RNA–Protein interactions for RNA: ENST00000602557.5

CSMD1-216, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 11,740 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-216ENST00000602557 NOS2P35228 1153 aa8.61□□□□□ -1.03
CSMD1-216ENST00000602557 TIE1P35590 1138 aa8.61□□□□□ -1.03
CSMD1-216ENST00000602557 CYP2U1Q7Z449 544 aa8.61□□□□□ -1.03
CSMD1-216ENST00000602557 GOLM1Q8NBJ4 401 aa8.61□□□□□ -1.03
CSMD1-216ENST00000602557 ADAM2Q99965 735 aa8.61□□□□□ -1.03
CSMD1-216ENST00000602557 PCM1Q15154 2024 aa8.61□□□□□ -1.03
CSMD1-216ENST00000602557 IFNA6P05013 189 aa8.61□□□□□ -1.03
CSMD1-216ENST00000602557 XRCC1P18887 633 aaPredicted RBP8.61□□□□□ -1.03
CSMD1-216ENST00000602557 ATP5C1P36542 298 aaKnown RBP8.61□□□□□ -1.03
CSMD1-216ENST00000602557 SMIM11AP58511 58 aa8.61□□□□□ -1.03
CSMD1-216ENST00000602557 RGS1Q08116 209 aa8.61□□□□□ -1.03
CSMD1-216ENST00000602557 CUZD1Q86UP6 607 aa8.61□□□□□ -1.03
CSMD1-216ENST00000602557 OR2T12Q8NG77 320 aa8.61□□□□□ -1.03
CSMD1-216ENST00000602557 RFT1Q96AA3 541 aa8.61□□□□□ -1.03
CSMD1-216ENST00000602557 PRODHO43272 600 aa8.61□□□□□ -1.03
CSMD1-216ENST00000602557 IL7RP16871 459 aa8.61□□□□□ -1.03
CSMD1-216ENST00000602557 RPL9P32969 192 aaKnown RBP8.61□□□□□ -1.03
CSMD1-216ENST00000602557 ARHGDIBP52566 201 aa8.61□□□□□ -1.03
CSMD1-216ENST00000602557 PRKG2Q13237 762 aa8.61□□□□□ -1.03
CSMD1-216ENST00000602557 SEMA5AQ13591 1074 aa8.61□□□□□ -1.03
CSMD1-216ENST00000602557 PIWIL4Q7Z3Z4 852 aaKnown RBP8.61□□□□□ -1.03
CSMD1-216ENST00000602557 HDAC10Q969S8 669 aa8.61□□□□□ -1.03
CSMD1-216ENST00000602557 EMID1Q96A84 441 aaPredicted RBP8.61□□□□□ -1.03
CSMD1-216ENST00000602557 AGXT2Q9BYV1 514 aa8.61□□□□□ -1.03
CSMD1-216ENST00000602557 LRRC4CQ9HCJ2 640 aa8.61□□□□□ -1.03
CSMD1-216ENST00000602557 PAK6Q9NQU5 681 aaPredicted RBP8.61□□□□□ -1.03
CSMD1-216ENST00000602557 MAGEL2Q9UJ55 1249 aa8.61□□□□□ -1.03
CSMD1-216ENST00000602557 GPSM3Q9Y4H4 160 aa8.61□□□□□ -1.03
CSMD1-216ENST00000602557 NUPL2O15504 423 aaKnown RBP8.61□□□□□ -1.03
CSMD1-216ENST00000602557 VNN2O95498 520 aa8.61□□□□□ -1.03
CSMD1-216ENST00000602557 SMIM10L2AP0DMW4 78 aa8.61□□□□□ -1.03
CSMD1-216ENST00000602557 SMIM10L2BP0DMW5 78 aa8.61□□□□□ -1.03
CSMD1-216ENST00000602557 CXCR2P25025 360 aa8.61□□□□□ -1.03
CSMD1-216ENST00000602557 LCN1P31025 176 aa8.61□□□□□ -1.03
CSMD1-216ENST00000602557 ADCYAP1R1P41586 468 aa8.61□□□□□ -1.03
CSMD1-216ENST00000602557 CPSF6Q16630 551 aaKnown RBP eCLIP8.61□□□□□ -1.03
CSMD1-216ENST00000602557 SYT16Q17RD7 645 aa8.61□□□□□ -1.03
CSMD1-216ENST00000602557 ADAMTSL2Q86TH1 951 aa8.61□□□□□ -1.03
CSMD1-216ENST00000602557 AADATQ8N5Z0 425 aa8.61□□□□□ -1.03
CSMD1-216ENST00000602557 OR8K3Q8NH51 312 aa8.61□□□□□ -1.03
CSMD1-216ENST00000602557 SLC39A8Q9C0K1 460 aa8.61□□□□□ -1.03
CSMD1-216ENST00000602557 FAM105AQ9NUU6 356 aa8.61□□□□□ -1.03
CSMD1-216ENST00000602557 TVP23AA6NH52 213 aa8.61□□□□□ -1.03
CSMD1-216ENST00000602557 ZNF182P17025 639 aaPredicted RBP8.61□□□□□ -1.03
CSMD1-216ENST00000602557 IDH3AP50213 366 aa8.61□□□□□ -1.03
CSMD1-216ENST00000602557 CDKL4Q5MAI5 379 aa8.61□□□□□ -1.03
CSMD1-216ENST00000602557 FBXL16Q8N461 479 aa8.61□□□□□ -1.03
CSMD1-216ENST00000602557 TRPM4Q8TD43 1214 aa8.61□□□□□ -1.03
CSMD1-216ENST00000602557 CSGALNACT1Q8TDX6 532 aa8.61□□□□□ -1.03
CSMD1-216ENST00000602557 DHRS1Q96LJ7 313 aa8.61□□□□□ -1.03
CSMD1-216ENST00000602557 NDUFAF4Q9P032 175 aa8.61□□□□□ -1.03
CSMD1-216ENST00000602557 TRPV2Q9Y5S1 764 aa8.61□□□□□ -1.03
CSMD1-216ENST00000602557 FKBP7Q9Y680 259 aa8.61□□□□□ -1.03
CSMD1-216ENST00000602557 KCNE2Q9Y6J6 123 aa8.61□□□□□ -1.03
CSMD1-216ENST00000602557 GSAPA4D1B5 854 aa8.6□□□□□ -1.03
CSMD1-216ENST00000602557 GPD2P43304 727 aa8.6□□□□□ -1.03
CSMD1-216ENST00000602557 OR2L5Q8NG80 312 aa8.6□□□□□ -1.03
CSMD1-216ENST00000602557 ZFP28Q8NHY6 868 aa8.6□□□□□ -1.03
CSMD1-216ENST00000602557 IPCEF1Q8WWN9 437 aaPredicted RBP8.6□□□□□ -1.03
CSMD1-216ENST00000602557 SPATA5L1Q9BVQ7 753 aa8.6□□□□□ -1.03
CSMD1-216ENST00000602557 LMAN2LQ9H0V9 348 aa8.6□□□□□ -1.03
CSMD1-216ENST00000602557 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.6□□□□□ -1.03
CSMD1-216ENST00000602557 IFT172Q9UG01 1749 aa8.6□□□□□ -1.03
CSMD1-216ENST00000602557 hCG_1818297A0A087WSY0 165 aa8.6□□□□□ -1.03
CSMD1-216ENST00000602557 DISC1C4P0D8 188 aa8.6□□□□□ -1.03
CSMD1-216ENST00000602557 EI24O14681 340 aa8.6□□□□□ -1.03
CSMD1-216ENST00000602557 KRT33AO76009 404 aa8.6□□□□□ -1.03
CSMD1-216ENST00000602557 AMHP03971 560 aa8.6□□□□□ -1.03
CSMD1-216ENST00000602557 MBTD1Q05BQ5 628 aa8.6□□□□□ -1.03
CSMD1-216ENST00000602557 MPPE1Q53F39 396 aa8.6□□□□□ -1.03
CSMD1-216ENST00000602557 CPTPQ5TA50 214 aa8.6□□□□□ -1.03
CSMD1-216ENST00000602557 LRRC38Q5VT99 294 aa8.6□□□□□ -1.03
CSMD1-216ENST00000602557 SDHAF4Q5VUM1 108 aa8.6□□□□□ -1.03
CSMD1-216ENST00000602557 TSNAXQ99598 290 aaKnown RBP8.6□□□□□ -1.03
CSMD1-216ENST00000602557 PSMD9O00233 223 aa8.6□□□□□ -1.03
CSMD1-216ENST00000602557 WWP2O00308 870 aa8.6□□□□□ -1.03
CSMD1-216ENST00000602557 GTPBP3Q969Y2 492 aaKnown RBP8.6□□□□□ -1.03
CSMD1-216ENST00000602557 ITCHQ96J02 903 aa8.6□□□□□ -1.03
CSMD1-216ENST00000602557 SSX3Q99909 188 aa8.6□□□□□ -1.03
CSMD1-216ENST00000602557 ZNF670Q9BS34 389 aa8.6□□□□□ -1.03
CSMD1-216ENST00000602557 TMEM39AQ9NV64 488 aa8.6□□□□□ -1.03
CSMD1-216ENST00000602557 COL6A1P12109 1028 aa8.6□□□□□ -1.03
CSMD1-216ENST00000602557 TNFSF9P41273 254 aa8.6□□□□□ -1.03
CSMD1-216ENST00000602557 AP3S2P59780 193 aa8.6□□□□□ -1.03
CSMD1-216ENST00000602557 USP30Q70CQ3 517 aa8.6□□□□□ -1.03
CSMD1-216ENST00000602557 ACMSDQ8TDX5 336 aa8.6□□□□□ -1.03
CSMD1-216ENST00000602557 LENG8Q96PV6 779 aaPredicted RBP8.6□□□□□ -1.03
CSMD1-216ENST00000602557 ZNF607Q96SK3 696 aa8.6□□□□□ -1.03
CSMD1-216ENST00000602557 PKP2Q99959 881 aa8.6□□□□□ -1.03
CSMD1-216ENST00000602557 NANSQ9NR45 359 aa8.6□□□□□ -1.03
CSMD1-216ENST00000602557 SERPINB7O75635 380 aa8.6□□□□□ -1.03
CSMD1-216ENST00000602557 TRBC1P01850 177 aa8.6□□□□□ -1.03
CSMD1-216ENST00000602557 TAS2R40P59535 323 aa8.6□□□□□ -1.03
CSMD1-216ENST00000602557 MERTKQ12866 999 aa8.6□□□□□ -1.03
CSMD1-216ENST00000602557 KCNC2Q96PR1 638 aa8.6□□□□□ -1.03
CSMD1-216ENST00000602557 WACQ9BTA9 647 aa8.6□□□□□ -1.03
CSMD1-216ENST00000602557 ATG10Q9H0Y0 220 aa8.6□□□□□ -1.03
CSMD1-216ENST00000602557 LRRC19Q9H756 370 aa8.6□□□□□ -1.03
CSMD1-216ENST00000602557 ASAH2Q9NR71 780 aa8.6□□□□□ -1.03
CSMD1-216ENST00000602557 TCRBV7S2A1N4TA0A589 114 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms