RNA–Protein interactions for RNA: ENST00000612467.1

PCDHGA3-202, Transcript of protocadherin gamma subfamily A, 3, humanhuman

TSL 2

Gene PCDHGA3, Length 2,712 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-202ENST00000612467 HHIPL1Q96JK4 782 aa13.87□□□□□ -0.19
PCDHGA3-202ENST00000612467 ZNF597Q96LX8 424 aa13.87□□□□□ -0.19
PCDHGA3-202ENST00000612467 NANOGQ9H9S0 305 aa13.87□□□□□ -0.19
PCDHGA3-202ENST00000612467 SLC4A7Q9Y6M7 1214 aa13.87□□□□□ -0.19
PCDHGA3-202ENST00000612467 NUP214P35658 2090 aaPredicted RBP13.87□□□□□ -0.19
PCDHGA3-202ENST00000612467 BBIP1A8MTZ0 92 aa13.87□□□□□ -0.19
PCDHGA3-202ENST00000612467 DLGAP1O14490 977 aa13.87□□□□□ -0.19
PCDHGA3-202ENST00000612467 VILLO15195 856 aa13.87□□□□□ -0.19
PCDHGA3-202ENST00000612467 MLYCDO95822 493 aa13.87□□□□□ -0.19
PCDHGA3-202ENST00000612467 CHEK2O96017 543 aa13.87□□□□□ -0.19
PCDHGA3-202ENST00000612467 PSMA3P25788 255 aa13.87□□□□□ -0.19
PCDHGA3-202ENST00000612467 ITGB8P26012 769 aa13.87□□□□□ -0.19
PCDHGA3-202ENST00000612467 BCL2L1Q07817 233 aa13.87□□□□□ -0.19
PCDHGA3-202ENST00000612467 NFATC2Q13469 925 aa13.87□□□□□ -0.19
PCDHGA3-202ENST00000612467 ATP6AP1LQ52LC2 224 aa13.87□□□□□ -0.19
PCDHGA3-202ENST00000612467 ERMP1Q7Z2K6 904 aa13.87□□□□□ -0.19
PCDHGA3-202ENST00000612467 GPR26Q8NDV2 337 aa13.87□□□□□ -0.19
PCDHGA3-202ENST00000612467 RIN3Q8TB24 985 aa13.87□□□□□ -0.19
PCDHGA3-202ENST00000612467 HOPXQ9BPY8 73 aaPredicted RBP13.87□□□□□ -0.19
PCDHGA3-202ENST00000612467 RNF208Q9H0X6 261 aa13.87□□□□□ -0.19
PCDHGA3-202ENST00000612467 OAZ3Q9UMX2 235 aa13.87□□□□□ -0.19
PCDHGA3-202ENST00000612467 CCL26Q9Y258 94 aa13.87□□□□□ -0.19
PCDHGA3-202ENST00000612467 H7C0S8 307 aa13.86□□□□□ -0.19
PCDHGA3-202ENST00000612467 MTX2O75431 263 aa13.86□□□□□ -0.19
PCDHGA3-202ENST00000612467 TRBC1P01850 177 aa13.86□□□□□ -0.19
PCDHGA3-202ENST00000612467 CXCL10P02778 98 aa13.86□□□□□ -0.19
PCDHGA3-202ENST00000612467 HSPA8P11142 646 aaKnown RBP13.86□□□□□ -0.19
PCDHGA3-202ENST00000612467 CLCN4P51793 760 aa13.86□□□□□ -0.19
PCDHGA3-202ENST00000612467 ERVK-8P63133 956 aa13.86□□□□□ -0.19
PCDHGA3-202ENST00000612467 RPL38P63173 70 aaKnown RBP13.86□□□□□ -0.19
PCDHGA3-202ENST00000612467 TRAF3Q13114 568 aa13.86□□□□□ -0.19
PCDHGA3-202ENST00000612467 OGFOD2Q6N063 350 aa13.86□□□□□ -0.19
PCDHGA3-202ENST00000612467 SLC39A11Q8N1S5 342 aa13.86□□□□□ -0.19
PCDHGA3-202ENST00000612467 VOPP1Q96AW1 172 aa13.86□□□□□ -0.19
PCDHGA3-202ENST00000612467 KCTD14Q9BQ13 255 aaPredicted RBP13.86□□□□□ -0.19
PCDHGA3-202ENST00000612467 C1QTNF3Q9BXJ4 246 aa13.86□□□□□ -0.19
PCDHGA3-202ENST00000612467 RPF2Q9H7B2 306 aaKnown RBP13.86□□□□□ -0.19
PCDHGA3-202ENST00000612467 CCM2LQ9NUG4 571 aaPredicted RBP13.86□□□□□ -0.19
PCDHGA3-202ENST00000612467 DNMT3BQ9UBC3 853 aaKnown RBP13.86□□□□□ -0.19
PCDHGA3-202ENST00000612467 CIDEBQ9UHD4 219 aa13.86□□□□□ -0.19
PCDHGA3-202ENST00000612467 XIRP2A4UGR9 3374 aa13.86□□□□□ -0.19
PCDHGA3-202ENST00000612467 AP1G1O43747 822 aa13.86□□□□□ -0.19
PCDHGA3-202ENST00000612467 ACRP10323 421 aa13.86□□□□□ -0.19
PCDHGA3-202ENST00000612467 AP5B1Q2VPB7 878 aa13.86□□□□□ -0.19
PCDHGA3-202ENST00000612467 INO80DQ53TQ3 878 aaPredicted RBP13.86□□□□□ -0.19
PCDHGA3-202ENST00000612467 CWF19L1Q69YN2 538 aaKnown RBP13.86□□□□□ -0.19
PCDHGA3-202ENST00000612467 TXNDC11Q6PKC3 985 aa13.86□□□□□ -0.19
PCDHGA3-202ENST00000612467 Q6ZNB5 142 aa13.86□□□□□ -0.19
PCDHGA3-202ENST00000612467 SLC22A15Q8IZD6 547 aa13.86□□□□□ -0.19
PCDHGA3-202ENST00000612467 TMEM199Q8N511 208 aa13.86□□□□□ -0.19
PCDHGA3-202ENST00000612467 FAM47BQ8NA70 645 aa13.86□□□□□ -0.19
PCDHGA3-202ENST00000612467 TOP1MTQ969P6 601 aa13.86□□□□□ -0.19
PCDHGA3-202ENST00000612467 ZNF382Q96SR6 550 aa13.86□□□□□ -0.19
PCDHGA3-202ENST00000612467 MRPL40Q9NQ50 206 aaKnown RBP13.86□□□□□ -0.19
PCDHGA3-202ENST00000612467 LATS2Q9NRM7 1088 aa13.86□□□□□ -0.19
PCDHGA3-202ENST00000612467 CRLS1Q9UJA2 301 aa13.86□□□□□ -0.19
PCDHGA3-202ENST00000612467 ATP11BQ9Y2G3 1177 aa13.86□□□□□ -0.19
PCDHGA3-202ENST00000612467 STAMBPO95630 424 aa13.85□□□□□ -0.19
PCDHGA3-202ENST00000612467 URODP06132 367 aa13.85□□□□□ -0.19
PCDHGA3-202ENST00000612467 PCNAP12004 261 aa13.85□□□□□ -0.19
PCDHGA3-202ENST00000612467 HRH2P25021 359 aa13.85□□□□□ -0.19
PCDHGA3-202ENST00000612467 EPHB3P54753 998 aa13.85□□□□□ -0.19
PCDHGA3-202ENST00000612467 CDKN3Q16667 212 aa13.85□□□□□ -0.19
PCDHGA3-202ENST00000612467 TMEM126BQ8IUX1 230 aa13.85□□□□□ -0.19
PCDHGA3-202ENST00000612467 APLFQ8IW19 511 aaPredicted RBP13.85□□□□□ -0.19
PCDHGA3-202ENST00000612467 OFCC1Q8IZS5 231 aa13.85□□□□□ -0.19
PCDHGA3-202ENST00000612467 KRTCAP2Q8N6L1 136 aa13.85□□□□□ -0.19
PCDHGA3-202ENST00000612467 DCAF4L2Q8NA75 395 aa13.85□□□□□ -0.19
PCDHGA3-202ENST00000612467 ZFP28Q8NHY6 868 aa13.85□□□□□ -0.19
PCDHGA3-202ENST00000612467 TRMT2BQ96GJ1 504 aaKnown RBP13.85□□□□□ -0.19
PCDHGA3-202ENST00000612467 FBXL20Q96IG2 436 aa13.85□□□□□ -0.19
PCDHGA3-202ENST00000612467 ZNF558Q96NG5 402 aa13.85□□□□□ -0.19
PCDHGA3-202ENST00000612467 UHRF1Q96T88 793 aaPredicted RBP13.85□□□□□ -0.19
PCDHGA3-202ENST00000612467 MAGEE1Q9HCI5 957 aa13.85□□□□□ -0.19
PCDHGA3-202ENST00000612467 SMOXQ9NWM0 555 aa13.85□□□□□ -0.19
PCDHGA3-202ENST00000612467 GID8Q9NWU2 228 aa13.85□□□□□ -0.19
PCDHGA3-202ENST00000612467 HCFC1R1Q9NWW0 138 aa13.85□□□□□ -0.19
PCDHGA3-202ENST00000612467 MAGED1Q9Y5V3 778 aaPredicted RBP13.85□□□□□ -0.19
PCDHGA3-202ENST00000612467 OBSL1O75147 1896 aa13.85□□□□□ -0.19
PCDHGA3-202ENST00000612467 GLYATL1P3A0A0U1RQE8 302 aa13.85□□□□□ -0.19
PCDHGA3-202ENST00000612467 H3BSA7 217 aa13.85□□□□□ -0.19
PCDHGA3-202ENST00000612467 LSM1O15116 133 aaKnown RBP13.85□□□□□ -0.19
PCDHGA3-202ENST00000612467 TNFAIP8O95379 198 aa13.85□□□□□ -0.19
PCDHGA3-202ENST00000612467 HSD17B1P14061 328 aa13.85□□□□□ -0.19
PCDHGA3-202ENST00000612467 SLC2A4P14672 509 aa13.85□□□□□ -0.19
PCDHGA3-202ENST00000612467 MTA1Q13330 715 aa13.85□□□□□ -0.19
PCDHGA3-202ENST00000612467 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.85□□□□□ -0.19
PCDHGA3-202ENST00000612467 AARS2Q5JTZ9 985 aaKnown RBP13.85□□□□□ -0.19
PCDHGA3-202ENST00000612467 CYP20A1Q6UW02 462 aa13.85□□□□□ -0.19
PCDHGA3-202ENST00000612467 SPATA19Q7Z5L4 167 aa13.85□□□□□ -0.19
PCDHGA3-202ENST00000612467 MILR1Q7Z6M3 343 aa13.85□□□□□ -0.19
PCDHGA3-202ENST00000612467 RNF175Q8N4F7 328 aa13.85□□□□□ -0.19
PCDHGA3-202ENST00000612467 SLC22A17Q8WUG5 538 aa13.85□□□□□ -0.19
PCDHGA3-202ENST00000612467 LIN28AQ9H9Z2 209 aaKnown RBP13.85□□□□□ -0.19
PCDHGA3-202ENST00000612467 ABCB8Q9NUT2 735 aa13.85□□□□□ -0.19
PCDHGA3-202ENST00000612467 KLQ9UEF7 1012 aa13.85□□□□□ -0.19
PCDHGA3-202ENST00000612467 STOML2Q9UJZ1 356 aa13.85□□□□□ -0.19
PCDHGA3-202ENST00000612467 VPS9D1Q9Y2B5 631 aa13.85□□□□□ -0.19
PCDHGA3-202ENST00000612467 HEMK1Q9Y5R4 338 aaPredicted RBP13.85□□□□□ -0.19
PCDHGA3-202ENST00000612467 KIAA0100Q14667 2235 aaKnown RBP13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms