RNA–Protein interactions for RNA: ENST00000598907.5

SHKBP1-218, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 738 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-218ENST00000598907 NFKB1P19838 968 aa13.71□□□□□ -0.21
SHKBP1-218ENST00000598907 CES1P23141 567 aa13.71□□□□□ -0.21
SHKBP1-218ENST00000598907 FDFT1P37268 417 aa13.71□□□□□ -0.21
SHKBP1-218ENST00000598907 MAPK9P45984 424 aa13.71□□□□□ -0.21
SHKBP1-218ENST00000598907 GNPDA1P46926 289 aa13.71□□□□□ -0.21
SHKBP1-218ENST00000598907 CCL11P51671 97 aa13.71□□□□□ -0.21
SHKBP1-218ENST00000598907 DRG2P55039 364 aaKnown RBP13.71□□□□□ -0.21
SHKBP1-218ENST00000598907 MAXP61244 160 aa13.71□□□□□ -0.21
SHKBP1-218ENST00000598907 RHOAP61586 193 aa13.71□□□□□ -0.21
SHKBP1-218ENST00000598907 FOXM1Q08050 763 aa13.71□□□□□ -0.21
SHKBP1-218ENST00000598907 PPP1R7Q15435 360 aa13.71□□□□□ -0.21
SHKBP1-218ENST00000598907 TRIP13Q15645 432 aaPredicted RBP13.71□□□□□ -0.21
SHKBP1-218ENST00000598907 SLC14A2Q15849 920 aa13.71□□□□□ -0.21
SHKBP1-218ENST00000598907 RALGPS1Q5JS13 557 aa13.71□□□□□ -0.21
SHKBP1-218ENST00000598907 DUPD1Q68J44 220 aa13.71□□□□□ -0.21
SHKBP1-218ENST00000598907 ITPRIPL1Q6GPH6 555 aa13.71□□□□□ -0.21
SHKBP1-218ENST00000598907 C6orf15Q6UXA7 325 aaPredicted RBP13.71□□□□□ -0.21
SHKBP1-218ENST00000598907 ARHGEF18Q6ZSZ5 1173 aa13.71□□□□□ -0.21
SHKBP1-218ENST00000598907 NAGSQ8N159 534 aa13.71□□□□□ -0.21
SHKBP1-218ENST00000598907 STAMBPL1Q96FJ0 436 aa13.71□□□□□ -0.21
SHKBP1-218ENST00000598907 GDAP1L1Q96MZ0 367 aa13.71□□□□□ -0.21
SHKBP1-218ENST00000598907 NUDCD1Q96RS6 583 aa13.71□□□□□ -0.21
SHKBP1-218ENST00000598907 DPYSL5Q9BPU6 564 aa13.71□□□□□ -0.21
SHKBP1-218ENST00000598907 POLR1EQ9GZS1 481 aaKnown RBP13.71□□□□□ -0.21
SHKBP1-218ENST00000598907 WDR26Q9H7D7 661 aa13.71□□□□□ -0.21
SHKBP1-218ENST00000598907 PCDH12Q9NPG4 1184 aa13.71□□□□□ -0.21
SHKBP1-218ENST00000598907 FBXO8Q9NRD0 319 aa13.71□□□□□ -0.21
SHKBP1-218ENST00000598907 HAUS2Q9NVX0 235 aa13.71□□□□□ -0.21
SHKBP1-218ENST00000598907 DMGDHQ9UI17 866 aaKnown RBP13.71□□□□□ -0.21
SHKBP1-218ENST00000598907 ARGFXA6NJG6 315 aa13.7□□□□□ -0.22
SHKBP1-218ENST00000598907 CREG1O75629 220 aa13.7□□□□□ -0.22
SHKBP1-218ENST00000598907 PSMB4P28070 264 aa13.7□□□□□ -0.22
SHKBP1-218ENST00000598907 MAGEA6P43360 314 aa13.7□□□□□ -0.22
SHKBP1-218ENST00000598907 DSC2Q02487 901 aa13.7□□□□□ -0.22
SHKBP1-218ENST00000598907 GPS1Q13098 491 aa13.7□□□□□ -0.22
SHKBP1-218ENST00000598907 ELOAQ14241 798 aaKnown RBP13.7□□□□□ -0.22
SHKBP1-218ENST00000598907 MAP7Q14244 749 aa13.7□□□□□ -0.22
SHKBP1-218ENST00000598907 KCTD11Q693B1 232 aa13.7□□□□□ -0.22
SHKBP1-218ENST00000598907 SLC6A19Q695T7 634 aa13.7□□□□□ -0.22
SHKBP1-218ENST00000598907 SRLQ86TD4 932 aa13.7□□□□□ -0.22
SHKBP1-218ENST00000598907 OR10G6Q8NH81 332 aa13.7□□□□□ -0.22
SHKBP1-218ENST00000598907 ELMO2Q96JJ3 720 aa13.7□□□□□ -0.22
SHKBP1-218ENST00000598907 EXOC2Q96KP1 924 aa13.7□□□□□ -0.22
SHKBP1-218ENST00000598907 RAB17Q9H0T7 212 aa13.7□□□□□ -0.22
SHKBP1-218ENST00000598907 ETNK1Q9HBU6 452 aa13.7□□□□□ -0.22
SHKBP1-218ENST00000598907 RSPH14Q9UHP6 348 aa13.7□□□□□ -0.22
SHKBP1-218ENST00000598907 PHTF1Q9UMS5 762 aa13.7□□□□□ -0.22
SHKBP1-218ENST00000598907 PCNX1Q96RV3 2341 aa13.7□□□□□ -0.22
SHKBP1-218ENST00000598907 MED13LQ71F56 2210 aa13.7□□□□□ -0.22
SHKBP1-218ENST00000598907 CCDC168Q8NDH2 2452 aa13.69□□□□□ -0.22
SHKBP1-218ENST00000598907 TRBV23OR9-2A0A075B6M9 112 aa13.69□□□□□ -0.22
SHKBP1-218ENST00000598907 TTC24A2A3L6 582 aaPredicted RBP13.69□□□□□ -0.22
SHKBP1-218ENST00000598907 ANKUB1A6NFN9 424 aa13.69□□□□□ -0.22
SHKBP1-218ENST00000598907 PRSS44E7EML9 344 aa13.69□□□□□ -0.22
SHKBP1-218ENST00000598907 DNALI1O14645 258 aaPredicted RBP13.69□□□□□ -0.22
SHKBP1-218ENST00000598907 TNFRSF10CO14798 259 aa13.69□□□□□ -0.22
SHKBP1-218ENST00000598907 TP73O15350 636 aa13.69□□□□□ -0.22
SHKBP1-218ENST00000598907 INSIG1O15503 277 aa13.69□□□□□ -0.22
SHKBP1-218ENST00000598907 HEXIM1O94992 359 aaKnown RBP13.69□□□□□ -0.22
SHKBP1-218ENST00000598907 CBX6O95503 412 aa13.69□□□□□ -0.22
SHKBP1-218ENST00000598907 IGSF6O95976 241 aa13.69□□□□□ -0.22
SHKBP1-218ENST00000598907 RPL21P46778 160 aaKnown RBP13.69□□□□□ -0.22
SHKBP1-218ENST00000598907 AP1S1P61966 158 aa13.69□□□□□ -0.22
SHKBP1-218ENST00000598907 GPLD1P80108 840 aa13.69□□□□□ -0.22
SHKBP1-218ENST00000598907 SLC7A5Q01650 507 aa13.69□□□□□ -0.22
SHKBP1-218ENST00000598907 RAD51Q06609 339 aa13.69□□□□□ -0.22
SHKBP1-218ENST00000598907 CDK18Q07002 472 aa13.69□□□□□ -0.22
SHKBP1-218ENST00000598907 DNASE1L3Q13609 305 aa13.69□□□□□ -0.22
SHKBP1-218ENST00000598907 TEX35Q5T0J7 233 aa13.69□□□□□ -0.22
SHKBP1-218ENST00000598907 ERAP2Q6P179 960 aa13.69□□□□□ -0.22
SHKBP1-218ENST00000598907 KDELC1Q6UW63 502 aa13.69□□□□□ -0.22
SHKBP1-218ENST00000598907 PELI3Q8N2H9 469 aa13.69□□□□□ -0.22
SHKBP1-218ENST00000598907 SPATA22Q8NHS9 363 aa13.69□□□□□ -0.22
SHKBP1-218ENST00000598907 LRRC45Q96CN5 670 aa13.69□□□□□ -0.22
SHKBP1-218ENST00000598907 OXNAD1Q96HP4 312 aaPredicted RBP13.69□□□□□ -0.22
SHKBP1-218ENST00000598907 PPP1R2P1Q96PQ5 205 aa13.69□□□□□ -0.22
SHKBP1-218ENST00000598907 SLC38A3Q99624 504 aa13.69□□□□□ -0.22
SHKBP1-218ENST00000598907 MLPHQ9BV36 600 aaPredicted RBP13.69□□□□□ -0.22
SHKBP1-218ENST00000598907 NOD2Q9HC29 1040 aa13.69□□□□□ -0.22
SHKBP1-218ENST00000598907 ACSS2Q9NR19 701 aa13.69□□□□□ -0.22
SHKBP1-218ENST00000598907 RAB6BQ9NRW1 208 aa13.69□□□□□ -0.22
SHKBP1-218ENST00000598907 ASF1BQ9NVP2 202 aa13.69□□□□□ -0.22
SHKBP1-218ENST00000598907 GRHL1Q9NZI5 618 aa13.69□□□□□ -0.22
SHKBP1-218ENST00000598907 ASIC3Q9UHC3 531 aa13.69□□□□□ -0.22
SHKBP1-218ENST00000598907 UTP11Q9Y3A2 253 aaKnown RBP13.69□□□□□ -0.22
SHKBP1-218ENST00000598907 A0A1B0GTL3 188 aa13.68□□□□□ -0.22
SHKBP1-218ENST00000598907 ERI2A8K979 691 aaKnown RBP13.68□□□□□ -0.22
SHKBP1-218ENST00000598907 PSMD3O43242 534 aa13.68□□□□□ -0.22
SHKBP1-218ENST00000598907 ANXA9O76027 345 aa13.68□□□□□ -0.22
SHKBP1-218ENST00000598907 RECQL5O94762 991 aaPredicted RBP13.68□□□□□ -0.22
SHKBP1-218ENST00000598907 SEC31AO94979 1220 aaKnown RBP13.68□□□□□ -0.22
SHKBP1-218ENST00000598907 MT-CYBP00156 380 aaPredicted RBP13.68□□□□□ -0.22
SHKBP1-218ENST00000598907 MMP12P39900 470 aa13.68□□□□□ -0.22
SHKBP1-218ENST00000598907 ADCY8P40145 1251 aa13.68□□□□□ -0.22
SHKBP1-218ENST00000598907 VPS41P49754 854 aa13.68□□□□□ -0.22
SHKBP1-218ENST00000598907 SCNN1BP51168 640 aa13.68□□□□□ -0.22
SHKBP1-218ENST00000598907 ITKQ08881 620 aa13.68□□□□□ -0.22
SHKBP1-218ENST00000598907 SQSTM1Q13501 440 aa13.68□□□□□ -0.22
SHKBP1-218ENST00000598907 KCNJ11Q14654 390 aa13.68□□□□□ -0.22
SHKBP1-218ENST00000598907 CFAP58Q5T655 872 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms