RNA–Protein interactions for RNA: ENST00000608532.1

HDDC2-207, Transcript of HD domain containing 2, humanhuman

TSL 3

Gene HDDC2, Length 553 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-207ENST00000608532 TMEM143Q96AN5 459 aa4.03□□□□□ -1.76
HDDC2-207ENST00000608532 PELI2Q9HAT8 420 aa4.03□□□□□ -1.76
HDDC2-207ENST00000608532 OGFRQ9NZT2 677 aa4.03□□□□□ -1.76
HDDC2-207ENST00000608532 KCNJ14Q9UNX9 436 aa4.03□□□□□ -1.76
HDDC2-207ENST00000608532 MRPS28Q9Y2Q9 187 aaKnown RBP4.03□□□□□ -1.76
HDDC2-207ENST00000608532 CMAHPQ9Y471 501 aa4.03□□□□□ -1.76
HDDC2-207ENST00000608532 TDRD9Q8NDG6 1382 aaKnown RBP4.02□□□□□ -1.77
HDDC2-207ENST00000608532 STK36Q9NRP7 1315 aa4.02□□□□□ -1.77
HDDC2-207ENST00000608532 A0A1B0GU03 582 aa4.02□□□□□ -1.77
HDDC2-207ENST00000608532 MAGEB17A8MXT2 336 aa4.02□□□□□ -1.77
HDDC2-207ENST00000608532 PSMD14O00487 310 aa4.02□□□□□ -1.77
HDDC2-207ENST00000608532 GPR137BO60478 399 aa4.02□□□□□ -1.77
HDDC2-207ENST00000608532 RB1P06400 928 aa4.02□□□□□ -1.77
HDDC2-207ENST00000608532 SELLP14151 372 aa4.02□□□□□ -1.77
HDDC2-207ENST00000608532 GNB3P16520 340 aa4.02□□□□□ -1.77
HDDC2-207ENST00000608532 CDH8P55286 799 aa4.02□□□□□ -1.77
HDDC2-207ENST00000608532 CDH11P55287 796 aa4.02□□□□□ -1.77
HDDC2-207ENST00000608532 PLA2G7Q13093 441 aa4.02□□□□□ -1.77
HDDC2-207ENST00000608532 MFAP5Q13361 173 aa4.02□□□□□ -1.77
HDDC2-207ENST00000608532 KIAA1644Q3SXP7 199 aa4.02□□□□□ -1.77
HDDC2-207ENST00000608532 FFAR4Q5NUL3 377 aa4.02□□□□□ -1.77
HDDC2-207ENST00000608532 CCDC30Q5VVM6 783 aa4.02□□□□□ -1.77
HDDC2-207ENST00000608532 ALS2CLQ60I27 953 aa4.02□□□□□ -1.77
HDDC2-207ENST00000608532 FAAH2Q6GMR7 532 aa4.02□□□□□ -1.77
HDDC2-207ENST00000608532 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.02□□□□□ -1.77
HDDC2-207ENST00000608532 MFSD6Q6ZSS7 791 aa4.02□□□□□ -1.77
HDDC2-207ENST00000608532 DENND5BQ6ZUT9 1274 aa4.02□□□□□ -1.77
HDDC2-207ENST00000608532 CHST9Q7L1S5 443 aa4.02□□□□□ -1.77
HDDC2-207ENST00000608532 ARID3BQ8IVW6 561 aaPredicted RBP4.02□□□□□ -1.77
HDDC2-207ENST00000608532 CRYBG2Q8N1P7 616 aa4.02□□□□□ -1.77
HDDC2-207ENST00000608532 DNAJC22Q8N4W6 341 aa4.02□□□□□ -1.77
HDDC2-207ENST00000608532 NGEFQ8N5V2 710 aa4.02□□□□□ -1.77
HDDC2-207ENST00000608532 WDR20Q8TBZ3 569 aa4.02□□□□□ -1.77
HDDC2-207ENST00000608532 TMEM190Q8WZ59 177 aa4.02□□□□□ -1.77
HDDC2-207ENST00000608532 USP6NLQ92738 828 aa4.02□□□□□ -1.77
HDDC2-207ENST00000608532 PAG1Q9NWQ8 432 aa4.02□□□□□ -1.77
HDDC2-207ENST00000608532 TRMT1Q9NXH9 659 aaKnown RBP4.02□□□□□ -1.77
HDDC2-207ENST00000608532 FBXL17Q9UF56 701 aa4.02□□□□□ -1.77
HDDC2-207ENST00000608532 PCDHGA5Q9Y5G8 931 aa4.02□□□□□ -1.77
HDDC2-207ENST00000608532 OR6C76A6NM76 312 aa4.01□□□□□ -1.77
HDDC2-207ENST00000608532 A8MZ25 164 aa4.01□□□□□ -1.77
HDDC2-207ENST00000608532 NR5A2O00482 541 aa4.01□□□□□ -1.77
HDDC2-207ENST00000608532 GH2P01242 217 aa4.01□□□□□ -1.77
HDDC2-207ENST00000608532 IGLV1-44P01699 117 aa4.01□□□□□ -1.77
HDDC2-207ENST00000608532 H1F0P07305 194 aaKnown RBP4.01□□□□□ -1.77
HDDC2-207ENST00000608532 THOP1P52888 689 aa4.01□□□□□ -1.77
HDDC2-207ENST00000608532 RPS18P62269 152 aaKnown RBP4.01□□□□□ -1.77
HDDC2-207ENST00000608532 RARS2Q5T160 578 aaKnown RBP4.01□□□□□ -1.77
HDDC2-207ENST00000608532 LCE1FQ5T754 118 aa4.01□□□□□ -1.77
HDDC2-207ENST00000608532 ADALQ6DHV7 355 aa4.01□□□□□ -1.77
HDDC2-207ENST00000608532 KLC3Q6P597 504 aa4.01□□□□□ -1.77
HDDC2-207ENST00000608532 ZNF497Q6ZNH5 498 aa4.01□□□□□ -1.77
HDDC2-207ENST00000608532 NOTCH2NLQ7Z3S9 236 aa4.01□□□□□ -1.77
HDDC2-207ENST00000608532 KRTAP7-1Q8IUC3 87 aa4.01□□□□□ -1.77
HDDC2-207ENST00000608532 SCYL3Q8IZE3 742 aa4.01□□□□□ -1.77
HDDC2-207ENST00000608532 OR2T12Q8NG77 320 aa4.01□□□□□ -1.77
HDDC2-207ENST00000608532 SCFD2Q8WU76 684 aa4.01□□□□□ -1.77
HDDC2-207ENST00000608532 HDAC2Q92769 488 aaKnown RBP4.01□□□□□ -1.77
HDDC2-207ENST00000608532 ART5Q96L15 291 aa4.01□□□□□ -1.77
HDDC2-207ENST00000608532 ZNF582Q96NG8 517 aaPredicted RBP4.01□□□□□ -1.77
HDDC2-207ENST00000608532 SRSF8Q9BRL6 282 aaKnown RBP4.01□□□□□ -1.77
HDDC2-207ENST00000608532 SIX2Q9NPC8 291 aa4.01□□□□□ -1.77
HDDC2-207ENST00000608532 EIF2B3Q9NR50 452 aaKnown RBP4.01□□□□□ -1.77
HDDC2-207ENST00000608532 LYVE1Q9Y5Y7 322 aa4.01□□□□□ -1.77
HDDC2-207ENST00000608532 SEC23IPQ9Y6Y8 1000 aaKnown RBP4.01□□□□□ -1.77
HDDC2-207ENST00000608532 SNED1Q8TER0 1413 aa4.01□□□□□ -1.77
HDDC2-207ENST00000608532 A0A087X0M5 115 aa4□□□□□ -1.77
HDDC2-207ENST00000608532 A0A1B0GX30 115 aa4□□□□□ -1.77
HDDC2-207ENST00000608532 CSPG5O95196 566 aa4□□□□□ -1.77
HDDC2-207ENST00000608532 SCGB1D1O95968 90 aa4□□□□□ -1.77
HDDC2-207ENST00000608532 ACP2P11117 423 aa4□□□□□ -1.77
HDDC2-207ENST00000608532 ACADMP11310 421 aa4□□□□□ -1.77
HDDC2-207ENST00000608532 LIFP15018 202 aa4□□□□□ -1.77
HDDC2-207ENST00000608532 GABRB1P18505 474 aa4□□□□□ -1.77
HDDC2-207ENST00000608532 TNFAIP3P21580 790 aa4□□□□□ -1.77
HDDC2-207ENST00000608532 PON1P27169 355 aa4□□□□□ -1.77
HDDC2-207ENST00000608532 NMBRP28336 390 aa4□□□□□ -1.77
HDDC2-207ENST00000608532 KCNJ10P78508 379 aa4□□□□□ -1.77
HDDC2-207ENST00000608532 TMEM187Q14656 261 aa4□□□□□ -1.77
HDDC2-207ENST00000608532 ZFP69Q49AA0 526 aa4□□□□□ -1.77
HDDC2-207ENST00000608532 ZC2HC1BQ5TFG8 222 aa4□□□□□ -1.77
HDDC2-207ENST00000608532 ARHGEF16Q5VV41 709 aa4□□□□□ -1.77
HDDC2-207ENST00000608532 ISCA2Q86U28 154 aa4□□□□□ -1.77
HDDC2-207ENST00000608532 PLD3Q8IV08 490 aa4□□□□□ -1.77
HDDC2-207ENST00000608532 L3MBTL4Q8NA19 623 aa4□□□□□ -1.77
HDDC2-207ENST00000608532 TRAF4Q9BUZ4 470 aaPredicted RBP4□□□□□ -1.77
HDDC2-207ENST00000608532 SLA2Q9H6Q3 261 aa4□□□□□ -1.77
HDDC2-207ENST00000608532 OLFML3Q9NRN5 406 aa4□□□□□ -1.77
HDDC2-207ENST00000608532 SEPT11Q9NVA2 429 aaKnown RBP4□□□□□ -1.77
HDDC2-207ENST00000608532 NENFQ9UMX5 172 aa4□□□□□ -1.77
HDDC2-207ENST00000608532 RABGAP1Q9Y3P9 1069 aa4□□□□□ -1.77
HDDC2-207ENST00000608532 PI4KAP2A4QPH2 592 aa3.99□□□□□ -1.77
HDDC2-207ENST00000608532 PGPEP1LA6NFU8 196 aa3.99□□□□□ -1.77
HDDC2-207ENST00000608532 SLC22A2O15244 555 aa3.99□□□□□ -1.77
HDDC2-207ENST00000608532 NDUFS4O43181 175 aa3.99□□□□□ -1.77
HDDC2-207ENST00000608532 USO1O60763 962 aaKnown RBP3.99□□□□□ -1.77
HDDC2-207ENST00000608532 ZNF821O75541 412 aaPredicted RBP3.99□□□□□ -1.77
HDDC2-207ENST00000608532 RSL1D1O76021 490 aaKnown RBP3.99□□□□□ -1.77
HDDC2-207ENST00000608532 OR2C1O95371 312 aa3.99□□□□□ -1.77
HDDC2-207ENST00000608532 NGFP01138 241 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms