RNA–Protein interactions for RNA: ENST00000611426.4

CBWD3-207, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,381 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-207ENST00000611426 PPFIA2O75334 1257 aa21.41■■□□□ 1.02
CBWD3-207ENST00000611426 ZIC2O95409 532 aaPredicted RBP21.41■■□□□ 1.02
CBWD3-207ENST00000611426 BPIP17213 487 aa21.41■■□□□ 1.02
CBWD3-207ENST00000611426 WT1P19544 449 aaPredicted RBP21.41■■□□□ 1.02
CBWD3-207ENST00000611426 CLCNKAP51800 687 aa21.41■■□□□ 1.02
CBWD3-207ENST00000611426 EPHA4P54764 986 aa21.41■■□□□ 1.02
CBWD3-207ENST00000611426 RAB15P59190 212 aa21.41■■□□□ 1.02
CBWD3-207ENST00000611426 PRKD1Q15139 912 aaPredicted RBP21.41■■□□□ 1.02
CBWD3-207ENST00000611426 CRTC3Q6UUV7 619 aa21.41■■□□□ 1.02
CBWD3-207ENST00000611426 XKR5Q6UX68 686 aa21.41■■□□□ 1.02
CBWD3-207ENST00000611426 C4orf22Q6V702 233 aa21.41■■□□□ 1.02
CBWD3-207ENST00000611426 GSTA5Q7RTV2 222 aa21.41■■□□□ 1.02
CBWD3-207ENST00000611426 IL22RA1Q8N6P7 574 aa21.41■■□□□ 1.02
CBWD3-207ENST00000611426 AVL9Q8NBF6 648 aa21.41■■□□□ 1.02
CBWD3-207ENST00000611426 QKIQ96PU8 341 aaKnown RBP eCLIP21.41■■□□□ 1.02
CBWD3-207ENST00000611426 MTRF1LQ9UGC7 380 aaKnown RBP21.41■■□□□ 1.02
CBWD3-207ENST00000611426 J3QKU1 62 aa21.4■■□□□ 1.02
CBWD3-207ENST00000611426 SMAPO00193 183 aa21.4■■□□□ 1.02
CBWD3-207ENST00000611426 CHUKO15111 745 aa21.4■■□□□ 1.02
CBWD3-207ENST00000611426 KMOO15229 486 aa21.4■■□□□ 1.02
CBWD3-207ENST00000611426 UGT1A3P35503 534 aa21.4■■□□□ 1.02
CBWD3-207ENST00000611426 CYP4F2P78329 520 aa21.4■■□□□ 1.02
CBWD3-207ENST00000611426 INSCQ1MX18 579 aa21.4■■□□□ 1.02
CBWD3-207ENST00000611426 ANKS6Q68DC2 871 aa21.4■■□□□ 1.02
CBWD3-207ENST00000611426 ARHGAP22Q7Z5H3 698 aa21.4■■□□□ 1.02
CBWD3-207ENST00000611426 PLEKHG4BQ96PX9 1271 aa21.4■■□□□ 1.02
CBWD3-207ENST00000611426 TBC1D10AQ9BXI6 508 aa21.4■■□□□ 1.02
CBWD3-207ENST00000611426 EPB41L1Q9H4G0 881 aa21.4■■□□□ 1.02
CBWD3-207ENST00000611426 BPIFA1Q9NP55 256 aa21.4■■□□□ 1.02
CBWD3-207ENST00000611426 SLC23A2Q9UGH3 650 aa21.4■■□□□ 1.02
CBWD3-207ENST00000611426 SPO11Q9Y5K1 396 aa21.4■■□□□ 1.02
CBWD3-207ENST00000611426 DNALI1O14645 258 aaPredicted RBP21.39■■□□□ 1.02
CBWD3-207ENST00000611426 AURKAO14965 403 aa21.39■■□□□ 1.02
CBWD3-207ENST00000611426 PLTPP55058 493 aa21.39■■□□□ 1.02
CBWD3-207ENST00000611426 PLA2G4EQ3MJ16 856 aa21.39■■□□□ 1.02
CBWD3-207ENST00000611426 LRRTM4Q86VH4 590 aa21.39■■□□□ 1.02
CBWD3-207ENST00000611426 BMPERQ8N8U9 685 aa21.39■■□□□ 1.02
CBWD3-207ENST00000611426 GLIS1Q8NBF1 620 aa21.39■■□□□ 1.02
CBWD3-207ENST00000611426 TEFMQ96QE5 360 aaKnown RBP21.39■■□□□ 1.02
CBWD3-207ENST00000611426 PHACTR1Q9C0D0 580 aa21.39■■□□□ 1.02
CBWD3-207ENST00000611426 KLHL3Q9UH77 587 aa21.39■■□□□ 1.02
CBWD3-207ENST00000611426 TENM4Q6N022 2769 aa21.39■■□□□ 1.02
CBWD3-207ENST00000611426 BOD1L1Q8NFC6 3051 aa21.38■■□□□ 1.01
CBWD3-207ENST00000611426 MTSS1O43312 755 aa21.38■■□□□ 1.01
CBWD3-207ENST00000611426 VEGFDO43915 354 aa21.38■■□□□ 1.01
CBWD3-207ENST00000611426 MTX2O75431 263 aa21.38■■□□□ 1.01
CBWD3-207ENST00000611426 CDK14O94921 469 aa21.38■■□□□ 1.01
CBWD3-207ENST00000611426 ZNF7P17097 686 aaPredicted RBP21.38■■□□□ 1.01
CBWD3-207ENST00000611426 CD68P34810 354 aaPredicted RBP21.38■■□□□ 1.01
CBWD3-207ENST00000611426 TNNT3P45378 269 aaPredicted RBP21.38■■□□□ 1.01
CBWD3-207ENST00000611426 UBE2IP63279 158 aaKnown RBP21.38■■□□□ 1.01
CBWD3-207ENST00000611426 MC2RQ01718 297 aa21.38■■□□□ 1.01
CBWD3-207ENST00000611426 WASHC5Q12768 1159 aa21.38■■□□□ 1.01
CBWD3-207ENST00000611426 CBLBQ13191 982 aa21.38■■□□□ 1.01
CBWD3-207ENST00000611426 MORF4L2Q15014 288 aa21.38■■□□□ 1.01
CBWD3-207ENST00000611426 P3H1Q32P28 736 aa21.38■■□□□ 1.01
CBWD3-207ENST00000611426 HIBCHQ6NVY1 386 aaPredicted RBP21.38■■□□□ 1.01
CBWD3-207ENST00000611426 DARS2Q6PI48 645 aaKnown RBP21.38■■□□□ 1.01
CBWD3-207ENST00000611426 ZC3H18Q86VM9 953 aaKnown RBP21.38■■□□□ 1.01
CBWD3-207ENST00000611426 TRIM48Q8IWZ4 208 aa21.38■■□□□ 1.01
CBWD3-207ENST00000611426 CACNA2D3Q8IZS8 1091 aa21.38■■□□□ 1.01
CBWD3-207ENST00000611426 SCHIP1Q9P0W5 487 aaPredicted RBP21.38■■□□□ 1.01
CBWD3-207ENST00000611426 KLHL8Q9P2G9 620 aaPredicted RBP21.38■■□□□ 1.01
CBWD3-207ENST00000611426 DNAJC16Q9Y2G8 782 aa21.38■■□□□ 1.01
CBWD3-207ENST00000611426 LOC285095A0A1B0GVY8 99 aa21.37■■□□□ 1.01
CBWD3-207ENST00000611426 H7C0C1 242 aa21.37■■□□□ 1.01
CBWD3-207ENST00000611426 VIPP01282 170 aa21.37■■□□□ 1.01
CBWD3-207ENST00000611426 XRCC1P18887 633 aaPredicted RBP21.37■■□□□ 1.01
CBWD3-207ENST00000611426 NFKB1P19838 968 aa21.37■■□□□ 1.01
CBWD3-207ENST00000611426 ATP5OP48047 213 aa21.37■■□□□ 1.01
CBWD3-207ENST00000611426 GDF10P55107 478 aa21.37■■□□□ 1.01
CBWD3-207ENST00000611426 WNT3AP56704 352 aa21.37■■□□□ 1.01
CBWD3-207ENST00000611426 SEPT7Q16181 437 aaKnown RBP21.37■■□□□ 1.01
CBWD3-207ENST00000611426 TBR1Q16650 682 aa21.37■■□□□ 1.01
CBWD3-207ENST00000611426 CEP128Q6ZU80 1094 aa21.37■■□□□ 1.01
CBWD3-207ENST00000611426 PCGF5Q86SE9 256 aa21.37■■□□□ 1.01
CBWD3-207ENST00000611426 HOOK3Q86VS8 718 aa21.37■■□□□ 1.01
CBWD3-207ENST00000611426 PLXDC1Q8IUK5 500 aa21.37■■□□□ 1.01
CBWD3-207ENST00000611426 RELL1Q8IUW5 271 aa21.37■■□□□ 1.01
CBWD3-207ENST00000611426 GDAP1Q8TB36 358 aa21.37■■□□□ 1.01
CBWD3-207ENST00000611426 CTRCQ99895 268 aa21.37■■□□□ 1.01
CBWD3-207ENST00000611426 ACBD3Q9H3P7 528 aa21.37■■□□□ 1.01
CBWD3-207ENST00000611426 TRABDQ9H4I3 376 aa21.37■■□□□ 1.01
CBWD3-207ENST00000611426 UCK1Q9HA47 277 aa21.37■■□□□ 1.01
CBWD3-207ENST00000611426 LILRA5A6NI73 299 aa21.36■■□□□ 1.01
CBWD3-207ENST00000611426 PDZK1P1A8MUH7 402 aa21.36■■□□□ 1.01
CBWD3-207ENST00000611426 RAD1O60671 282 aa21.36■■□□□ 1.01
CBWD3-207ENST00000611426 EPOP01588 193 aa21.36■■□□□ 1.01
CBWD3-207ENST00000611426 FAM87AP0C7U9 286 aa21.36■■□□□ 1.01
CBWD3-207ENST00000611426 RPL22P35268 128 aaKnown RBP21.36■■□□□ 1.01
CBWD3-207ENST00000611426 HMGCLP35914 325 aa21.36■■□□□ 1.01
CBWD3-207ENST00000611426 ITGA8P53708 1063 aa21.36■■□□□ 1.01
CBWD3-207ENST00000611426 NFATC3Q12968 1075 aa21.36■■□□□ 1.01
CBWD3-207ENST00000611426 GPS1Q13098 491 aa21.36■■□□□ 1.01
CBWD3-207ENST00000611426 SLMAPQ14BN4 828 aa21.36■■□□□ 1.01
CBWD3-207ENST00000611426 TRIP13Q15645 432 aaPredicted RBP21.36■■□□□ 1.01
CBWD3-207ENST00000611426 ATP13A5Q4VNC0 1218 aa21.36■■□□□ 1.01
CBWD3-207ENST00000611426 RNASEH2BQ5TBB1 312 aaKnown RBP21.36■■□□□ 1.01
CBWD3-207ENST00000611426 IZUMO3Q5VZ72 239 aa21.36■■□□□ 1.01
CBWD3-207ENST00000611426 KDELC1Q6UW63 502 aa21.36■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms