RNA–Protein interactions for RNA: ENST00000602011.5

SHKBP1-227, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-227ENST00000602011 LRFN5Q96NI6 719 aa17.43■□□□□ 0.38
SHKBP1-227ENST00000602011 TUBB2BQ9BVA1 445 aa17.43■□□□□ 0.38
SHKBP1-227ENST00000602011 LATS2Q9NRM7 1088 aa17.43■□□□□ 0.38
SHKBP1-227ENST00000602011 FGF21Q9NSA1 209 aa17.43■□□□□ 0.38
SHKBP1-227ENST00000602011 TRIM10Q9UDY6 481 aa17.43■□□□□ 0.38
SHKBP1-227ENST00000602011 TLK1Q9UKI8 766 aa17.43■□□□□ 0.38
SHKBP1-227ENST00000602011 IGHV5-51A0A0C4DH38 117 aa17.42■□□□□ 0.38
SHKBP1-227ENST00000602011 MGAT4DA6NG13 374 aa17.42■□□□□ 0.38
SHKBP1-227ENST00000602011 MATN2O00339 956 aa17.42■□□□□ 0.38
SHKBP1-227ENST00000602011 PSTPIP1O43586 416 aa17.42■□□□□ 0.38
SHKBP1-227ENST00000602011 SPOPO43791 374 aa17.42■□□□□ 0.38
SHKBP1-227ENST00000602011 CST8O60676 142 aa17.42■□□□□ 0.38
SHKBP1-227ENST00000602011 ZRANB2O95218 330 aaKnown RBP eCLIP17.42■□□□□ 0.38
SHKBP1-227ENST00000602011 ZBTB11O95625 1053 aaPredicted RBP17.42■□□□□ 0.38
SHKBP1-227ENST00000602011 KLK3P07288 261 aaPredicted RBP17.42■□□□□ 0.38
SHKBP1-227ENST00000602011 MSH3P20585 1137 aa17.42■□□□□ 0.38
SHKBP1-227ENST00000602011 DYNLT1P63172 113 aa17.42■□□□□ 0.38
SHKBP1-227ENST00000602011 WASHC5Q12768 1159 aa17.42■□□□□ 0.38
SHKBP1-227ENST00000602011 PLCL1Q15111 1095 aa17.42■□□□□ 0.38
SHKBP1-227ENST00000602011 CHRNA6Q15825 494 aa17.42■□□□□ 0.38
SHKBP1-227ENST00000602011 UGT8Q16880 541 aa17.42■□□□□ 0.38
SHKBP1-227ENST00000602011 SIRPB2Q5JXA9 342 aa17.42■□□□□ 0.38
SHKBP1-227ENST00000602011 DNTTIP2Q5QJE6 756 aaKnown RBP17.42■□□□□ 0.38
SHKBP1-227ENST00000602011 PWWP2BQ6NUJ5 590 aa17.42■□□□□ 0.38
SHKBP1-227ENST00000602011 MFSD7Q6UXD7 560 aa17.42■□□□□ 0.38
SHKBP1-227ENST00000602011 HPS6Q86YV9 775 aa17.42■□□□□ 0.38
SHKBP1-227ENST00000602011 RCOR2Q8IZ40 523 aa17.42■□□□□ 0.38
SHKBP1-227ENST00000602011 ZNF398Q8TD17 642 aa17.42■□□□□ 0.38
SHKBP1-227ENST00000602011 CT55Q8WUE5 264 aa17.42■□□□□ 0.38
SHKBP1-227ENST00000602011 HEXDCQ8WVB3 486 aa17.42■□□□□ 0.38
SHKBP1-227ENST00000602011 CCM2Q9BSQ5 444 aa17.42■□□□□ 0.38
SHKBP1-227ENST00000602011 NHEJ1Q9H9Q4 299 aaPredicted RBP17.42■□□□□ 0.38
SHKBP1-227ENST00000602011 KCND1Q9NSA2 647 aa17.42■□□□□ 0.38
SHKBP1-227ENST00000602011 HRASLS2Q9NWW9 162 aa17.42■□□□□ 0.38
SHKBP1-227ENST00000602011 UBP1Q9NZI7 540 aa17.42■□□□□ 0.38
SHKBP1-227ENST00000602011 KLHL8Q9P2G9 620 aaPredicted RBP17.42■□□□□ 0.38
SHKBP1-227ENST00000602011 FARSAQ9Y285 508 aaKnown RBP17.42■□□□□ 0.38
SHKBP1-227ENST00000602011 PCDHGA9Q9Y5G4 932 aaKnown RBP17.42■□□□□ 0.38
SHKBP1-227ENST00000602011 HEBP2Q9Y5Z4 205 aa17.42■□□□□ 0.38
SHKBP1-227ENST00000602011 OR5K3A6NET4 321 aa17.41■□□□□ 0.38
SHKBP1-227ENST00000602011 C2orf81A6NN90 581 aa17.41■□□□□ 0.38
SHKBP1-227ENST00000602011 STX7O15400 261 aaKnown RBP17.41■□□□□ 0.38
SHKBP1-227ENST00000602011 MAP3K7O43318 606 aa17.41■□□□□ 0.38
SHKBP1-227ENST00000602011 CPNE3O75131 537 aaKnown RBP17.41■□□□□ 0.38
SHKBP1-227ENST00000602011 ZNF189O75820 626 aaPredicted RBP17.41■□□□□ 0.38
SHKBP1-227ENST00000602011 ANXA9O76027 345 aa17.41■□□□□ 0.38
SHKBP1-227ENST00000602011 RALBP11234 206 aa17.41■□□□□ 0.38
SHKBP1-227ENST00000602011 MTHFD1P11586 935 aaKnown RBP17.41■□□□□ 0.38
SHKBP1-227ENST00000602011 FOLR1P15328 257 aa17.41■□□□□ 0.38
SHKBP1-227ENST00000602011 NFKB1P19838 968 aa17.41■□□□□ 0.38
SHKBP1-227ENST00000602011 VARSP26640 1264 aaKnown RBP17.41■□□□□ 0.38
SHKBP1-227ENST00000602011 CD68P34810 354 aaPredicted RBP17.41■□□□□ 0.38
SHKBP1-227ENST00000602011 HADHBP55084 474 aaKnown RBP17.41■□□□□ 0.38
SHKBP1-227ENST00000602011 MLLT10P55197 1068 aa17.41■□□□□ 0.38
SHKBP1-227ENST00000602011 GSDMDP57764 484 aa17.41■□□□□ 0.38
SHKBP1-227ENST00000602011 XRCC4Q13426 336 aa17.41■□□□□ 0.38
SHKBP1-227ENST00000602011 TFDP3Q5H9I0 405 aa17.41■□□□□ 0.38
SHKBP1-227ENST00000602011 GPRC6AQ5T6X5 926 aa17.41■□□□□ 0.38
SHKBP1-227ENST00000602011 OR2L2Q8NH16 312 aa17.41■□□□□ 0.38
SHKBP1-227ENST00000602011 MRGPRX2Q96LB1 330 aa17.41■□□□□ 0.38
SHKBP1-227ENST00000602011 LINC00615Q96LM1 132 aaPredicted RBP17.41■□□□□ 0.38
SHKBP1-227ENST00000602011 PSMG3-AS1Q96PY0 264 aa17.41■□□□□ 0.38
SHKBP1-227ENST00000602011 ACTL8Q9H568 366 aa17.41■□□□□ 0.38
SHKBP1-227ENST00000602011 ABHD10Q9NUJ1 306 aa17.41■□□□□ 0.38
SHKBP1-227ENST00000602011 G3BP2Q9UN86 482 aaKnown RBP17.41■□□□□ 0.38
SHKBP1-227ENST00000602011 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.41■□□□□ 0.38
SHKBP1-227ENST00000602011 NOTCH2Q04721 2471 aa17.41■□□□□ 0.38
SHKBP1-227ENST00000602011 C5orf60A6NFR6 353 aa17.4■□□□□ 0.38
SHKBP1-227ENST00000602011 UGT1A9O60656 530 aa17.4■□□□□ 0.38
SHKBP1-227ENST00000602011 VPS4BO75351 444 aa17.4■□□□□ 0.38
SHKBP1-227ENST00000602011 FURINP09958 794 aa17.4■□□□□ 0.38
SHKBP1-227ENST00000602011 UGT1A6P19224 532 aa17.4■□□□□ 0.38
SHKBP1-227ENST00000602011 COMTP21964 271 aa17.4■□□□□ 0.38
SHKBP1-227ENST00000602011 LPOP22079 712 aaPredicted RBP17.4■□□□□ 0.38
SHKBP1-227ENST00000602011 UGT1A1P22309 533 aa17.4■□□□□ 0.38
SHKBP1-227ENST00000602011 UGT1A4P22310 534 aa17.4■□□□□ 0.38
SHKBP1-227ENST00000602011 PRKAA1Q13131 559 aa17.4■□□□□ 0.38
SHKBP1-227ENST00000602011 IZUMO3Q5VZ72 239 aa17.4■□□□□ 0.38
SHKBP1-227ENST00000602011 FAM151BQ6UXP7 276 aa17.4■□□□□ 0.38
SHKBP1-227ENST00000602011 ZNF517Q6ZMY9 492 aaPredicted RBP17.4■□□□□ 0.38
SHKBP1-227ENST00000602011 EFCAB3Q8N7B9 438 aa17.4■□□□□ 0.38
SHKBP1-227ENST00000602011 BLOC1S5Q8TDH9 187 aa17.4■□□□□ 0.38
SHKBP1-227ENST00000602011 PPP1R2P1Q96PQ5 205 aa17.4■□□□□ 0.38
SHKBP1-227ENST00000602011 MAP3K3Q99759 626 aa17.4■□□□□ 0.38
SHKBP1-227ENST00000602011 FSD1LQ9BXM9 530 aa17.4■□□□□ 0.38
SHKBP1-227ENST00000602011 UGT1A7Q9HAW7 530 aa17.4■□□□□ 0.38
SHKBP1-227ENST00000602011 UGT1A10Q9HAW8 530 aa17.4■□□□□ 0.38
SHKBP1-227ENST00000602011 UGT1A8Q9HAW9 530 aa17.4■□□□□ 0.38
SHKBP1-227ENST00000602011 FANCEQ9HB96 536 aa17.4■□□□□ 0.38
SHKBP1-227ENST00000602011 VPS4AQ9UN37 437 aa17.4■□□□□ 0.38
SHKBP1-227ENST00000602011 ICE1Q9Y2F5 2266 aa17.4■□□□□ 0.38
SHKBP1-227ENST00000602011 SPTBN1Q01082 2364 aaKnown RBP17.39■□□□□ 0.38
SHKBP1-227ENST00000602011 RAB40ALP0C0E4 278 aa17.39■□□□□ 0.37
SHKBP1-227ENST00000602011 MSL3P1P0C860 447 aa17.39■□□□□ 0.37
SHKBP1-227ENST00000602011 AKT1P31749 480 aa17.39■□□□□ 0.37
SHKBP1-227ENST00000602011 CTSCP53634 463 aa17.39■□□□□ 0.37
SHKBP1-227ENST00000602011 GEMP55040 296 aa17.39■□□□□ 0.37
SHKBP1-227ENST00000602011 NFE2L1Q14494 772 aa17.39■□□□□ 0.37
SHKBP1-227ENST00000602011 C4orf17Q53FE4 359 aa17.39■□□□□ 0.37
SHKBP1-227ENST00000602011 ITPRIPL1Q6GPH6 555 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms