RNA–Protein interactions for RNA: ENST00000612946.4

TTC28-208, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TTC28, Length 11,274 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-208ENST00000612946 SLC35C2Q9NQQ7 365 aa8.68□□□□□ -1.02
TTC28-208ENST00000612946 RNF146Q9NTX7 359 aa8.68□□□□□ -1.02
TTC28-208ENST00000612946 ANKMY1Q9P2S6 941 aa8.68□□□□□ -1.02
TTC28-208ENST00000612946 FGF1P05230 155 aa8.68□□□□□ -1.02
TTC28-208ENST00000612946 FCER2P06734 321 aa8.68□□□□□ -1.02
TTC28-208ENST00000612946 MYF6P23409 242 aa8.68□□□□□ -1.02
TTC28-208ENST00000612946 PRKD1Q15139 912 aaPredicted RBP8.68□□□□□ -1.02
TTC28-208ENST00000612946 CREB3L2Q70SY1 520 aa8.68□□□□□ -1.02
TTC28-208ENST00000612946 RPLP0P6Q8NHW5 317 aa8.68□□□□□ -1.02
TTC28-208ENST00000612946 OR51E2Q9H255 320 aa8.68□□□□□ -1.02
TTC28-208ENST00000612946 SLC17A7Q9P2U7 560 aa8.68□□□□□ -1.02
TTC28-208ENST00000612946 ATRNO75882 1429 aa8.68□□□□□ -1.02
TTC28-208ENST00000612946 KAT7O95251 611 aa8.68□□□□□ -1.02
TTC28-208ENST00000612946 HLCSP50747 726 aa8.68□□□□□ -1.02
TTC28-208ENST00000612946 ATP4BP51164 291 aa8.68□□□□□ -1.02
TTC28-208ENST00000612946 ZNHIT3Q15649 155 aaPredicted RBP8.68□□□□□ -1.02
TTC28-208ENST00000612946 LPGAT1Q92604 370 aa8.68□□□□□ -1.02
TTC28-208ENST00000612946 SPATA33Q96N06 139 aa8.68□□□□□ -1.02
TTC28-208ENST00000612946 LMAN2LQ9H0V9 348 aa8.68□□□□□ -1.02
TTC28-208ENST00000612946 BRD9Q9H8M2 597 aa8.68□□□□□ -1.02
TTC28-208ENST00000612946 CALML5Q9NZT1 146 aa8.68□□□□□ -1.02
TTC28-208ENST00000612946 CYTH4Q9UIA0 394 aa8.68□□□□□ -1.02
TTC28-208ENST00000612946 ALKQ9UM73 1620 aa8.68□□□□□ -1.02
TTC28-208ENST00000612946 APOC3P02656 99 aa8.68□□□□□ -1.02
TTC28-208ENST00000612946 CTPS1P17812 591 aa8.68□□□□□ -1.02
TTC28-208ENST00000612946 CERS1P27544 350 aa8.68□□□□□ -1.02
TTC28-208ENST00000612946 AIMP2Q13155 320 aaKnown RBP8.68□□□□□ -1.02
TTC28-208ENST00000612946 ANKRD22Q5VYY1 191 aa8.68□□□□□ -1.02
TTC28-208ENST00000612946 TATDN1Q6P1N9 297 aa8.68□□□□□ -1.02
TTC28-208ENST00000612946 GADL1Q6ZQY3 521 aa8.68□□□□□ -1.02
TTC28-208ENST00000612946 CNPPD1Q9BV87 410 aa8.68□□□□□ -1.02
TTC28-208ENST00000612946 SLC6A16Q9GZN6 736 aa8.68□□□□□ -1.02
TTC28-208ENST00000612946 NUDT4Q9NZJ9 180 aa8.68□□□□□ -1.02
TTC28-208ENST00000612946 MYPNQ86TC9 1320 aa8.68□□□□□ -1.02
TTC28-208ENST00000612946 CCR1P32246 355 aa8.68□□□□□ -1.02
TTC28-208ENST00000612946 SLC1A2P43004 574 aa8.68□□□□□ -1.02
TTC28-208ENST00000612946 DCST1Q5T197 706 aa8.68□□□□□ -1.02
TTC28-208ENST00000612946 KIAA1614Q5VZ46 1190 aa8.68□□□□□ -1.02
TTC28-208ENST00000612946 SAPCD2Q86UD0 394 aa8.68□□□□□ -1.02
TTC28-208ENST00000612946 SPPL2CQ8IUH8 684 aa8.68□□□□□ -1.02
TTC28-208ENST00000612946 SPOCK2Q92563 424 aa8.68□□□□□ -1.02
TTC28-208ENST00000612946 FBXO44Q9H4M3 255 aa8.68□□□□□ -1.02
TTC28-208ENST00000612946 C19orf12Q9NSK7 152 aa8.68□□□□□ -1.02
TTC28-208ENST00000612946 PAK1IP1Q9NWT1 392 aaPredicted RBP8.68□□□□□ -1.02
TTC28-208ENST00000612946 EFCAB7A8K855 629 aa8.68□□□□□ -1.02
TTC28-208ENST00000612946 INMT-MINDY4F8WBC2 141 aa8.68□□□□□ -1.02
TTC28-208ENST00000612946 IFNA2P01563 188 aa8.68□□□□□ -1.02
TTC28-208ENST00000612946 JCHAINP01591 159 aa8.68□□□□□ -1.02
TTC28-208ENST00000612946 ZNF182P17025 639 aaPredicted RBP8.68□□□□□ -1.02
TTC28-208ENST00000612946 ETV6P41212 452 aa8.68□□□□□ -1.02
TTC28-208ENST00000612946 GNPDA1P46926 289 aa8.68□□□□□ -1.02
TTC28-208ENST00000612946 EIPR1Q53HC9 387 aa8.68□□□□□ -1.02
TTC28-208ENST00000612946 ZDHHC20Q5W0Z9 365 aa8.68□□□□□ -1.02
TTC28-208ENST00000612946 DCPSQ96C86 337 aaKnown RBP8.68□□□□□ -1.02
TTC28-208ENST00000612946 MYO19Q96H55 970 aa8.68□□□□□ -1.02
TTC28-208ENST00000612946 LPIN3Q9BQK8 851 aa8.68□□□□□ -1.02
TTC28-208ENST00000612946 MXRA8Q9BRK3 442 aa8.68□□□□□ -1.02
TTC28-208ENST00000612946 NT5DC2Q9H857 520 aa8.68□□□□□ -1.02
TTC28-208ENST00000612946 COL20A1Q9P218 1284 aa8.68□□□□□ -1.02
TTC28-208ENST00000612946 PPM1HQ9ULR3 514 aa8.68□□□□□ -1.02
TTC28-208ENST00000612946 GH2P01242 217 aa8.68□□□□□ -1.02
TTC28-208ENST00000612946 PRPS2P11908 318 aa8.68□□□□□ -1.02
TTC28-208ENST00000612946 SLC6A3Q01959 620 aa8.68□□□□□ -1.02
TTC28-208ENST00000612946 RAB39AQ14964 217 aa8.68□□□□□ -1.02
TTC28-208ENST00000612946 ZC3H12AQ5D1E8 599 aaKnown RBP8.68□□□□□ -1.02
TTC28-208ENST00000612946 CLP1Q92989 425 aaKnown RBP8.68□□□□□ -1.02
TTC28-208ENST00000612946 H7C1Q1 480 aa8.67□□□□□ -1.02
TTC28-208ENST00000612946 ZMPSTE24O75844 475 aa8.67□□□□□ -1.02
TTC28-208ENST00000612946 IDH3AP50213 366 aa8.67□□□□□ -1.02
TTC28-208ENST00000612946 HAPLN3Q96S86 360 aa8.67□□□□□ -1.02
TTC28-208ENST00000612946 MTG2Q9H4K7 406 aa8.67□□□□□ -1.02
TTC28-208ENST00000612946 SNTG1Q9NSN8 517 aa8.67□□□□□ -1.02
TTC28-208ENST00000612946 BOLA2-SMG1P6H3BVE0 249 aa8.67□□□□□ -1.02
TTC28-208ENST00000612946 CREBL2O60519 120 aaPredicted RBP8.67□□□□□ -1.02
TTC28-208ENST00000612946 KERAO60938 352 aa8.67□□□□□ -1.02
TTC28-208ENST00000612946 THEGLP0DJG4 465 aa8.67□□□□□ -1.02
TTC28-208ENST00000612946 GRK5P34947 590 aa8.67□□□□□ -1.02
TTC28-208ENST00000612946 RPS5P46782 204 aaKnown RBP8.67□□□□□ -1.02
TTC28-208ENST00000612946 CEBPGP53567 150 aa8.67□□□□□ -1.02
TTC28-208ENST00000612946 MKRN4PQ13434 485 aaPredicted RBP8.67□□□□□ -1.02
TTC28-208ENST00000612946 OGFRL1Q5TC84 451 aaPredicted RBP8.67□□□□□ -1.02
TTC28-208ENST00000612946 CCBE1Q6UXH8 406 aaPredicted RBP8.67□□□□□ -1.02
TTC28-208ENST00000612946 SLC26A9Q7LBE3 791 aa8.67□□□□□ -1.02
TTC28-208ENST00000612946 ATG9AQ7Z3C6 839 aa8.67□□□□□ -1.02
TTC28-208ENST00000612946 DEDD2Q8WXF8 326 aa8.67□□□□□ -1.02
TTC28-208ENST00000612946 LAMA4Q16363 1823 aa8.67□□□□□ -1.02
TTC28-208ENST00000612946 ERCC6L2Q5T890 1561 aa8.67□□□□□ -1.02
TTC28-208ENST00000612946 FXYD6-FXYD2A0A087WZ82 144 aa8.67□□□□□ -1.02
TTC28-208ENST00000612946 ZBTB14O43829 449 aa8.67□□□□□ -1.02
TTC28-208ENST00000612946 HLA-EP13747 358 aa8.67□□□□□ -1.02
TTC28-208ENST00000612946 MAP2K3P46734 347 aa8.67□□□□□ -1.02
TTC28-208ENST00000612946 DGKQP52824 942 aa8.67□□□□□ -1.02
TTC28-208ENST00000612946 COQ5Q5HYK3 327 aa8.67□□□□□ -1.02
TTC28-208ENST00000612946 FXYD6Q9H0Q3 95 aa8.67□□□□□ -1.02
TTC28-208ENST00000612946 CHRNA1P02708 482 aa8.67□□□□□ -1.02
TTC28-208ENST00000612946 TACSTD2P09758 323 aa8.67□□□□□ -1.02
TTC28-208ENST00000612946 DNASE1P24855 282 aa8.67□□□□□ -1.02
TTC28-208ENST00000612946 TLX1P31314 330 aaPredicted RBP8.67□□□□□ -1.02
TTC28-208ENST00000612946 CDH5P33151 784 aaPredicted RBP8.67□□□□□ -1.02
TTC28-208ENST00000612946 NUDT1P36639 197 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms