAPPC3-208ENST00000616074 DNMT3AQ9Y6K1 912 aaPredicted RBP20.32■□□□□ 0.84
TRAPPC3-208ENST00000616074 CREG1O75629 220 aa20.31■□□□□ 0.84
TRAPPC3-208ENST00000616074 EBLN1P0CF75 366 aa20.31■□□□□ 0.84
TRAPPC3-208ENST00000616074 MTHFD1P11586 935 aaKnown RBP20.31■□□□□ 0.84
TRAPPC3-208ENST00000616074 HADHBP55084 474 aaKnown RBP20.31■□□□□ 0.84
TRAPPC3-208ENST00000616074 FNBP1LQ5T0N5 605 aa20.31■□□□□ 0.84
TRAPPC3-208ENST00000616074 PWWP2BQ6NUJ5 590 aa20.31■□□□□ 0.84
TRAPPC3-208ENST00000616074 DUS1LQ6P1R4 473 aaKnown RBP20.31■□□□□ 0.84
TRAPPC3-208ENST00000616074 KLHL35Q6PF15 583 aa20.31■□□□□ 0.84
TRAPPC3-208ENST00000616074 DET1Q7L5Y6 550 aa20.31■□□□□ 0.84
TRAPPC3-208ENST00000616074 CNGA4Q8IV77 575 aa20.31■□□□□ 0.84
TRAPPC3-208ENST00000616074 CCDC50Q8IVM0 306 aa20.31■□□□□ 0.84
TRAPPC3-208ENST00000616074 KATNAL2Q8IYT4 538 aa20.31■□□□□ 0.84
TRAPPC3-208ENST00000616074 NAT14Q8WUY8 206 aa20.31■□□□□ 0.84
TRAPPC3-208ENST00000616074 GORASP1Q9BQQ3 440 aa20.31■□□□□ 0.84
TRAPPC3-208ENST00000616074 FSD1LQ9BXM9 530 aa20.31■□□□□ 0.84
TRAPPC3-208ENST00000616074 TWSG1Q9GZX9 223 aa20.31■□□□□ 0.84
TRAPPC3-208ENST00000616074 OR5K3A6NET4 321 aa20.3■□□□□ 0.84
TRAPPC3-208ENST00000616074 HACD1B0YJ81 288 aa20.3■□□□□ 0.84
TRAPPC3-208ENST00000616074 STX7O15400 261 aaKnown RBP20.3■□□□□ 0.84
TRAPPC3-208ENST00000616074 ZRANB2O95218 330 aaKnown RBP eCLIP20.3■□□□□ 0.84
TRAPPC3-208ENST00000616074 PRAMEF1O95521 474 aa20.3■□□□□ 0.84
TRAPPC3-208ENST00000616074 AGTP01019 485 aa20.3■□□□□ 0.84
TRAPPC3-208ENST00000616074 MSH3P20585 1137 aa20.3■□□□□ 0.84
TRAPPC3-208ENST00000616074 AKT1P31749 480 aa20.3■□□□□ 0.84
TRAPPC3-208ENST00000616074 SRSF1Q07955 248 aaKnown RBP eCLIP20.3■□□□□ 0.84
TRAPPC3-208ENST00000616074 KLRB1Q12918 225 aa20.3■□□□□ 0.84
TRAPPC3-208ENST00000616074 XRCC4Q13426 336 aa20.3■□□□□ 0.84
TRAPPC3-208ENST00000616074 LONRF2Q1L5Z9 754 aa20.3■□□□□ 0.84
TRAPPC3-208ENST00000616074 DNTTIP2Q5QJE6 756 aaKnown RBP20.3■□□□□ 0.84
TRAPPC3-208ENST00000616074 METRNLQ641Q3 311 aa20.3■□□□□ 0.84
TRAPPC3-208ENST00000616074 ZNF398Q8TD17 642 aa20.3■□□□□ 0.84
TRAPPC3-208ENST00000616074 RUFY1Q96T51 708 aa20.3■□□□□ 0.84
TRAPPC3-208ENST00000616074 INSM2Q96T92 566 aaPredicted RBP20.3■□□□□ 0.84
TRAPPC3-208ENST00000616074 WWP1Q9H0M0 922 aa20.3■□□□□ 0.84
TRAPPC3-208ENST00000616074 C10orf88Q9H8K7 445 aa20.3■□□□□ 0.84
TRAPPC3-208ENST00000616074 AKIRIN1Q9H9L7 192 aaPredicted RBP20.3■□□□□ 0.84
TRAPPC3-208ENST00000616074 ARL5AQ9Y689 179 aa20.3■□□□□ 0.84
TRAPPC3-208ENST00000616074 LRRK2Q5S007 2527 aa20.3■□□□□ 0.84
TRAPPC3-208ENST00000616074 PIPSLA2A3N6 862 aa20.29■□□□□ 0.84
TRAPPC3-208ENST00000616074 TLCD2A6NGC4 264 aa20.29■□□□□ 0.84
TRAPPC3-208ENST00000616074 C21orf140B9A014 251 aa20.29■□□□□ 0.84
TRAPPC3-208ENST00000616074 AKR1B15C9JRZ8 316 aaPredicted RBP20.29■□□□□ 0.84
TRAPPC3-208ENST00000616074 MKRN2OSH3BPM6 223 aa20.29■□□□□ 0.84
TRAPPC3-208ENST00000616074 RFPL1O75677 317 aa20.29■□□□□ 0.84
TRAPPC3-208ENST00000616074 NTRK1P04629 796 aa20.29■□□□□ 0.84
TRAPPC3-208ENST00000616074 RBL1P28749 1068 aa20.29■□□□□ 0.84
TRAPPC3-208ENST00000616074 MAGEA1P43355 309 aa20.29■□□□□ 0.84
TRAPPC3-208ENST00000616074 ACY1Q03154 408 aa20.29■□□□□ 0.84
TRAPPC3-208ENST00000616074 TCTN3Q6NUS6 607 aa20.29■□□□□ 0.84
TRAPPC3-208ENST00000616074 RCOR2Q8IZ40 523 aa20.29■□□□□ 0.84
TRAPPC3-208ENST00000616074 KRT35Q92764 455 aa20.29■□□□□ 0.84
TRAPPC3-208ENST00000616074 ZNF514Q96K75 400 aaPredicted RBP20.29■□□□□ 0.84
TRAPPC3-208ENST00000616074 C12orf66Q96MD2 445 aa20.29■□□□□ 0.84
TRAPPC3-208ENST00000616074 FCRL4Q96PJ5 515 aa20.29■□□□□ 0.84
TRAPPC3-208ENST00000616074 CD180Q99467 661 aa20.29■□□□□ 0.84
TRAPPC3-208ENST00000616074 FICDQ9BVA6 458 aa20.29■□□□□ 0.84
TRAPPC3-208ENST00000616074 GBA3Q9H227 469 aa20.29■□□□□ 0.84
TRAPPC3-208ENST00000616074 ACTL8Q9H568 366 aa20.29■□□□□ 0.84
TRAPPC3-208ENST00000616074 HRASLS2Q9NWW9 162 aa20.29■□□□□ 0.84
TRAPPC3-208ENST00000616074 TRHDEQ9UKU6 1024 aa20.29■□□□□ 0.84
TRAPPC3-208ENST00000616074 TFR2Q9UP52 801 aa20.29■□□□□ 0.84
TRAPPC3-208ENST00000616074 UBA6A0AVT1 1052 aaPredicted RBP20.28■□□□□ 0.84
TRAPPC3-208ENST00000616074 MGAT4DA6NG13 374 aa20.28■□□□□ 0.84
TRAPPC3-208ENST00000616074 RECKO95980 971 aa20.28■□□□□ 0.84
TRAPPC3-208ENST00000616074 PTMSP20962 102 aa20.28■□□□□ 0.84
TRAPPC3-208ENST00000616074 ARL4DP49703 201 aa20.28■□□□□ 0.84
TRAPPC3-208ENST00000616074 PMS2P54278 862 aa20.28■□□□□ 0.84
TRAPPC3-208ENST00000616074 TBX2Q13207 712 aaPredicted RBP20.28■□□□□ 0.84
TRAPPC3-208ENST00000616074 OLIG2Q13516 323 aa20.28■□□□□ 0.84
TRAPPC3-208ENST00000616074 UBAP2LQ14157 1087 aaKnown RBP20.28■□□□□ 0.84
TRAPPC3-208ENST00000616074 FAM199XQ6PEV8 388 aaPredicted RBP20.28■□□□□ 0.84
TRAPPC3-208ENST00000616074 BBS12Q6ZW61 710 aa20.28■□□□□ 0.84
TRAPPC3-208ENST00000616074 OOSP2Q86WS3 158 aa20.28■□□□□ 0.84
TRAPPC3-208ENST00000616074 KMT5CQ86Y97 462 aa20.28■□□□□ 0.84
TRAPPC3-208ENST00000616074 RNF214Q8ND24 703 aa20.28■□□□□ 0.84
TRAPPC3-208ENST00000616074 SPDYE1Q8NFV5 336 aaPredicted RBP20.28■□□□□ 0.84
TRAPPC3-208ENST00000616074 RBM41Q96IZ5 413 aaKnown RBP20.28■□□□□ 0.84
TRAPPC3-208ENST00000616074 HEMGNQ9BXL5 484 aa20.28■□□□□ 0.84
TRAPPC3-208ENST00000616074 FGF21Q9NSA1 209 aa20.28■□□□□ 0.84
TRAPPC3-208ENST00000616074 ANKMY1Q9P2S6 941 aa20.28■□□□□ 0.84
TRAPPC3-208ENST00000616074 FAM8A1Q9UBU6 413 aa20.28■□□□□ 0.84
TRAPPC3-208ENST00000616074 FKBPLQ9UIM3 349 aa20.28■□□□□ 0.84
TRAPPC3-208ENST00000616074 TLK1Q9UKI8 766 aa20.28■□□□□ 0.84
TRAPPC3-208ENST00000616074 PLAAQ9Y263 795 aa20.28■□□□□ 0.84
TRAPPC3-208ENST00000616074 MAN2B2Q9Y2E5 1009 aa20.28■□□□□ 0.84
TRAPPC3-208ENST00000616074 TNRC6AQ8NDV7 1962 aaKnown RBP20.27■□□□□ 0.84
TRAPPC3-208ENST00000616074 H7C0C1 242 aa20.27■□□□□ 0.84
TRAPPC3-208ENST00000616074 APOC4-APOC2K7ER74 178 aa20.27■□□□□ 0.84
TRAPPC3-208ENST00000616074 APOC2P02655 101 aa20.27■□□□□ 0.84
TRAPPC3-208ENST00000616074 LPOP22079 712 aaPredicted RBP20.27■□□□□ 0.84
TRAPPC3-208ENST00000616074 ATP5OP48047 213 aa20.27■□□□□ 0.84
TRAPPC3-208ENST00000616074 GEMP55040 296 aa20.27■□□□□ 0.84
TRAPPC3-208ENST00000616074 RPS18P62269 152 aaKnown RBP20.27■□□□□ 0.84
TRAPPC3-208ENST00000616074 HSD11B2P80365 405 aa20.27■□□□□ 0.84
TRAPPC3-208ENST00000616074 TAF1AQ15573 450 aaPredicted RBP20.27■□□□□ 0.84
TRAPPC3-208ENST00000616074 BPHLQ86WA6 291 aaPredicted RBP20.27■□□□□ 0.84
TRAPPC3-208ENST00000616074 D2HGDHQ8N465 521 aa20.27■□□□□ 0.84
TRAPPC3-208ENST00000616074 OR4K2Q8NGD2 314 aa20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms