RNA–Protein interactions for RNA: ENST00000601220.5

CHMP2A-208, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 885 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-208ENST00000601220 QKIQ96PU8 341 aaKnown RBP eCLIP17.59■□□□□ 0.41
CHMP2A-208ENST00000601220 RUFY1Q96T51 708 aa17.59■□□□□ 0.41
CHMP2A-208ENST00000601220 ZCCHC2Q9C0B9 1178 aaKnown RBP17.59■□□□□ 0.41
CHMP2A-208ENST00000601220 PDE7BQ9NP56 450 aa17.59■□□□□ 0.41
CHMP2A-208ENST00000601220 ANKMY1Q9P2S6 941 aa17.59■□□□□ 0.41
CHMP2A-208ENST00000601220 TLK1Q9UKI8 766 aa17.59■□□□□ 0.41
CHMP2A-208ENST00000601220 CDC14CA4D256 554 aa17.58■□□□□ 0.4
CHMP2A-208ENST00000601220 OR5K3A6NET4 321 aa17.58■□□□□ 0.4
CHMP2A-208ENST00000601220 C21orf140B9A014 251 aa17.58■□□□□ 0.4
CHMP2A-208ENST00000601220 SGTAO43765 313 aa17.58■□□□□ 0.4
CHMP2A-208ENST00000601220 AGTP01019 485 aa17.58■□□□□ 0.4
CHMP2A-208ENST00000601220 MT-ND3P03897 115 aa17.58■□□□□ 0.4
CHMP2A-208ENST00000601220 PDGFAP04085 211 aa17.58■□□□□ 0.4
CHMP2A-208ENST00000601220 EBLN1P0CF75 366 aa17.58■□□□□ 0.4
CHMP2A-208ENST00000601220 MTHFD1P11586 935 aaKnown RBP17.58■□□□□ 0.4
CHMP2A-208ENST00000601220 PMS2P54278 862 aa17.58■□□□□ 0.4
CHMP2A-208ENST00000601220 TUBB3Q13509 450 aa17.58■□□□□ 0.4
CHMP2A-208ENST00000601220 ITGA9Q13797 1035 aa17.58■□□□□ 0.4
CHMP2A-208ENST00000601220 BPHLQ86WA6 291 aaPredicted RBP17.58■□□□□ 0.4
CHMP2A-208ENST00000601220 KMT5CQ86Y97 462 aa17.58■□□□□ 0.4
CHMP2A-208ENST00000601220 RCOR2Q8IZ40 523 aa17.58■□□□□ 0.4
CHMP2A-208ENST00000601220 D2HGDHQ8N465 521 aa17.58■□□□□ 0.4
CHMP2A-208ENST00000601220 SIDT2Q8NBJ9 832 aaKnown RBP17.58■□□□□ 0.4
CHMP2A-208ENST00000601220 ZNF398Q8TD17 642 aa17.58■□□□□ 0.4
CHMP2A-208ENST00000601220 NAT14Q8WUY8 206 aa17.58■□□□□ 0.4
CHMP2A-208ENST00000601220 HAUS1Q96CS2 278 aa17.58■□□□□ 0.4
CHMP2A-208ENST00000601220 TWSG1Q9GZX9 223 aa17.58■□□□□ 0.4
CHMP2A-208ENST00000601220 C10orf88Q9H8K7 445 aa17.58■□□□□ 0.4
CHMP2A-208ENST00000601220 RARRES3Q9UL19 164 aa17.58■□□□□ 0.4
CHMP2A-208ENST00000601220 PLAAQ9Y263 795 aa17.58■□□□□ 0.4
CHMP2A-208ENST00000601220 ZNF106Q9H2Y7 1883 aaKnown RBP17.57■□□□□ 0.4
CHMP2A-208ENST00000601220 NBASA2RRP1 2371 aa17.57■□□□□ 0.4
CHMP2A-208ENST00000601220 PIPSLA2A3N6 862 aa17.57■□□□□ 0.4
CHMP2A-208ENST00000601220 MGAT4DA6NG13 374 aa17.57■□□□□ 0.4
CHMP2A-208ENST00000601220 HACD1B0YJ81 288 aa17.57■□□□□ 0.4
CHMP2A-208ENST00000601220 ZRANB2O95218 330 aaKnown RBP eCLIP17.57■□□□□ 0.4
CHMP2A-208ENST00000601220 NTRK1P04629 796 aa17.57■□□□□ 0.4
CHMP2A-208ENST00000601220 ADRA1AP35348 466 aa17.57■□□□□ 0.4
CHMP2A-208ENST00000601220 CD97P48960 835 aa17.57■□□□□ 0.4
CHMP2A-208ENST00000601220 XIAPP98170 497 aa17.57■□□□□ 0.4
CHMP2A-208ENST00000601220 FNBP1LQ5T0N5 605 aa17.57■□□□□ 0.4
CHMP2A-208ENST00000601220 FAM199XQ6PEV8 388 aaPredicted RBP17.57■□□□□ 0.4
CHMP2A-208ENST00000601220 KLHL35Q6PF15 583 aa17.57■□□□□ 0.4
CHMP2A-208ENST00000601220 RANBP10Q6VN20 620 aa17.57■□□□□ 0.4
CHMP2A-208ENST00000601220 ZNF517Q6ZMY9 492 aaPredicted RBP17.57■□□□□ 0.4
CHMP2A-208ENST00000601220 APLFQ8IW19 511 aaPredicted RBP17.57■□□□□ 0.4
CHMP2A-208ENST00000601220 SPDYE1Q8NFV5 336 aaPredicted RBP17.57■□□□□ 0.4
CHMP2A-208ENST00000601220 ZFPM2Q8WW38 1151 aa17.57■□□□□ 0.4
CHMP2A-208ENST00000601220 ZNF514Q96K75 400 aaPredicted RBP17.57■□□□□ 0.4
CHMP2A-208ENST00000601220 CD180Q99467 661 aa17.57■□□□□ 0.4
CHMP2A-208ENST00000601220 WWP1Q9H0M0 922 aa17.57■□□□□ 0.4
CHMP2A-208ENST00000601220 HRASLS2Q9NWW9 162 aa17.57■□□□□ 0.4
CHMP2A-208ENST00000601220 TRHDEQ9UKU6 1024 aa17.57■□□□□ 0.4
CHMP2A-208ENST00000601220 PKP3Q9Y446 797 aa17.57■□□□□ 0.4
CHMP2A-208ENST00000601220 ARL5AQ9Y689 179 aa17.57■□□□□ 0.4
CHMP2A-208ENST00000601220 CFAP20Q9Y6A4 193 aaKnown RBP17.57■□□□□ 0.4
CHMP2A-208ENST00000601220 TLCD2A6NGC4 264 aa17.56■□□□□ 0.4
CHMP2A-208ENST00000601220 AGAP14A8MT82 685 aa17.56■□□□□ 0.4
CHMP2A-208ENST00000601220 MKRN2OSH3BPM6 223 aa17.56■□□□□ 0.4
CHMP2A-208ENST00000601220 RFPL1O75677 317 aa17.56■□□□□ 0.4
CHMP2A-208ENST00000601220 RBL1P28749 1068 aa17.56■□□□□ 0.4
CHMP2A-208ENST00000601220 ACY1Q03154 408 aa17.56■□□□□ 0.4
CHMP2A-208ENST00000601220 SEMA5AQ13591 1074 aa17.56■□□□□ 0.4
CHMP2A-208ENST00000601220 DUS1LQ6P1R4 473 aaKnown RBP17.56■□□□□ 0.4
CHMP2A-208ENST00000601220 CYB5D1Q6P9G0 228 aa17.56■□□□□ 0.4
CHMP2A-208ENST00000601220 BBS12Q6ZW61 710 aa17.56■□□□□ 0.4
CHMP2A-208ENST00000601220 DET1Q7L5Y6 550 aa17.56■□□□□ 0.4
CHMP2A-208ENST00000601220 SLC38A9Q8NBW4 561 aa17.56■□□□□ 0.4
CHMP2A-208ENST00000601220 OR2L2Q8NH16 312 aa17.56■□□□□ 0.4
CHMP2A-208ENST00000601220 KRT35Q92764 455 aa17.56■□□□□ 0.4
CHMP2A-208ENST00000601220 ZNF501Q96CX3 271 aaPredicted RBP17.56■□□□□ 0.4
CHMP2A-208ENST00000601220 LINC00615Q96LM1 132 aaPredicted RBP17.56■□□□□ 0.4
CHMP2A-208ENST00000601220 PPM1MQ96MI6 270 aa17.56■□□□□ 0.4
CHMP2A-208ENST00000601220 GPR87Q9BY21 358 aa17.56■□□□□ 0.4
CHMP2A-208ENST00000601220 TRIM55Q9BYV6 548 aa17.56■□□□□ 0.4
CHMP2A-208ENST00000601220 ACTL8Q9H568 366 aa17.56■□□□□ 0.4
CHMP2A-208ENST00000601220 FGF21Q9NSA1 209 aa17.56■□□□□ 0.4
CHMP2A-208ENST00000601220 IMP3Q9NV31 184 aaKnown RBP17.56■□□□□ 0.4
CHMP2A-208ENST00000601220 RSPH14Q9UHP6 348 aa17.56■□□□□ 0.4
CHMP2A-208ENST00000601220 SLC24A2Q9UI40 661 aa17.56■□□□□ 0.4
CHMP2A-208ENST00000601220 ACSL5Q9ULC5 683 aa17.56■□□□□ 0.4
CHMP2A-208ENST00000601220 TFR2Q9UP52 801 aa17.56■□□□□ 0.4
CHMP2A-208ENST00000601220 NBPF19A0A087WUL8 3843 aa17.55■□□□□ 0.4
CHMP2A-208ENST00000601220 LRRK2Q5S007 2527 aa17.55■□□□□ 0.4
CHMP2A-208ENST00000601220 STX7O15400 261 aaKnown RBP17.55■□□□□ 0.4
CHMP2A-208ENST00000601220 DNAJB5O75953 348 aa17.55■□□□□ 0.4
CHMP2A-208ENST00000601220 LCA5LO95447 670 aa17.55■□□□□ 0.4
CHMP2A-208ENST00000601220 PRAMEF1O95521 474 aa17.55■□□□□ 0.4
CHMP2A-208ENST00000601220 TPM1P09493 284 aa17.55■□□□□ 0.4
CHMP2A-208ENST00000601220 MSH3P20585 1137 aa17.55■□□□□ 0.4
CHMP2A-208ENST00000601220 PTPN4P29074 926 aa17.55■□□□□ 0.4
CHMP2A-208ENST00000601220 PBLDP30039 288 aaPredicted RBP17.55■□□□□ 0.4
CHMP2A-208ENST00000601220 MAGEA1P43355 309 aa17.55■□□□□ 0.4
CHMP2A-208ENST00000601220 KPNA2P52292 529 aaKnown RBP17.55■□□□□ 0.4
CHMP2A-208ENST00000601220 TUBB4BP68371 445 aa17.55■□□□□ 0.4
CHMP2A-208ENST00000601220 HSD11B2P80365 405 aa17.55■□□□□ 0.4
CHMP2A-208ENST00000601220 XRCC4Q13426 336 aa17.55■□□□□ 0.4
CHMP2A-208ENST00000601220 OLIG2Q13516 323 aa17.55■□□□□ 0.4
CHMP2A-208ENST00000601220 TUBB2AQ13885 445 aa17.55■□□□□ 0.4
CHMP2A-208ENST00000601220 TAF1AQ15573 450 aaPredicted RBP17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms