RNA–Protein interactions for RNA: ENST00000601038.5

SCAF1-204, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 491 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-204ENST00000601038 CASRP41180 1078 aa16.62■□□□□ 0.25
SCAF1-204ENST00000601038 ATP5OP48047 213 aa16.62■□□□□ 0.25
SCAF1-204ENST00000601038 PPP1CAP62136 330 aa16.62■□□□□ 0.25
SCAF1-204ENST00000601038 PTPRCAPQ14761 206 aa16.62■□□□□ 0.25
SCAF1-204ENST00000601038 SPA17Q15506 151 aa16.62■□□□□ 0.25
SCAF1-204ENST00000601038 TAF1AQ15573 450 aaPredicted RBP16.62■□□□□ 0.25
SCAF1-204ENST00000601038 SKIDA1Q1XH10 827 aa16.62■□□□□ 0.25
SCAF1-204ENST00000601038 FNBP1LQ5T0N5 605 aa16.62■□□□□ 0.25
SCAF1-204ENST00000601038 ITPRIPL1Q6GPH6 555 aa16.62■□□□□ 0.25
SCAF1-204ENST00000601038 RANBP10Q6VN20 620 aa16.62■□□□□ 0.25
SCAF1-204ENST00000601038 DAAM2Q86T65 1068 aa16.62■□□□□ 0.25
SCAF1-204ENST00000601038 BPHLQ86WA6 291 aaPredicted RBP16.62■□□□□ 0.25
SCAF1-204ENST00000601038 BEND7Q8N7W2 519 aaPredicted RBP16.62■□□□□ 0.25
SCAF1-204ENST00000601038 SIDT2Q8NBJ9 832 aaKnown RBP16.62■□□□□ 0.25
SCAF1-204ENST00000601038 ZFPM2Q8WW38 1151 aa16.62■□□□□ 0.25
SCAF1-204ENST00000601038 RNF31Q96EP0 1072 aa16.62■□□□□ 0.25
SCAF1-204ENST00000601038 FERMT1Q9BQL6 677 aa16.62■□□□□ 0.25
SCAF1-204ENST00000601038 C10orf88Q9H8K7 445 aa16.62■□□□□ 0.25
SCAF1-204ENST00000601038 LUC7LQ9NQ29 371 aaKnown RBP16.62■□□□□ 0.25
SCAF1-204ENST00000601038 ZNF71Q9NQZ8 489 aaPredicted RBP16.62■□□□□ 0.25
SCAF1-204ENST00000601038 LNPEPQ9UIQ6 1025 aa16.62■□□□□ 0.25
SCAF1-204ENST00000601038 RARRES3Q9UL19 164 aa16.62■□□□□ 0.25
SCAF1-204ENST00000601038 TFR2Q9UP52 801 aa16.62■□□□□ 0.25
SCAF1-204ENST00000601038 EFR3BQ9Y2G0 817 aa16.62■□□□□ 0.25
SCAF1-204ENST00000601038 PCDHGA6Q9Y5G7 932 aa16.62■□□□□ 0.25
SCAF1-204ENST00000601038 ARL5AQ9Y689 179 aa16.62■□□□□ 0.25
SCAF1-204ENST00000601038 KCNMB2Q9Y691 235 aa16.62■□□□□ 0.25
SCAF1-204ENST00000601038 RECKO95980 971 aa16.61■□□□□ 0.25
SCAF1-204ENST00000601038 MTHFD1P11586 935 aaKnown RBP16.61■□□□□ 0.25
SCAF1-204ENST00000601038 FOLR1P15328 257 aa16.61■□□□□ 0.25
SCAF1-204ENST00000601038 PBLDP30039 288 aaPredicted RBP16.61■□□□□ 0.25
SCAF1-204ENST00000601038 AKT1P31749 480 aa16.61■□□□□ 0.25
SCAF1-204ENST00000601038 ADRA1AP35348 466 aa16.61■□□□□ 0.25
SCAF1-204ENST00000601038 ERV3-1Q14264 604 aa16.61■□□□□ 0.25
SCAF1-204ENST00000601038 PLCL1Q15111 1095 aa16.61■□□□□ 0.25
SCAF1-204ENST00000601038 CCDC181Q5TID7 509 aa16.61■□□□□ 0.25
SCAF1-204ENST00000601038 SARM1Q6SZW1 724 aa16.61■□□□□ 0.25
SCAF1-204ENST00000601038 KMT5CQ86Y97 462 aa16.61■□□□□ 0.25
SCAF1-204ENST00000601038 OR4K2Q8NGD2 314 aa16.61■□□□□ 0.25
SCAF1-204ENST00000601038 OR2L2Q8NH16 312 aa16.61■□□□□ 0.25
SCAF1-204ENST00000601038 INSM2Q96T92 566 aaPredicted RBP16.61■□□□□ 0.25
SCAF1-204ENST00000601038 CD180Q99467 661 aa16.61■□□□□ 0.25
SCAF1-204ENST00000601038 MAP3K3Q99759 626 aa16.61■□□□□ 0.25
SCAF1-204ENST00000601038 GORASP1Q9BQQ3 440 aa16.61■□□□□ 0.25
SCAF1-204ENST00000601038 FICDQ9BVA6 458 aa16.61■□□□□ 0.25
SCAF1-204ENST00000601038 TRIM5Q9C035 493 aa16.61■□□□□ 0.25
SCAF1-204ENST00000601038 EPN3Q9H201 632 aa16.61■□□□□ 0.25
SCAF1-204ENST00000601038 LHX9Q9NQ69 397 aa16.61■□□□□ 0.25
SCAF1-204ENST00000601038 IMP3Q9NV31 184 aaKnown RBP16.61■□□□□ 0.25
SCAF1-204ENST00000601038 ACSL5Q9ULC5 683 aa16.61■□□□□ 0.25
SCAF1-204ENST00000601038 AAR2Q9Y312 384 aaKnown RBP16.61■□□□□ 0.25
SCAF1-204ENST00000601038 OR5K3A6NET4 321 aa16.6■□□□□ 0.25
SCAF1-204ENST00000601038 KATNA1O75449 491 aa16.6■□□□□ 0.25
SCAF1-204ENST00000601038 SRP72O76094 671 aaKnown RBP16.6■□□□□ 0.25
SCAF1-204ENST00000601038 CTNNA1P35221 906 aaKnown RBP16.6■□□□□ 0.25
SCAF1-204ENST00000601038 ACY1Q03154 408 aa16.6■□□□□ 0.25
SCAF1-204ENST00000601038 TUBB3Q13509 450 aa16.6■□□□□ 0.25
SCAF1-204ENST00000601038 PWWP2BQ6NUJ5 590 aa16.6■□□□□ 0.25
SCAF1-204ENST00000601038 DET1Q7L5Y6 550 aa16.6■□□□□ 0.25
SCAF1-204ENST00000601038 ACTL9Q8TC94 416 aa16.6■□□□□ 0.25
SCAF1-204ENST00000601038 CALR3Q96L12 384 aaKnown RBP16.6■□□□□ 0.25
SCAF1-204ENST00000601038 LINC00615Q96LM1 132 aaPredicted RBP16.6■□□□□ 0.25
SCAF1-204ENST00000601038 WWP1Q9H0M0 922 aa16.6■□□□□ 0.25
SCAF1-204ENST00000601038 ASB8Q9H765 288 aa16.6■□□□□ 0.25
SCAF1-204ENST00000601038 HRASLS2Q9NWW9 162 aa16.6■□□□□ 0.25
SCAF1-204ENST00000601038 POLHQ9Y253 713 aa16.6■□□□□ 0.25
SCAF1-204ENST00000601038 PCDHA3Q9Y5H8 950 aa16.6■□□□□ 0.25
SCAF1-204ENST00000601038 CFAP20Q9Y6A4 193 aaKnown RBP16.6■□□□□ 0.25
SCAF1-204ENST00000601038 UBA6A0AVT1 1052 aaPredicted RBP16.59■□□□□ 0.25
SCAF1-204ENST00000601038 TLCD2A6NGC4 264 aa16.59■□□□□ 0.25
SCAF1-204ENST00000601038 AGAP14A8MT82 685 aa16.59■□□□□ 0.25
SCAF1-204ENST00000601038 C21orf140B9A014 251 aa16.59■□□□□ 0.25
SCAF1-204ENST00000601038 CREG1O75629 220 aa16.59■□□□□ 0.25
SCAF1-204ENST00000601038 TIAF1O95411 115 aa16.59■□□□□ 0.25
SCAF1-204ENST00000601038 FURINP09958 794 aa16.59■□□□□ 0.25
SCAF1-204ENST00000601038 PYGMP11217 842 aa16.59■□□□□ 0.25
SCAF1-204ENST00000601038 CYLC1P35663 651 aaPredicted RBP16.59■□□□□ 0.25
SCAF1-204ENST00000601038 ARL4DP49703 201 aa16.59■□□□□ 0.25
SCAF1-204ENST00000601038 HSD11B2P80365 405 aa16.59■□□□□ 0.25
SCAF1-204ENST00000601038 PDE1BQ01064 536 aa16.59■□□□□ 0.25
SCAF1-204ENST00000601038 OTUD4Q01804 1114 aaKnown RBP16.59■□□□□ 0.25
SCAF1-204ENST00000601038 MSLNQ13421 630 aaPredicted RBP16.59■□□□□ 0.25
SCAF1-204ENST00000601038 DNASE1L3Q13609 305 aa16.59■□□□□ 0.25
SCAF1-204ENST00000601038 PRPSAP1Q14558 356 aa16.59■□□□□ 0.25
SCAF1-204ENST00000601038 KCNAB1Q14722 419 aa16.59■□□□□ 0.25
SCAF1-204ENST00000601038 BCL7AQ4VC05 210 aa16.59■□□□□ 0.25
SCAF1-204ENST00000601038 LACTB2Q53H82 288 aaPredicted RBP16.59■□□□□ 0.25
SCAF1-204ENST00000601038 DNTTIP2Q5QJE6 756 aaKnown RBP16.59■□□□□ 0.25
SCAF1-204ENST00000601038 ANKRD20A2Q5SQ80 823 aa16.59■□□□□ 0.25
SCAF1-204ENST00000601038 ANKRD20A1Q5TYW2 823 aa16.59■□□□□ 0.25
SCAF1-204ENST00000601038 ANKRD20A3Q5VUR7 823 aa16.59■□□□□ 0.25
SCAF1-204ENST00000601038 CDKL3Q8IVW4 592 aaPredicted RBP16.59■□□□□ 0.25
SCAF1-204ENST00000601038 D2HGDHQ8N465 521 aa16.59■□□□□ 0.25
SCAF1-204ENST00000601038 C12orf66Q96MD2 445 aa16.59■□□□□ 0.25
SCAF1-204ENST00000601038 C19orf43Q9BQ61 176 aa16.59■□□□□ 0.25
SCAF1-204ENST00000601038 APOL2Q9BQE5 337 aa16.59■□□□□ 0.25
SCAF1-204ENST00000601038 KIR3DX1Q9H7L2 352 aa16.59■□□□□ 0.25
SCAF1-204ENST00000601038 FGF21Q9NSA1 209 aa16.59■□□□□ 0.25
SCAF1-204ENST00000601038 SLC24A2Q9UI40 661 aa16.59■□□□□ 0.25
SCAF1-204ENST00000601038 FKBPLQ9UIM3 349 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms