RNA–Protein interactions for RNA: ENST00000612050.4

CBWD3-208, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,440 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-208ENST00000612050 TSTD2Q5T7W7 516 aa12.09□□□□□ -0.47
CBWD3-208ENST00000612050 METRNLQ641Q3 311 aa12.09□□□□□ -0.47
CBWD3-208ENST00000612050 C11orf96Q7Z7L8 435 aa12.09□□□□□ -0.47
CBWD3-208ENST00000612050 CFAP206Q8IYR0 622 aa12.09□□□□□ -0.47
CBWD3-208ENST00000612050 ZSCAN1Q8NBB4 408 aa12.09□□□□□ -0.47
CBWD3-208ENST00000612050 ZFPM2Q8WW38 1151 aa12.09□□□□□ -0.47
CBWD3-208ENST00000612050 USP7Q93009 1102 aa12.09□□□□□ -0.47
CBWD3-208ENST00000612050 MAGOHBQ96A72 148 aaKnown RBP12.09□□□□□ -0.47
CBWD3-208ENST00000612050 PRR11Q96HE9 360 aaPredicted RBP12.09□□□□□ -0.47
CBWD3-208ENST00000612050 C12orf66Q96MD2 445 aa12.09□□□□□ -0.47
CBWD3-208ENST00000612050 TEFMQ96QE5 360 aaKnown RBP12.09□□□□□ -0.47
CBWD3-208ENST00000612050 ZPBPQ9BS86 351 aa12.09□□□□□ -0.47
CBWD3-208ENST00000612050 TBC1D10AQ9BXI6 508 aa12.09□□□□□ -0.47
CBWD3-208ENST00000612050 SLC40A1Q9NP59 571 aa12.09□□□□□ -0.47
CBWD3-208ENST00000612050 SLC39A1Q9NY26 324 aa12.09□□□□□ -0.47
CBWD3-208ENST00000612050 ZNF624Q9P2J8 865 aaPredicted RBP12.09□□□□□ -0.47
CBWD3-208ENST00000612050 KLHL3Q9UH77 587 aa12.09□□□□□ -0.47
CBWD3-208ENST00000612050 AKAP13Q12802 2813 aa12.09□□□□□ -0.47
CBWD3-208ENST00000612050 CACNA1BQ00975 2339 aa12.09□□□□□ -0.47
CBWD3-208ENST00000612050 CCDC78A2IDD5 438 aa12.08□□□□□ -0.48
CBWD3-208ENST00000612050 MROH6A6NGR9 719 aa12.08□□□□□ -0.48
CBWD3-208ENST00000612050 OR52A4PA6NMU1 304 aa12.08□□□□□ -0.48
CBWD3-208ENST00000612050 EFCAB7A8K855 629 aa12.08□□□□□ -0.48
CBWD3-208ENST00000612050 STMND1H3BQB6 276 aa12.08□□□□□ -0.48
CBWD3-208ENST00000612050 CCL22O00626 93 aa12.08□□□□□ -0.48
CBWD3-208ENST00000612050 TOX3O15405 576 aaPredicted RBP12.08□□□□□ -0.48
CBWD3-208ENST00000612050 POLBP06746 335 aa12.08□□□□□ -0.48
CBWD3-208ENST00000612050 MTHFD1P11586 935 aaKnown RBP12.08□□□□□ -0.48
CBWD3-208ENST00000612050 HOXB3P14651 431 aaPredicted RBP12.08□□□□□ -0.48
CBWD3-208ENST00000612050 ETS1P14921 441 aa12.08□□□□□ -0.48
CBWD3-208ENST00000612050 TYRP1P17643 537 aa12.08□□□□□ -0.48
CBWD3-208ENST00000612050 TCP1P17987 556 aaKnown RBP12.08□□□□□ -0.48
CBWD3-208ENST00000612050 PAMP19021 973 aa12.08□□□□□ -0.48
CBWD3-208ENST00000612050 ITIH1P19827 911 aa12.08□□□□□ -0.48
CBWD3-208ENST00000612050 MPSTP25325 297 aa12.08□□□□□ -0.48
CBWD3-208ENST00000612050 CSF2RBP32927 897 aa12.08□□□□□ -0.48
CBWD3-208ENST00000612050 CXADRP78310 365 aa12.08□□□□□ -0.48
CBWD3-208ENST00000612050 PLOD1Q02809 727 aaPredicted RBP12.08□□□□□ -0.48
CBWD3-208ENST00000612050 RPA4Q13156 261 aa12.08□□□□□ -0.48
CBWD3-208ENST00000612050 MSLNQ13421 630 aaPredicted RBP12.08□□□□□ -0.48
CBWD3-208ENST00000612050 GPR18Q14330 331 aa12.08□□□□□ -0.48
CBWD3-208ENST00000612050 C16orf72Q14CZ0 275 aa12.08□□□□□ -0.48
CBWD3-208ENST00000612050 RPE65Q16518 533 aa12.08□□□□□ -0.48
CBWD3-208ENST00000612050 CCDC38Q502W7 563 aa12.08□□□□□ -0.48
CBWD3-208ENST00000612050 CEACAM20Q6UY09 585 aa12.08□□□□□ -0.48
CBWD3-208ENST00000612050 CCDC81Q6ZN84 652 aa12.08□□□□□ -0.48
CBWD3-208ENST00000612050 GPR155Q7Z3F1 870 aa12.08□□□□□ -0.48
CBWD3-208ENST00000612050 PDZD3Q86UT5 571 aa12.08□□□□□ -0.48
CBWD3-208ENST00000612050 OOSP2Q86WS3 158 aa12.08□□□□□ -0.48
CBWD3-208ENST00000612050 SLC35F6Q8N357 371 aa12.08□□□□□ -0.48
CBWD3-208ENST00000612050 OTUD6BQ8N6M0 293 aa12.08□□□□□ -0.48
CBWD3-208ENST00000612050 GSDMBQ8TAX9 411 aa12.08□□□□□ -0.48
CBWD3-208ENST00000612050 FCRL3Q96P31 734 aaPredicted RBP12.08□□□□□ -0.48
CBWD3-208ENST00000612050 DDA1Q9BW61 102 aa12.08□□□□□ -0.48
CBWD3-208ENST00000612050 WWP1Q9H0M0 922 aa12.08□□□□□ -0.48
CBWD3-208ENST00000612050 CASS4Q9NQ75 786 aa12.08□□□□□ -0.48
CBWD3-208ENST00000612050 TRMT1Q9NXH9 659 aaKnown RBP12.08□□□□□ -0.48
CBWD3-208ENST00000612050 SCHIP1Q9P0W5 487 aaPredicted RBP12.08□□□□□ -0.48
CBWD3-208ENST00000612050 SAMD15Q9P1V8 674 aa12.08□□□□□ -0.48
CBWD3-208ENST00000612050 TCAF1Q9Y4C2 921 aa12.08□□□□□ -0.48
CBWD3-208ENST00000612050 ACACAQ13085 2346 aa12.08□□□□□ -0.48
CBWD3-208ENST00000612050 URB1O60287 2271 aaKnown RBP12.07□□□□□ -0.48
CBWD3-208ENST00000612050 TRBV5-4A0A0C4DH59 114 aa12.07□□□□□ -0.48
CBWD3-208ENST00000612050 B4E171 279 aa12.07□□□□□ -0.48
CBWD3-208ENST00000612050 CES2O00748 559 aa12.07□□□□□ -0.48
CBWD3-208ENST00000612050 LIN7AO14910 233 aaPredicted RBP12.07□□□□□ -0.48
CBWD3-208ENST00000612050 CASC3O15234 703 aaKnown RBP12.07□□□□□ -0.48
CBWD3-208ENST00000612050 KRT14P02533 472 aa12.07□□□□□ -0.48
CBWD3-208ENST00000612050 ZSCAN5DPP0CG00 497 aa12.07□□□□□ -0.48
CBWD3-208ENST00000612050 BRAFP15056 766 aa12.07□□□□□ -0.48
CBWD3-208ENST00000612050 TPSB2P20231 275 aa12.07□□□□□ -0.48
CBWD3-208ENST00000612050 ITPKBP27987 946 aa12.07□□□□□ -0.48
CBWD3-208ENST00000612050 TSPAN7P41732 249 aa12.07□□□□□ -0.48
CBWD3-208ENST00000612050 CAPZBP47756 277 aa12.07□□□□□ -0.48
CBWD3-208ENST00000612050 KCNJ1P48048 391 aa12.07□□□□□ -0.48
CBWD3-208ENST00000612050 TTPAP49638 278 aa12.07□□□□□ -0.48
CBWD3-208ENST00000612050 SESN2P58004 480 aaPredicted RBP12.07□□□□□ -0.48
CBWD3-208ENST00000612050 TLE3Q04726 772 aa12.07□□□□□ -0.48
CBWD3-208ENST00000612050 CLCA4Q14CN2 919 aa12.07□□□□□ -0.48
CBWD3-208ENST00000612050 SIX1Q15475 284 aaPredicted RBP12.07□□□□□ -0.48
CBWD3-208ENST00000612050 TPSAB1Q15661 275 aa12.07□□□□□ -0.48
CBWD3-208ENST00000612050 MANEAQ5SRI9 462 aa12.07□□□□□ -0.48
CBWD3-208ENST00000612050 ARMC3Q5W041 872 aa12.07□□□□□ -0.48
CBWD3-208ENST00000612050 IRGCQ6NXR0 463 aa12.07□□□□□ -0.48
CBWD3-208ENST00000612050 CCDC137Q6PK04 289 aaKnown RBP12.07□□□□□ -0.48
CBWD3-208ENST00000612050 ZNF574Q6ZN55 896 aaPredicted RBP12.07□□□□□ -0.48
CBWD3-208ENST00000612050 TMPRSS9Q7Z410 1059 aa12.07□□□□□ -0.48
CBWD3-208ENST00000612050 RASGEF1CQ8N431 466 aa12.07□□□□□ -0.48
CBWD3-208ENST00000612050 OR4L1Q8NH43 312 aa12.07□□□□□ -0.48
CBWD3-208ENST00000612050 ART4Q93070 314 aa12.07□□□□□ -0.48
CBWD3-208ENST00000612050 HDAC10Q969S8 669 aa12.07□□□□□ -0.48
CBWD3-208ENST00000612050 TGM7Q96PF1 710 aa12.07□□□□□ -0.48
CBWD3-208ENST00000612050 CATSPERZQ9NTU4 200 aa12.07□□□□□ -0.48
CBWD3-208ENST00000612050 ACSL6Q9UKU0 697 aa12.07□□□□□ -0.48
CBWD3-208ENST00000612050 TTC7AQ9ULT0 858 aaPredicted RBP12.07□□□□□ -0.48
CBWD3-208ENST00000612050 IGF2RP11717 2491 aa12.07□□□□□ -0.48
CBWD3-208ENST00000612050 MN1Q10571 1320 aaPredicted RBP12.06□□□□□ -0.48
CBWD3-208ENST00000612050 PRAMEF33A0A0G2JMD5 474 aa12.06□□□□□ -0.48
CBWD3-208ENST00000612050 TEX51A0A1B0GUA7 166 aa12.06□□□□□ -0.48
CBWD3-208ENST00000612050 CCDC162PA2VCL2 907 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms