RNA–Protein interactions for RNA: ENST00000610907.1

PABPC1-224, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 1 (best) BASIC

Gene PABPC1, Length 1,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-224ENST00000610907 VCX3AQ9NNX9 186 aa10.29□□□□□ -0.76
PABPC1-224ENST00000610907 EVLQ9UI08 416 aaPredicted RBP10.29□□□□□ -0.76
PABPC1-224ENST00000610907 FNDC3AQ9Y2H6 1198 aaKnown RBP10.29□□□□□ -0.76
PABPC1-224ENST00000610907 SH3BP1Q9Y3L3 701 aa10.29□□□□□ -0.76
PABPC1-224ENST00000610907 CENPFP49454 3210 aa10.28□□□□□ -0.76
PABPC1-224ENST00000610907 C7orf72A4D263 438 aa10.28□□□□□ -0.76
PABPC1-224ENST00000610907 ZNF839A8K0R7 811 aa10.28□□□□□ -0.76
PABPC1-224ENST00000610907 IQCF5A8MTL0 148 aa10.28□□□□□ -0.76
PABPC1-224ENST00000610907 K7ERQ8 282 aa10.28□□□□□ -0.76
PABPC1-224ENST00000610907 SLC28A1O00337 649 aa10.28□□□□□ -0.76
PABPC1-224ENST00000610907 OR7A17O14581 309 aa10.28□□□□□ -0.76
PABPC1-224ENST00000610907 MAP3K13O43283 966 aa10.28□□□□□ -0.76
PABPC1-224ENST00000610907 SMAD6O43541 496 aaKnown RBP10.28□□□□□ -0.76
PABPC1-224ENST00000610907 RGS14O43566 566 aa10.28□□□□□ -0.76
PABPC1-224ENST00000610907 AKAP10O43572 662 aa10.28□□□□□ -0.76
PABPC1-224ENST00000610907 LILRB3O75022 631 aa10.28□□□□□ -0.76
PABPC1-224ENST00000610907 SLC25A14O95258 325 aaPredicted RBP10.28□□□□□ -0.76
PABPC1-224ENST00000610907 BPIP17213 487 aa10.28□□□□□ -0.76
PABPC1-224ENST00000610907 JAK1P23458 1154 aa10.28□□□□□ -0.76
PABPC1-224ENST00000610907 HMOX2P30519 316 aa10.28□□□□□ -0.76
PABPC1-224ENST00000610907 GRIA2P42262 883 aa10.28□□□□□ -0.76
PABPC1-224ENST00000610907 NSG1P42857 185 aa10.28□□□□□ -0.76
PABPC1-224ENST00000610907 GSK3BP49841 420 aa10.28□□□□□ -0.76
PABPC1-224ENST00000610907 ZXDBP98169 803 aa10.28□□□□□ -0.76
PABPC1-224ENST00000610907 MYBPC1Q00872 1141 aa10.28□□□□□ -0.76
PABPC1-224ENST00000610907 TLE2Q04725 743 aa10.28□□□□□ -0.76
PABPC1-224ENST00000610907 PRKCQQ04759 706 aa10.28□□□□□ -0.76
PABPC1-224ENST00000610907 LIPEQ05469 1076 aa10.28□□□□□ -0.76
PABPC1-224ENST00000610907 CAPRIN1Q14444 709 aaKnown RBP10.28□□□□□ -0.76
PABPC1-224ENST00000610907 PTPRRQ15256 657 aa10.28□□□□□ -0.76
PABPC1-224ENST00000610907 EML3Q32P44 896 aa10.28□□□□□ -0.76
PABPC1-224ENST00000610907 PLEKHG6Q3KR16 790 aa10.28□□□□□ -0.76
PABPC1-224ENST00000610907 FBXO48Q5FWF7 155 aa10.28□□□□□ -0.76
PABPC1-224ENST00000610907 MTX3Q5HYI7 312 aa10.28□□□□□ -0.76
PABPC1-224ENST00000610907 NANOGP8Q6NSW7 305 aa10.28□□□□□ -0.76
PABPC1-224ENST00000610907 LETMD1Q6P1Q0 360 aa10.28□□□□□ -0.76
PABPC1-224ENST00000610907 IL27RAQ6UWB1 636 aa10.28□□□□□ -0.76
PABPC1-224ENST00000610907 TPRG1Q6ZUI0 275 aa10.28□□□□□ -0.76
PABPC1-224ENST00000610907 CARM1Q86X55 608 aa10.28□□□□□ -0.76
PABPC1-224ENST00000610907 SPPL2CQ8IUH8 684 aa10.28□□□□□ -0.76
PABPC1-224ENST00000610907 TBC1D21Q8IYX1 336 aa10.28□□□□□ -0.76
PABPC1-224ENST00000610907 ALDH16A1Q8IZ83 802 aa10.28□□□□□ -0.76
PABPC1-224ENST00000610907 NXPE1Q8N323 547 aa10.28□□□□□ -0.76
PABPC1-224ENST00000610907 ZBTB2Q8N680 514 aa10.28□□□□□ -0.76
PABPC1-224ENST00000610907 PAF1Q8N7H5 531 aa10.28□□□□□ -0.76
PABPC1-224ENST00000610907 DNAJC5GQ8N7S2 189 aa10.28□□□□□ -0.76
PABPC1-224ENST00000610907 OR4F6Q8NGB9 312 aa10.28□□□□□ -0.76
PABPC1-224ENST00000610907 OR52B6Q8NGF0 335 aa10.28□□□□□ -0.76
PABPC1-224ENST00000610907 WFDC5Q8TCV5 224 aa10.28□□□□□ -0.76
PABPC1-224ENST00000610907 SCRN2Q96FV2 425 aa10.28□□□□□ -0.76
PABPC1-224ENST00000610907 CENPNQ96H22 339 aaPredicted RBP10.28□□□□□ -0.76
PABPC1-224ENST00000610907 KCTD14Q9BQ13 255 aaPredicted RBP10.28□□□□□ -0.76
PABPC1-224ENST00000610907 HAUS8Q9BT25 410 aa10.28□□□□□ -0.76
PABPC1-224ENST00000610907 C9orf16Q9BUW7 83 aa10.28□□□□□ -0.76
PABPC1-224ENST00000610907 NTMT1Q9BV86 223 aa10.28□□□□□ -0.76
PABPC1-224ENST00000610907 LRRC3Q9BY71 257 aa10.28□□□□□ -0.76
PABPC1-224ENST00000610907 CPEB1Q9BZB8 566 aaKnown RBP10.28□□□□□ -0.76
PABPC1-224ENST00000610907 TM6SF2Q9BZW4 377 aa10.28□□□□□ -0.76
PABPC1-224ENST00000610907 CD244Q9BZW8 370 aa10.28□□□□□ -0.76
PABPC1-224ENST00000610907 SEMA6AQ9H2E6 1030 aa10.28□□□□□ -0.76
PABPC1-224ENST00000610907 IPPKQ9H8X2 491 aa10.28□□□□□ -0.76
PABPC1-224ENST00000610907 NANOGQ9H9S0 305 aa10.28□□□□□ -0.76
PABPC1-224ENST00000610907 AGPAT4Q9NRZ5 378 aa10.28□□□□□ -0.76
PABPC1-224ENST00000610907 SAGE1Q9NXZ1 904 aa10.28□□□□□ -0.76
PABPC1-224ENST00000610907 CRLS1Q9UJA2 301 aa10.28□□□□□ -0.76
PABPC1-224ENST00000610907 AP3M1Q9Y2T2 418 aa10.28□□□□□ -0.76
PABPC1-224ENST00000610907 TRAV19A0A0A6YYK7 116 aa10.27□□□□□ -0.76
PABPC1-224ENST00000610907 ASPDHA6ND91 283 aa10.27□□□□□ -0.76
PABPC1-224ENST00000610907 ENO4A6NNW6 628 aa10.27□□□□□ -0.76
PABPC1-224ENST00000610907 LSM1O15116 133 aaKnown RBP10.27□□□□□ -0.76
PABPC1-224ENST00000610907 ARPC2O15144 300 aa10.27□□□□□ -0.76
PABPC1-224ENST00000610907 TEX28O15482 410 aa10.27□□□□□ -0.76
PABPC1-224ENST00000610907 TIPRLO75663 272 aa10.27□□□□□ -0.76
PABPC1-224ENST00000610907 BAIAP3O94812 1187 aa10.27□□□□□ -0.76
PABPC1-224ENST00000610907 CSPG5O95196 566 aa10.27□□□□□ -0.76
PABPC1-224ENST00000610907 CLDN7O95471 211 aa10.27□□□□□ -0.76
PABPC1-224ENST00000610907 TFAP2AP05549 437 aa10.27□□□□□ -0.76
PABPC1-224ENST00000610907 CKMP06732 381 aa10.27□□□□□ -0.76
PABPC1-224ENST00000610907 EBLN1P0CF75 366 aa10.27□□□□□ -0.76
PABPC1-224ENST00000610907 GABRR2P28476 465 aa10.27□□□□□ -0.76
PABPC1-224ENST00000610907 GSTT1P30711 240 aa10.27□□□□□ -0.76
PABPC1-224ENST00000610907 ATN1P54259 1190 aaPredicted RBP10.27□□□□□ -0.76
PABPC1-224ENST00000610907 NR1H2P55055 460 aa10.27□□□□□ -0.76
PABPC1-224ENST00000610907 POLE2P56282 527 aa10.27□□□□□ -0.76
PABPC1-224ENST00000610907 LMAN2Q12907 356 aa10.27□□□□□ -0.76
PABPC1-224ENST00000610907 TRAF3Q13114 568 aa10.27□□□□□ -0.76
PABPC1-224ENST00000610907 MAP7Q14244 749 aa10.27□□□□□ -0.76
PABPC1-224ENST00000610907 NRF1Q16656 503 aa10.27□□□□□ -0.76
PABPC1-224ENST00000610907 PITRM1Q5JRX3 1037 aa10.27□□□□□ -0.76
PABPC1-224ENST00000610907 PAGE3Q5JUK9 113 aa10.27□□□□□ -0.76
PABPC1-224ENST00000610907 BORAQ6PGQ7 559 aa10.27□□□□□ -0.76
PABPC1-224ENST00000610907 TPGS1Q6ZTW0 290 aa10.27□□□□□ -0.76
PABPC1-224ENST00000610907 CCDC149Q6ZUS6 474 aa10.27□□□□□ -0.76
PABPC1-224ENST00000610907 AMIGO2Q86SJ2 522 aa10.27□□□□□ -0.76
PABPC1-224ENST00000610907 ADGRG5Q8IZF4 528 aa10.27□□□□□ -0.76
PABPC1-224ENST00000610907 SFRP1Q8N474 314 aa10.27□□□□□ -0.76
PABPC1-224ENST00000610907 FIBCD1Q8N539 461 aa10.27□□□□□ -0.76
PABPC1-224ENST00000610907 ZNF557Q8N988 423 aaPredicted RBP10.27□□□□□ -0.76
PABPC1-224ENST00000610907 GLB1L3Q8NCI6 653 aaPredicted RBP10.27□□□□□ -0.76
PABPC1-224ENST00000610907 NAT14Q8WUY8 206 aa10.27□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms