RNA–Protein interactions for RNA: ENST00000604306.1

NEDD8-MDP1-203, Transcript of NEDD8-MDP1 readthrough, humanhuman

TSL 5

Gene NEDD8-MDP1, Length 681 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1-203ENST00000604306 RFWD2Q8NHY2 731 aa12.09□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 LKAAEAR1Q8TD35 194 aa12.09□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 LRCH3Q96II8 777 aa12.09□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 HIC2Q96JB3 615 aa12.09□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 RMDN2Q96LZ7 410 aa12.09□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 CCM2Q9BSQ5 444 aa12.09□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 C1QTNF2Q9BXJ5 285 aa12.09□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 SARS2Q9NP81 518 aaKnown RBP12.09□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 SAR1AQ9NR31 198 aa12.09□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 NCKAP1Q9Y2A7 1128 aa12.09□□□□□ -0.47
NEDD8-MDP1-203ENST00000604306 LRP4O75096 1905 aa12.08□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 A0A1W2PP55 124 aa12.08□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 SHISA7A6NL88 538 aa12.08□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 IQCF5A8MTL0 148 aa12.08□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 UBXN8O00124 270 aa12.08□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 ZNF195O14628 629 aa12.08□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 MMP20O60882 483 aa12.08□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 IGLV3-19P01714 112 aa12.08□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 SERPINA6P08185 405 aa12.08□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 HOXC4P09017 264 aaPredicted RBP12.08□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 VCLP18206 1134 aa12.08□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 TRIM23P36406 574 aa12.08□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 PIK3CGP48736 1102 aa12.08□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 HNMTP50135 292 aa12.08□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 AQP5P55064 265 aa12.08□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 INHBCP55103 352 aa12.08□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 HNRNPH2P55795 449 aaKnown RBP12.08□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 LCP2Q13094 533 aa12.08□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 LRRC32Q14392 662 aa12.08□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 SKIV2LQ15477 1246 aaKnown RBP12.08□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 MLF2Q15773 248 aaPredicted RBP12.08□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 ZNF658BQ4V348 819 aaPredicted RBP12.08□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 SLC44A4Q53GD3 710 aa12.08□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 UNC50Q53HI1 259 aa12.08□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 ACSBG2Q5FVE4 666 aa12.08□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 SEL1L3Q68CR1 1132 aa12.08□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 SULT1C3Q6IMI6 304 aa12.08□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 KIAA1211LQ6NV74 962 aa12.08□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 PNCKQ6P2M8 343 aa12.08□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 EPGNQ6UW88 154 aa12.08□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 ZNF852Q6ZMS4 543 aa12.08□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 EFL1Q7Z2Z2 1120 aaKnown RBP12.08□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 CCNYL1Q8N7R7 359 aa12.08□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 ZNF781Q8N8C0 355 aa12.08□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 PTGR2Q8N8N7 351 aaPredicted RBP12.08□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 RASGEF1AQ8N9B8 481 aa12.08□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 FBXO15Q8NCQ5 510 aaPredicted RBP12.08□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 ZNF483Q8TF39 744 aaPredicted RBP12.08□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 SGF29Q96ES7 293 aa12.08□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 CCDC97Q96F63 343 aaPredicted RBP12.08□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 CCT7Q99832 543 aa12.08□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 CCDC28BQ9BUN5 200 aa12.08□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 SLC12A9Q9BXP2 914 aa12.08□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 TEX101Q9BY14 249 aa12.08□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 TRIM54Q9BYV2 358 aa12.08□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 MKRN2Q9H000 416 aaKnown RBP12.08□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 MYLK2Q9H1R3 596 aa12.08□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 RMI1Q9H9A7 625 aa12.08□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 COG4Q9H9E3 785 aa12.08□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 FBXL12Q9NXK8 326 aa12.08□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 DCTN4Q9UJW0 460 aa12.08□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 MRPS17Q9Y2R5 130 aaKnown RBP12.08□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 MTF2Q9Y483 593 aaPredicted RBP12.08□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 SLC5A10A0PJK1 596 aa12.07□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 NEMP2A6NFY4 417 aa12.07□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 C10orf142B7Z368 130 aa12.07□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 GFYI3L273 518 aa12.07□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 TOR1BO14657 336 aa12.07□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 CHUKO15111 745 aa12.07□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 SLC22A2O15244 555 aa12.07□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 FFAR2O15552 330 aa12.07□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 KCNJ13O60928 360 aa12.07□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 LILRB5O75023 590 aa12.07□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 RNASEH2AO75792 299 aaKnown RBP12.07□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 SUPT7LO94864 414 aa12.07□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 MATN4O95460 622 aa12.07□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 ADSLP30566 484 aaPredicted RBP12.07□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 GGT5P36269 586 aa12.07□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 WASP42768 502 aa12.07□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 ADPRHP54922 357 aa12.07□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 PKNOX1P55347 436 aa12.07□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 RPA4Q13156 261 aa12.07□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 KRT72Q14CN4 511 aa12.07□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 PFKFB4Q16877 469 aa12.07□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.07□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 RNF165Q6ZSG1 346 aa12.07□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 ADGRG6Q86SQ4 1221 aa12.07□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 TRIM69Q86WT6 500 aa12.07□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 HORMAD1Q86X24 394 aa12.07□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 SLC22A15Q8IZD6 547 aa12.07□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 FITM2Q8N6M3 262 aa12.07□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 ASB11Q8WXH4 323 aa12.07□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 FAM136AQ96C01 138 aa12.07□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 PHF21BQ96EK2 531 aa12.07□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 SIPA1Q96FS4 1042 aa12.07□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 MAELQ96JY0 434 aaKnown RBP12.07□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 FAM161BQ96MY7 647 aa12.07□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 GUCD1Q96NT3 240 aa12.07□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 LENG8Q96PV6 779 aaPredicted RBP12.07□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 NUSAP1Q9BXS6 441 aaKnown RBP12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms