RNA–Protein interactions for RNA: ENST00000600284.5

VRK3-221, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 768 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-221ENST00000600284 OR2L2Q8NH16 312 aa15.48■□□□□ 0.07
VRK3-221ENST00000600284 RSC1A1Q92681 617 aa15.48■□□□□ 0.07
VRK3-221ENST00000600284 CATSPER2Q96P56 530 aa15.48■□□□□ 0.07
VRK3-221ENST00000600284 FAM118BQ9BPY3 351 aa15.48■□□□□ 0.07
VRK3-221ENST00000600284 TBL1YQ9BQ87 522 aa15.48■□□□□ 0.07
VRK3-221ENST00000600284 APOL2Q9BQE5 337 aa15.48■□□□□ 0.07
VRK3-221ENST00000600284 FKBPLQ9UIM3 349 aa15.48■□□□□ 0.07
VRK3-221ENST00000600284 CFAP46Q8IYW2 2715 aa15.47■□□□□ 0.07
VRK3-221ENST00000600284 RASSF9O75901 435 aa15.47■□□□□ 0.07
VRK3-221ENST00000600284 PTMAP06454 111 aaKnown RBP15.47■□□□□ 0.07
VRK3-221ENST00000600284 LEPRP48357 1165 aaKnown RBP15.47■□□□□ 0.07
VRK3-221ENST00000600284 ZNF140P52738 457 aaPredicted RBP15.47■□□□□ 0.07
VRK3-221ENST00000600284 CYP4F2P78329 520 aa15.47■□□□□ 0.07
VRK3-221ENST00000600284 FOXM1Q08050 763 aa15.47■□□□□ 0.07
VRK3-221ENST00000600284 CACHD1Q5VU97 1274 aa15.47■□□□□ 0.07
VRK3-221ENST00000600284 KCTD11Q693B1 232 aa15.47■□□□□ 0.07
VRK3-221ENST00000600284 TIPARPQ7Z3E1 657 aaKnown RBP15.47■□□□□ 0.07
VRK3-221ENST00000600284 SNX20Q7Z614 316 aa15.47■□□□□ 0.07
VRK3-221ENST00000600284 GAS2L3Q86XJ1 694 aa15.47■□□□□ 0.07
VRK3-221ENST00000600284 UBXN4Q92575 508 aa15.47■□□□□ 0.07
VRK3-221ENST00000600284 DCUN1D1Q96GG9 259 aa15.47■□□□□ 0.07
VRK3-221ENST00000600284 ADNPQ9H2P0 1102 aa15.47■□□□□ 0.07
VRK3-221ENST00000600284 GPN2Q9H9Y4 310 aaPredicted RBP15.47■□□□□ 0.07
VRK3-221ENST00000600284 KCTD3Q9Y597 815 aa15.47■□□□□ 0.07
VRK3-221ENST00000600284 LOC101059948A0A1B0GTJ6 334 aa15.46■□□□□ 0.07
VRK3-221ENST00000600284 C17orf113A0A1B0GUU1 675 aa15.46■□□□□ 0.07
VRK3-221ENST00000600284 CFAP99D6REC4 459 aa15.46■□□□□ 0.07
VRK3-221ENST00000600284 J3QKU1 62 aa15.46■□□□□ 0.07
VRK3-221ENST00000600284 PSMD3O43242 534 aa15.46■□□□□ 0.07
VRK3-221ENST00000600284 MTHFD1P11586 935 aaKnown RBP15.46■□□□□ 0.07
VRK3-221ENST00000600284 FGF5P12034 268 aa15.46■□□□□ 0.07
VRK3-221ENST00000600284 NELFEP18615 380 aaKnown RBP15.46■□□□□ 0.07
VRK3-221ENST00000600284 ITGALP20701 1170 aa15.46■□□□□ 0.07
VRK3-221ENST00000600284 CDC25BP30305 580 aa15.46■□□□□ 0.07
VRK3-221ENST00000600284 SEPHS1P49903 392 aa15.46■□□□□ 0.07
VRK3-221ENST00000600284 MC1RQ01726 317 aa15.46■□□□□ 0.07
VRK3-221ENST00000600284 KLF1Q13351 362 aaPredicted RBP15.46■□□□□ 0.07
VRK3-221ENST00000600284 OLIG2Q13516 323 aa15.46■□□□□ 0.07
VRK3-221ENST00000600284 GPR33Q49SQ1 333 aa15.46■□□□□ 0.07
VRK3-221ENST00000600284 CRTC2Q53ET0 693 aaPredicted RBP15.46■□□□□ 0.07
VRK3-221ENST00000600284 IRGCQ6NXR0 463 aa15.46■□□□□ 0.07
VRK3-221ENST00000600284 BORAQ6PGQ7 559 aa15.46■□□□□ 0.07
VRK3-221ENST00000600284 ARHGEF18Q6ZSZ5 1173 aa15.46■□□□□ 0.07
VRK3-221ENST00000600284 RNF10Q8N5U6 811 aaKnown RBP15.46■□□□□ 0.07
VRK3-221ENST00000600284 OR13C4Q8NGS5 318 aa15.46■□□□□ 0.07
VRK3-221ENST00000600284 COPS8Q99627 209 aa15.46■□□□□ 0.07
VRK3-221ENST00000600284 CCM2Q9BSQ5 444 aa15.46■□□□□ 0.07
VRK3-221ENST00000600284 STARD5Q9NSY2 213 aa15.46■□□□□ 0.07
VRK3-221ENST00000600284 GEMIN8Q9NWZ8 242 aaKnown RBP15.46■□□□□ 0.07
VRK3-221ENST00000600284 CRLS1Q9UJA2 301 aa15.46■□□□□ 0.07
VRK3-221ENST00000600284 PSMD13Q9UNM6 376 aa15.46■□□□□ 0.07
VRK3-221ENST00000600284 GCN1Q92616 2671 aaKnown RBP15.46■□□□□ 0.07
VRK3-221ENST00000600284 ZNF462Q96JM2 2506 aa15.45■□□□□ 0.06
VRK3-221ENST00000600284 HELZ2Q9BYK8 2649 aaKnown RBP15.45■□□□□ 0.06
VRK3-221ENST00000600284 GOLGA6L3A6NEY3 463 aa15.45■□□□□ 0.06
VRK3-221ENST00000600284 H7C0S8 307 aa15.45■□□□□ 0.06
VRK3-221ENST00000600284 DDX3YO15523 660 aaKnown RBP15.45■□□□□ 0.06
VRK3-221ENST00000600284 LDB2O43679 373 aa15.45■□□□□ 0.06
VRK3-221ENST00000600284 KIF1CO43896 1103 aaKnown RBP15.45■□□□□ 0.06
VRK3-221ENST00000600284 ATP1B2P14415 290 aaPredicted RBP15.45■□□□□ 0.06
VRK3-221ENST00000600284 ITGB6P18564 788 aa15.45■□□□□ 0.06
VRK3-221ENST00000600284 STAT5AP42229 794 aa15.45■□□□□ 0.06
VRK3-221ENST00000600284 PRLHRP49683 370 aa15.45■□□□□ 0.06
VRK3-221ENST00000600284 P3H1Q32P28 736 aa15.45■□□□□ 0.06
VRK3-221ENST00000600284 LARP7Q4G0J3 582 aaKnown RBP eCLIP15.45■□□□□ 0.06
VRK3-221ENST00000600284 DET1Q7L5Y6 550 aa15.45■□□□□ 0.06
VRK3-221ENST00000600284 BPHLQ86WA6 291 aaPredicted RBP15.45■□□□□ 0.06
VRK3-221ENST00000600284 KMT5CQ86Y97 462 aa15.45■□□□□ 0.06
VRK3-221ENST00000600284 CARFQ8N187 725 aa15.45■□□□□ 0.06
VRK3-221ENST00000600284 NXPE1Q8N323 547 aa15.45■□□□□ 0.06
VRK3-221ENST00000600284 FAM71DQ8N9W8 422 aa15.45■□□□□ 0.06
VRK3-221ENST00000600284 GPR150Q8NGU9 434 aa15.45■□□□□ 0.06
VRK3-221ENST00000600284 HES6Q96HZ4 224 aa15.45■□□□□ 0.06
VRK3-221ENST00000600284 SLC41A2Q96JW4 573 aa15.45■□□□□ 0.06
VRK3-221ENST00000600284 FCRL4Q96PJ5 515 aa15.45■□□□□ 0.06
VRK3-221ENST00000600284 OR6C1Q96RD1 312 aa15.45■□□□□ 0.06
VRK3-221ENST00000600284 INSM2Q96T92 566 aaPredicted RBP15.45■□□□□ 0.06
VRK3-221ENST00000600284 CD180Q99467 661 aa15.45■□□□□ 0.06
VRK3-221ENST00000600284 ULBP3Q9BZM4 244 aa15.45■□□□□ 0.06
VRK3-221ENST00000600284 WWP1Q9H0M0 922 aa15.45■□□□□ 0.06
VRK3-221ENST00000600284 LRRC40Q9H9A6 602 aa15.45■□□□□ 0.06
VRK3-221ENST00000600284 IMP3Q9NV31 184 aaKnown RBP15.45■□□□□ 0.06
VRK3-221ENST00000600284 COLEC10Q9Y6Z7 277 aa15.45■□□□□ 0.06
VRK3-221ENST00000600284 PIEZO2Q9H5I5 2752 aa15.44■□□□□ 0.06
VRK3-221ENST00000600284 TRBV5-4A0A0C4DH59 114 aa15.44■□□□□ 0.06
VRK3-221ENST00000600284 SGTAO43765 313 aa15.44■□□□□ 0.06
VRK3-221ENST00000600284 FAM87AP0C7U9 286 aa15.44■□□□□ 0.06
VRK3-221ENST00000600284 NDUFS1P28331 727 aa15.44■□□□□ 0.06
VRK3-221ENST00000600284 PBLDP30039 288 aaPredicted RBP15.44■□□□□ 0.06
VRK3-221ENST00000600284 STIP1P31948 543 aaKnown RBP15.44■□□□□ 0.06
VRK3-221ENST00000600284 SH3BP2P78314 561 aa15.44■□□□□ 0.06
VRK3-221ENST00000600284 SPARCL1Q14515 664 aa15.44■□□□□ 0.06
VRK3-221ENST00000600284 PLCL1Q15111 1095 aa15.44■□□□□ 0.06
VRK3-221ENST00000600284 CAPRIN2Q6IMN6 1127 aaKnown RBP15.44■□□□□ 0.06
VRK3-221ENST00000600284 C6orf15Q6UXA7 325 aaPredicted RBP15.44■□□□□ 0.06
VRK3-221ENST00000600284 FAM92BQ6ZTR7 304 aa15.44■□□□□ 0.06
VRK3-221ENST00000600284 PPP1R3BQ86XI6 285 aa15.44■□□□□ 0.06
VRK3-221ENST00000600284 RASGRP3Q8IV61 690 aa15.44■□□□□ 0.06
VRK3-221ENST00000600284 SLC35B2Q8TB61 432 aa15.44■□□□□ 0.06
VRK3-221ENST00000600284 HM13Q8TCT9 377 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms