RNA–Protein interactions for RNA: ENST00000614547.4

CDH5-208, Transcript of cadherin 5, humanhuman

TSL 1 (best) BASIC

Gene CDH5, Length 3,779 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH5-208ENST00000614547 SNX27Q96L92 541 aa11.64□□□□□ -0.55
CDH5-208ENST00000614547 C12orf42Q96LP6 360 aa11.64□□□□□ -0.55
CDH5-208ENST00000614547 VTA1Q9NP79 307 aa11.64□□□□□ -0.55
CDH5-208ENST00000614547 CENPXA8MT69 81 aa11.64□□□□□ -0.55
CDH5-208ENST00000614547 NOTOA8MTQ0 251 aa11.64□□□□□ -0.55
CDH5-208ENST00000614547 DNTTP04053 509 aa11.64□□□□□ -0.55
CDH5-208ENST00000614547 IFI30P13284 250 aa11.64□□□□□ -0.55
CDH5-208ENST00000614547 MSH3P20585 1137 aa11.64□□□□□ -0.55
CDH5-208ENST00000614547 GDF5P43026 501 aa11.64□□□□□ -0.55
CDH5-208ENST00000614547 HSPA7P48741 367 aa11.64□□□□□ -0.55
CDH5-208ENST00000614547 RPS3AP61247 264 aaKnown RBP11.64□□□□□ -0.55
CDH5-208ENST00000614547 MED22Q15528 200 aa11.64□□□□□ -0.55
CDH5-208ENST00000614547 ATAD3BQ5T9A4 648 aa11.64□□□□□ -0.55
CDH5-208ENST00000614547 FAM117BQ6P1L5 589 aa11.64□□□□□ -0.55
CDH5-208ENST00000614547 KIAA0408Q6ZU52 694 aa11.64□□□□□ -0.55
CDH5-208ENST00000614547 GLT6D1Q7Z4J2 308 aa11.64□□□□□ -0.55
CDH5-208ENST00000614547 RASAL3Q86YV0 1011 aa11.64□□□□□ -0.55
CDH5-208ENST00000614547 FAM86B1Q8N7N1 296 aa11.64□□□□□ -0.55
CDH5-208ENST00000614547 OR4L1Q8NH43 312 aa11.64□□□□□ -0.55
CDH5-208ENST00000614547 TMEM125Q96AQ2 219 aa11.64□□□□□ -0.55
CDH5-208ENST00000614547 HMCESQ96FZ2 354 aa11.64□□□□□ -0.55
CDH5-208ENST00000614547 CGREF1Q99674 301 aa11.64□□□□□ -0.55
CDH5-208ENST00000614547 TRIM54Q9BYV2 358 aa11.64□□□□□ -0.55
CDH5-208ENST00000614547 FAM118AQ9NWS6 357 aa11.64□□□□□ -0.55
CDH5-208ENST00000614547 OGDHLQ9ULD0 1010 aa11.64□□□□□ -0.55
CDH5-208ENST00000614547 ELOVL7A1L3X0 281 aa11.63□□□□□ -0.55
CDH5-208ENST00000614547 TYW5A2RUC4 315 aaKnown RBP11.63□□□□□ -0.55
CDH5-208ENST00000614547 UPK3BL1B0FP48 263 aa11.63□□□□□ -0.55
CDH5-208ENST00000614547 UPK3BL2E5RIL1 263 aa11.63□□□□□ -0.55
CDH5-208ENST00000614547 GJB3O75712 270 aa11.63□□□□□ -0.55
CDH5-208ENST00000614547 MT-ND2P03891 347 aa11.63□□□□□ -0.55
CDH5-208ENST00000614547 ENO2P09104 434 aaPredicted RBP11.63□□□□□ -0.55
CDH5-208ENST00000614547 CDH1P12830 882 aa11.63□□□□□ -0.55
CDH5-208ENST00000614547 TCF3P15923 654 aa11.63□□□□□ -0.55
CDH5-208ENST00000614547 C18orf21Q32NC0 220 aaPredicted RBP11.63□□□□□ -0.55
CDH5-208ENST00000614547 NECAB2Q7Z6G3 386 aa11.63□□□□□ -0.55
CDH5-208ENST00000614547 OMA1Q96E52 524 aa11.63□□□□□ -0.55
CDH5-208ENST00000614547 APOL4Q9BPW4 351 aa11.63□□□□□ -0.55
CDH5-208ENST00000614547 TP63Q9H3D4 680 aaPredicted RBP11.63□□□□□ -0.55
CDH5-208ENST00000614547 OLA1Q9NTK5 396 aaKnown RBP11.63□□□□□ -0.55
CDH5-208ENST00000614547 UTS2RQ9UKP6 389 aa11.63□□□□□ -0.55
CDH5-208ENST00000614547 CXCR6O00574 342 aa11.63□□□□□ -0.55
CDH5-208ENST00000614547 MATN3O15232 486 aa11.63□□□□□ -0.55
CDH5-208ENST00000614547 LCKP06239 509 aa11.63□□□□□ -0.55
CDH5-208ENST00000614547 PIM1P11309 404 aaPredicted RBP11.63□□□□□ -0.55
CDH5-208ENST00000614547 FAM189BP81408 668 aa11.63□□□□□ -0.55
CDH5-208ENST00000614547 MXD1Q05195 221 aa11.63□□□□□ -0.55
CDH5-208ENST00000614547 MTA1Q13330 715 aa11.63□□□□□ -0.55
CDH5-208ENST00000614547 LCN8Q6JVE9 175 aa11.63□□□□□ -0.55
CDH5-208ENST00000614547 C14orf80Q86SX3 495 aa11.63□□□□□ -0.55
CDH5-208ENST00000614547 HID1Q8IV36 788 aa11.63□□□□□ -0.55
CDH5-208ENST00000614547 CENPIQ92674 756 aaPredicted RBP11.63□□□□□ -0.55
CDH5-208ENST00000614547 SMARCD1Q96GM5 515 aa11.63□□□□□ -0.55
CDH5-208ENST00000614547 SMIM14Q96QK8 99 aa11.63□□□□□ -0.55
CDH5-208ENST00000614547 SMOQ99835 787 aa11.63□□□□□ -0.55
CDH5-208ENST00000614547 RBM4BQ9BQ04 359 aaKnown RBP11.63□□□□□ -0.55
CDH5-208ENST00000614547 RBM4Q9BWF3 364 aaKnown RBP11.63□□□□□ -0.55
CDH5-208ENST00000614547 GPR63Q9BZJ6 419 aa11.63□□□□□ -0.55
CDH5-208ENST00000614547 KRT84Q9NSB2 600 aa11.63□□□□□ -0.55
CDH5-208ENST00000614547 EVPLQ92817 2033 aa11.63□□□□□ -0.55
CDH5-208ENST00000614547 SLC12A8A0AV02 714 aa11.63□□□□□ -0.55
CDH5-208ENST00000614547 ZBTB42B2RXF5 422 aa11.63□□□□□ -0.55
CDH5-208ENST00000614547 LOC110117498-PIK3R3F6TDL0 507 aa11.63□□□□□ -0.55
CDH5-208ENST00000614547 CBX4O00257 560 aa11.63□□□□□ -0.55
CDH5-208ENST00000614547 RAMP2O60895 175 aa11.63□□□□□ -0.55
CDH5-208ENST00000614547 IRF1P10914 325 aa11.63□□□□□ -0.55
CDH5-208ENST00000614547 PIGAP37287 484 aa11.63□□□□□ -0.55
CDH5-208ENST00000614547 HTR6P50406 440 aa11.63□□□□□ -0.55
CDH5-208ENST00000614547 IL2P60568 153 aa11.63□□□□□ -0.55
CDH5-208ENST00000614547 ZFP69Q49AA0 526 aa11.63□□□□□ -0.55
CDH5-208ENST00000614547 UGT3A1Q6NUS8 523 aa11.63□□□□□ -0.55
CDH5-208ENST00000614547 DCLRE1AQ6PJP8 1040 aa11.63□□□□□ -0.55
CDH5-208ENST00000614547 BLOC1S3Q6QNY0 202 aa11.63□□□□□ -0.55
CDH5-208ENST00000614547 SETD9Q8NE22 299 aa11.63□□□□□ -0.55
CDH5-208ENST00000614547 OR52B6Q8NGF0 335 aa11.63□□□□□ -0.55
CDH5-208ENST00000614547 OR13F1Q8NGS4 319 aa11.63□□□□□ -0.55
CDH5-208ENST00000614547 SH3RF2Q8TEC5 729 aa11.63□□□□□ -0.55
CDH5-208ENST00000614547 FCRL5Q96RD9 977 aa11.63□□□□□ -0.55
CDH5-208ENST00000614547 PRDM16Q9HAZ2 1276 aa11.63□□□□□ -0.55
CDH5-208ENST00000614547 PCDHGA3Q9Y5H0 932 aa11.63□□□□□ -0.55
CDH5-208ENST00000614547 A0A1B0GTL3 188 aa11.62□□□□□ -0.55
CDH5-208ENST00000614547 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.62□□□□□ -0.55
CDH5-208ENST00000614547 SLC1A7O00341 560 aa11.62□□□□□ -0.55
CDH5-208ENST00000614547 TBX18O95935 607 aa11.62□□□□□ -0.55
CDH5-208ENST00000614547 THP07101 528 aa11.62□□□□□ -0.55
CDH5-208ENST00000614547 UMPSP11172 480 aa11.62□□□□□ -0.55
CDH5-208ENST00000614547 BMP4P12644 408 aa11.62□□□□□ -0.55
CDH5-208ENST00000614547 AQP6Q13520 282 aa11.62□□□□□ -0.55
CDH5-208ENST00000614547 INAVAQ3KP66 663 aa11.62□□□□□ -0.55
CDH5-208ENST00000614547 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.62□□□□□ -0.55
CDH5-208ENST00000614547 EFL1Q7Z2Z2 1120 aaKnown RBP11.62□□□□□ -0.55
CDH5-208ENST00000614547 CILP2Q8IUL8 1156 aa11.62□□□□□ -0.55
CDH5-208ENST00000614547 CRYBG2Q8N1P7 616 aa11.62□□□□□ -0.55
CDH5-208ENST00000614547 THEM5Q8N1Q8 247 aa11.62□□□□□ -0.55
CDH5-208ENST00000614547 TTC30BQ8N4P2 665 aa11.62□□□□□ -0.55
CDH5-208ENST00000614547 SVOPQ8N4V2 548 aa11.62□□□□□ -0.55
CDH5-208ENST00000614547 AMER2Q8N7J2 671 aa11.62□□□□□ -0.55
CDH5-208ENST00000614547 LEMD2Q8NC56 503 aa11.62□□□□□ -0.55
CDH5-208ENST00000614547 TBC1D14Q9P2M4 693 aa11.62□□□□□ -0.55
CDH5-208ENST00000614547 MEIS3P2A8K0S8 358 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms