RNA–Protein interactions for RNA: ENST00000599699.2

SSBP4-206, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene SSBP4, Length 793 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-206ENST00000599699 SLC35G4P0C7Q5 338 aa27.62■■■□□ 2.01
SSBP4-206ENST00000599699 CSF2RBP32927 897 aa27.62■■■□□ 2.01
SSBP4-206ENST00000599699 NSG1P42857 185 aa27.62■■■□□ 2.01
SSBP4-206ENST00000599699 SQSTM1Q13501 440 aa27.62■■■□□ 2.01
SSBP4-206ENST00000599699 RPE65Q16518 533 aa27.62■■■□□ 2.01
SSBP4-206ENST00000599699 TBC1D25Q3MII6 688 aa27.62■■■□□ 2.01
SSBP4-206ENST00000599699 CASC4Q6P4E1 433 aa27.62■■■□□ 2.01
SSBP4-206ENST00000599699 ZNF574Q6ZN55 896 aaPredicted RBP27.62■■■□□ 2.01
SSBP4-206ENST00000599699 CREG2Q8IUH2 290 aa27.62■■■□□ 2.01
SSBP4-206ENST00000599699 OR4D9Q8NGE8 314 aa27.62■■■□□ 2.01
SSBP4-206ENST00000599699 HM13Q8TCT9 377 aa27.62■■■□□ 2.01
SSBP4-206ENST00000599699 CCDC74BQ96LY2 380 aa27.62■■■□□ 2.01
SSBP4-206ENST00000599699 UCK1Q9HA47 277 aa27.62■■■□□ 2.01
SSBP4-206ENST00000599699 IMP3Q9NV31 184 aaKnown RBP27.62■■■□□ 2.01
SSBP4-206ENST00000599699 LOXL2Q9Y4K0 774 aa27.62■■■□□ 2.01
SSBP4-206ENST00000599699 APC2O95996 2303 aa27.62■■■□□ 2.01
SSBP4-206ENST00000599699 DMXL2Q8TDJ6 3036 aa27.61■■■□□ 2.01
SSBP4-206ENST00000599699 PRAMEF33A0A0G2JMD5 474 aa27.61■■■□□ 2.01
SSBP4-206ENST00000599699 AP2A2O94973 939 aa27.61■■■□□ 2.01
SSBP4-206ENST00000599699 TNFSF15O95150 251 aa27.61■■■□□ 2.01
SSBP4-206ENST00000599699 JMJD7P0C870 316 aa27.61■■■□□ 2.01
SSBP4-206ENST00000599699 NMBRP28336 390 aa27.61■■■□□ 2.01
SSBP4-206ENST00000599699 PPARGP37231 505 aaPredicted RBP27.61■■■□□ 2.01
SSBP4-206ENST00000599699 PAFAH1B1P43034 410 aa27.61■■■□□ 2.01
SSBP4-206ENST00000599699 CFHR1Q03591 330 aa27.61■■■□□ 2.01
SSBP4-206ENST00000599699 CERS6Q6ZMG9 384 aa27.61■■■□□ 2.01
SSBP4-206ENST00000599699 KLHL7Q8IXQ5 586 aa27.61■■■□□ 2.01
SSBP4-206ENST00000599699 RBM12BQ8IXT5 1001 aaKnown RBP27.61■■■□□ 2.01
SSBP4-206ENST00000599699 FGF11Q92914 225 aa27.61■■■□□ 2.01
SSBP4-206ENST00000599699 ZNF578Q96N58 590 aaPredicted RBP27.61■■■□□ 2.01
SSBP4-206ENST00000599699 DCBLD2Q96PD2 775 aa27.61■■■□□ 2.01
SSBP4-206ENST00000599699 CMKLR1Q99788 373 aa27.61■■■□□ 2.01
SSBP4-206ENST00000599699 EPB41L1Q9H4G0 881 aa27.61■■■□□ 2.01
SSBP4-206ENST00000599699 SLC40A1Q9NP59 571 aa27.61■■■□□ 2.01
SSBP4-206ENST00000599699 THSD1Q9NS62 852 aa27.61■■■□□ 2.01
SSBP4-206ENST00000599699 CATSPERZQ9NTU4 200 aa27.61■■■□□ 2.01
SSBP4-206ENST00000599699 TMEM9Q9P0T7 183 aa27.61■■■□□ 2.01
SSBP4-206ENST00000599699 ASIC3Q9UHC3 531 aa27.61■■■□□ 2.01
SSBP4-206ENST00000599699 CFAP20Q9Y6A4 193 aaKnown RBP27.61■■■□□ 2.01
SSBP4-206ENST00000599699 DXOO77932 396 aaKnown RBP27.6■■■□□ 2.01
SSBP4-206ENST00000599699 TMEM63AO94886 807 aa27.6■■■□□ 2.01
SSBP4-206ENST00000599699 HGFP14210 728 aa27.6■■■□□ 2.01
SSBP4-206ENST00000599699 AMD1P17707 334 aa27.6■■■□□ 2.01
SSBP4-206ENST00000599699 LIMK2P53671 638 aa27.6■■■□□ 2.01
SSBP4-206ENST00000599699 GPR18Q14330 331 aa27.6■■■□□ 2.01
SSBP4-206ENST00000599699 AARS2Q5JTZ9 985 aaKnown RBP27.6■■■□□ 2.01
SSBP4-206ENST00000599699 SNAP47Q5SQN1 464 aa27.6■■■□□ 2.01
SSBP4-206ENST00000599699 TMEM71Q6P5X7 295 aa27.6■■■□□ 2.01
SSBP4-206ENST00000599699 ZNF449Q6P9G9 518 aa27.6■■■□□ 2.01
SSBP4-206ENST00000599699 CES3Q6UWW8 571 aa27.6■■■□□ 2.01
SSBP4-206ENST00000599699 LILRA3Q8N6C8 439 aaPredicted RBP27.6■■■□□ 2.01
SSBP4-206ENST00000599699 OTUD6BQ8N6M0 293 aa27.6■■■□□ 2.01
SSBP4-206ENST00000599699 RCBTB1Q8NDN9 531 aa27.6■■■□□ 2.01
SSBP4-206ENST00000599699 TMEM159Q96B96 161 aa27.6■■■□□ 2.01
SSBP4-206ENST00000599699 C12orf66Q96MD2 445 aa27.6■■■□□ 2.01
SSBP4-206ENST00000599699 SLC46A1Q96NT5 459 aa27.6■■■□□ 2.01
SSBP4-206ENST00000599699 KIFC1Q9BW19 673 aa27.6■■■□□ 2.01
SSBP4-206ENST00000599699 XAB2Q9HCS7 855 aaKnown RBP27.6■■■□□ 2.01
SSBP4-206ENST00000599699 KCND1Q9NSA2 647 aa27.6■■■□□ 2.01
SSBP4-206ENST00000599699 TREX1Q9NSU2 369 aa27.6■■■□□ 2.01
SSBP4-206ENST00000599699 SAMD15Q9P1V8 674 aa27.6■■■□□ 2.01
SSBP4-206ENST00000599699 PISDQ9UG56 409 aa27.6■■■□□ 2.01
SSBP4-206ENST00000599699 ACACAQ13085 2346 aa27.59■■■□□ 2.01
SSBP4-206ENST00000599699 C17orf113A0A1B0GUU1 675 aa27.59■■■□□ 2.01
SSBP4-206ENST00000599699 QSOX1O00391 747 aa27.59■■■□□ 2.01
SSBP4-206ENST00000599699 UBXN7O94888 489 aa27.59■■■□□ 2.01
SSBP4-206ENST00000599699 TYRP1P17643 537 aa27.59■■■□□ 2.01
SSBP4-206ENST00000599699 WDR74Q6RFH5 385 aaPredicted RBP27.59■■■□□ 2.01
SSBP4-206ENST00000599699 PACS1Q6VY07 963 aa27.59■■■□□ 2.01
SSBP4-206ENST00000599699 CAND1Q86VP6 1230 aaKnown RBP27.59■■■□□ 2.01
SSBP4-206ENST00000599699 MCUQ8NE86 351 aa27.59■■■□□ 2.01
SSBP4-206ENST00000599699 PRR11Q96HE9 360 aaPredicted RBP27.59■■■□□ 2.01
SSBP4-206ENST00000599699 MRM3Q9HC36 420 aaKnown RBP27.59■■■□□ 2.01
SSBP4-206ENST00000599699 PCYOX1Q9UHG3 505 aa27.59■■■□□ 2.01
SSBP4-206ENST00000599699 SOX13Q9UN79 622 aa27.59■■■□□ 2.01
SSBP4-206ENST00000599699 PRSS21Q9Y6M0 314 aa27.59■■■□□ 2.01
SSBP4-206ENST00000599699 ANKRD11Q6UB99 2663 aaPredicted RBP27.58■■■□□ 2.01
SSBP4-206ENST00000599699 CD3EAPO15446 510 aaKnown RBP27.58■■■□□ 2.01
SSBP4-206ENST00000599699 TLX3O43711 291 aaPredicted RBP27.58■■■□□ 2.01
SSBP4-206ENST00000599699 OR1I1O60431 355 aa27.58■■■□□ 2.01
SSBP4-206ENST00000599699 OR56A5P0C7T3 313 aa27.58■■■□□ 2.01
SSBP4-206ENST00000599699 MTHFD1P11586 935 aaKnown RBP27.58■■■□□ 2.01
SSBP4-206ENST00000599699 MLNP12872 115 aa27.58■■■□□ 2.01
SSBP4-206ENST00000599699 ERVPABLB-1P60509 514 aa27.58■■■□□ 2.01
SSBP4-206ENST00000599699 TRA2AQ13595 282 aaKnown RBP eCLIP27.58■■■□□ 2.01
SSBP4-206ENST00000599699 KRT33BQ14525 404 aa27.58■■■□□ 2.01
SSBP4-206ENST00000599699 C16orf72Q14CZ0 275 aa27.58■■■□□ 2.01
SSBP4-206ENST00000599699 JAMLQ86YT9 394 aa27.58■■■□□ 2.01
SSBP4-206ENST00000599699 PPIL6Q8IXY8 311 aa27.58■■■□□ 2.01
SSBP4-206ENST00000599699 SPDYE1Q8NFV5 336 aaPredicted RBP27.58■■■□□ 2.01
SSBP4-206ENST00000599699 GPR150Q8NGU9 434 aa27.58■■■□□ 2.01
SSBP4-206ENST00000599699 MFSD3Q96ES6 412 aa27.58■■■□□ 2.01
SSBP4-206ENST00000599699 SGSM3Q96HU1 749 aa27.58■■■□□ 2.01
SSBP4-206ENST00000599699 INSM2Q96T92 566 aaPredicted RBP27.58■■■□□ 2.01
SSBP4-206ENST00000599699 COG4Q9H9E3 785 aa27.58■■■□□ 2.01
SSBP4-206ENST00000599699 ASCL3Q9NQ33 180 aa27.58■■■□□ 2.01
SSBP4-206ENST00000599699 F8W8V4 182 aa27.57■■■□□ 2
SSBP4-206ENST00000599699 FTH1P02794 183 aa27.57■■■□□ 2
SSBP4-206ENST00000599699 THRAP10827 490 aa27.57■■■□□ 2
SSBP4-206ENST00000599699 CASQ1P31415 396 aa27.57■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms