RNA–Protein interactions for RNA: ENST00000600026.5

LTBP4-227, Transcript of latent transforming growth factor beta binding protein 4, human

TSL 3

Gene LTBP4, Length 723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LTBP4-227	ENST00000600026	TDRP	Q86YL5	185 aa		21.61	■■□□□ 1.05
LTBP4-227	ENST00000600026	RIBC1	Q8N443	379 aa	Predicted RBP	21.61	■■□□□ 1.05
LTBP4-227	ENST00000600026	CCL4L1	Q8NHW4	92 aa		21.61	■■□□□ 1.05
LTBP4-227	ENST00000600026	NAT14	Q8WUY8	206 aa		21.61	■■□□□ 1.05
LTBP4-227	ENST00000600026	DCAKD	Q8WVC6	231 aa		21.61	■■□□□ 1.05
LTBP4-227	ENST00000600026	DHRS4	Q9BTZ2	278 aa		21.61	■■□□□ 1.05
LTBP4-227	ENST00000600026	VIPAS39	Q9H9C1	493 aa		21.61	■■□□□ 1.05
LTBP4-227	ENST00000600026	GNPTG	Q9UJJ9	305 aa		21.61	■■□□□ 1.05
LTBP4-227	ENST00000600026	BTBD3	Q9Y2F9	522 aa		21.61	■■□□□ 1.05
LTBP4-227	ENST00000600026	PLEKHM1	Q9Y4G2	1056 aa		21.61	■■□□□ 1.05
LTBP4-227	ENST00000600026	COMMD10	Q9Y6G5	202 aa		21.61	■■□□□ 1.05
LTBP4-227	ENST00000600026	SMIM23	A6NLE4	172 aa		21.6	■■□□□ 1.05
LTBP4-227	ENST00000600026		H3BMM5	538 aa		21.6	■■□□□ 1.05
LTBP4-227	ENST00000600026	FFAR2	O15552	330 aa		21.6	■■□□□ 1.05
LTBP4-227	ENST00000600026	FLRT2	O43155	660 aa		21.6	■■□□□ 1.05
LTBP4-227	ENST00000600026	CDH16	O75309	829 aa		21.6	■■□□□ 1.05
LTBP4-227	ENST00000600026	FAM155B	O75949	473 aa		21.6	■■□□□ 1.05
LTBP4-227	ENST00000600026	AP2A2	O94973	939 aa		21.6	■■□□□ 1.05
LTBP4-227	ENST00000600026	ESR1	P03372	595 aa		21.6	■■□□□ 1.05
LTBP4-227	ENST00000600026	OR56A5	P0C7T3	313 aa		21.6	■■□□□ 1.05
LTBP4-227	ENST00000600026	GIMD1	P0DJR0	217 aa		21.6	■■□□□ 1.05
LTBP4-227	ENST00000600026	SLCO1A2	P46721	670 aa		21.6	■■□□□ 1.05
LTBP4-227	ENST00000600026	LIMK2	P53671	638 aa		21.6	■■□□□ 1.05
LTBP4-227	ENST00000600026	ELOC	Q15369	112 aa		21.6	■■□□□ 1.05
LTBP4-227	ENST00000600026	PLA2G4E	Q3MJ16	856 aa		21.6	■■□□□ 1.05
LTBP4-227	ENST00000600026	KRT71	Q3SY84	523 aa		21.6	■■□□□ 1.05
LTBP4-227	ENST00000600026	PTRHD1	Q6GMV3	140 aa	Known RBP	21.6	■■□□□ 1.05
LTBP4-227	ENST00000600026	TRAPPC5	Q8IUR0	188 aa		21.6	■■□□□ 1.05
LTBP4-227	ENST00000600026	ZNF547	Q8IVP9	402 aa		21.6	■■□□□ 1.05
LTBP4-227	ENST00000600026	EPS8L3	Q8TE67	593 aa	Known RBP	21.6	■■□□□ 1.05
LTBP4-227	ENST00000600026	ATXN7L3B	Q96GX2	97 aa		21.6	■■□□□ 1.05
LTBP4-227	ENST00000600026	VPS39	Q96JC1	886 aa		21.6	■■□□□ 1.05
LTBP4-227	ENST00000600026	ZNF514	Q96K75	400 aa	Predicted RBP	21.6	■■□□□ 1.05
LTBP4-227	ENST00000600026	P2RY12	Q9H244	342 aa		21.6	■■□□□ 1.05
LTBP4-227	ENST00000600026	ACBD3	Q9H3P7	528 aa		21.6	■■□□□ 1.05
LTBP4-227	ENST00000600026	CSNK1G3	Q9Y6M4	447 aa		21.6	■■□□□ 1.05
LTBP4-227	ENST00000600026	COL5A1	P20908	1838 aa	Predicted RBP	21.59	■■□□□ 1.05
LTBP4-227	ENST00000600026	IQANK1	A0A1B0GTG1	560 aa		21.59	■■□□□ 1.05
LTBP4-227	ENST00000600026	OR2AG2	A6NM03	316 aa		21.59	■■□□□ 1.05
LTBP4-227	ENST00000600026	KMO	O15229	486 aa		21.59	■■□□□ 1.05
LTBP4-227	ENST00000600026	ACP5	P13686	325 aa		21.59	■■□□□ 1.05
LTBP4-227	ENST00000600026	PKM	P14618	531 aa	Known RBP	21.59	■■□□□ 1.05
LTBP4-227	ENST00000600026	GCA	P28676	217 aa		21.59	■■□□□ 1.05
LTBP4-227	ENST00000600026	GRK6	P43250	576 aa		21.59	■■□□□ 1.05
LTBP4-227	ENST00000600026	ABCG1	P45844	678 aa		21.59	■■□□□ 1.05
LTBP4-227	ENST00000600026	CTBS	Q01459	385 aa		21.59	■■□□□ 1.05
LTBP4-227	ENST00000600026	RASA2	Q15283	850 aa		21.59	■■□□□ 1.05
LTBP4-227	ENST00000600026	INAVA	Q3KP66	663 aa		21.59	■■□□□ 1.05
LTBP4-227	ENST00000600026	CEP85L	Q5SZL2	805 aa		21.59	■■□□□ 1.05
LTBP4-227	ENST00000600026	TMEM220	Q6QAJ8	160 aa		21.59	■■□□□ 1.05
LTBP4-227	ENST00000600026	CHST15	Q7LFX5	561 aa	Predicted RBP	21.59	■■□□□ 1.05
LTBP4-227	ENST00000600026	GKN2	Q86XP6	184 aa		21.59	■■□□□ 1.05
LTBP4-227	ENST00000600026	NRROS	Q86YC3	692 aa		21.59	■■□□□ 1.05
LTBP4-227	ENST00000600026	NAXD	Q8IW45	347 aa		21.59	■■□□□ 1.05
LTBP4-227	ENST00000600026	GPATCH11	Q8N954	259 aa		21.59	■■□□□ 1.05
LTBP4-227	ENST00000600026	GPBAR1	Q8TDU6	330 aa		21.59	■■□□□ 1.05
LTBP4-227	ENST00000600026	TSSK1B	Q9BXA7	367 aa		21.59	■■□□□ 1.05
LTBP4-227	ENST00000600026	GSDMC	Q9BYG8	508 aa		21.59	■■□□□ 1.05
LTBP4-227	ENST00000600026	CDV3	Q9UKY7	258 aa	Known RBP	21.59	■■□□□ 1.05
LTBP4-227	ENST00000600026	ST14	Q9Y5Y6	855 aa		21.59	■■□□□ 1.05
LTBP4-227	ENST00000600026	FAM95C	A0A1B0GW59	222 aa		21.58	■■□□□ 1.05
LTBP4-227	ENST00000600026	NEMP2	A6NFY4	417 aa		21.58	■■□□□ 1.05
LTBP4-227	ENST00000600026	LMO7DN	F2Z398	122 aa		21.58	■■□□□ 1.05
LTBP4-227	ENST00000600026	SLC30A4	O14863	429 aa		21.58	■■□□□ 1.05
LTBP4-227	ENST00000600026	SGTA	O43765	313 aa		21.58	■■□□□ 1.05
LTBP4-227	ENST00000600026	SH3BP5	O60239	455 aa		21.58	■■□□□ 1.05
LTBP4-227	ENST00000600026	ANXA6	P08133	673 aa		21.58	■■□□□ 1.05
LTBP4-227	ENST00000600026	ITGA2B	P08514	1039 aa		21.58	■■□□□ 1.05
LTBP4-227	ENST00000600026	SNRPA	P09012	282 aa	Known RBP	21.58	■■□□□ 1.05
LTBP4-227	ENST00000600026	AK4	P27144	223 aa	Predicted RBP	21.58	■■□□□ 1.05
LTBP4-227	ENST00000600026	ZNF844	Q08AG5	666 aa		21.58	■■□□□ 1.05
LTBP4-227	ENST00000600026	ILF3	Q12906	894 aa	Known RBP eCLIP	21.58	■■□□□ 1.05
LTBP4-227	ENST00000600026	DEFB133	Q30KQ1	61 aa		21.58	■■□□□ 1.05
LTBP4-227	ENST00000600026	BCL7A	Q4VC05	210 aa		21.58	■■□□□ 1.05
LTBP4-227	ENST00000600026	FAM45BP	Q6NSW5	357 aa		21.58	■■□□□ 1.05
LTBP4-227	ENST00000600026	TAF8	Q7Z7C8	310 aa		21.58	■■□□□ 1.05
LTBP4-227	ENST00000600026	CLDN19	Q8N6F1	224 aa		21.58	■■□□□ 1.05
LTBP4-227	ENST00000600026	EID2	Q8N6I1	236 aa		21.58	■■□□□ 1.05
LTBP4-227	ENST00000600026	FAM45A	Q8TCE6	357 aa		21.58	■■□□□ 1.05
LTBP4-227	ENST00000600026	SETD7	Q8WTS6	366 aa	Known RBP	21.58	■■□□□ 1.05
LTBP4-227	ENST00000600026	SGF29	Q96ES7	293 aa		21.58	■■□□□ 1.05
LTBP4-227	ENST00000600026	ELMO2	Q96JJ3	720 aa		21.58	■■□□□ 1.05
LTBP4-227	ENST00000600026	BIRC8	Q96P09	236 aa		21.58	■■□□□ 1.05
LTBP4-227	ENST00000600026	MCMBP	Q9BTE3	642 aa		21.58	■■□□□ 1.05
LTBP4-227	ENST00000600026	AARSD1	Q9BTE6	412 aa	Known RBP	21.58	■■□□□ 1.05
LTBP4-227	ENST00000600026	NLGN3	Q9NZ94	848 aa		21.58	■■□□□ 1.05
LTBP4-227	ENST00000600026	GPR34	Q9UPC5	381 aa		21.58	■■□□□ 1.05
LTBP4-227	ENST00000600026	DOLK	Q9UPQ8	538 aa		21.58	■■□□□ 1.05
LTBP4-227	ENST00000600026	PRSS21	Q9Y6M0	314 aa		21.58	■■□□□ 1.05
LTBP4-227	ENST00000600026	WDR87	Q6ZQQ6	2873 aa		21.58	■■□□□ 1.05
LTBP4-227	ENST00000600026	ARID1B	Q8NFD5	2236 aa	Predicted RBP	21.57	■■□□□ 1.04
LTBP4-227	ENST00000600026	GOLGA6L10	A6NI86	522 aa		21.57	■■□□□ 1.04
LTBP4-227	ENST00000600026	TRIM38	O00635	465 aa		21.57	■■□□□ 1.04
LTBP4-227	ENST00000600026	YY2	O15391	372 aa		21.57	■■□□□ 1.04
LTBP4-227	ENST00000600026	SLC12A2	P55011	1212 aa		21.57	■■□□□ 1.04
LTBP4-227	ENST00000600026	LRP8	Q14114	963 aa		21.57	■■□□□ 1.04
LTBP4-227	ENST00000600026	TMED2	Q15363	201 aa		21.57	■■□□□ 1.04
LTBP4-227	ENST00000600026	INSC	Q1MX18	579 aa		21.57	■■□□□ 1.04
LTBP4-227	ENST00000600026	RSPO4	Q2I0M5	234 aa	Predicted RBP	21.57	■■□□□ 1.04
LTBP4-227	ENST00000600026	MROH9	Q5TGP6	573 aa		21.57	■■□□□ 1.04

Retrieved 100 of 20,778 RNA–protein pairs in 91.2 ms