RNA–Protein interactions for RNA: ENST00000597136.1

TRIM28-207, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 1,552 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-207ENST00000597136 SMOXQ9NWM0 555 aa14.77□□□□□ -0.05
TRIM28-207ENST00000597136 TRNAU1APQ9NX07 287 aaKnown RBP14.77□□□□□ -0.05
TRIM28-207ENST00000597136 CRLS1Q9UJA2 301 aa14.77□□□□□ -0.05
TRIM28-207ENST00000597136 OR2AG2A6NM03 316 aa14.76□□□□□ -0.05
TRIM28-207ENST00000597136 GRID2O43424 1007 aa14.76□□□□□ -0.05
TRIM28-207ENST00000597136 VEGFDO43915 354 aa14.76□□□□□ -0.05
TRIM28-207ENST00000597136 HAUS5O94927 633 aa14.76□□□□□ -0.05
TRIM28-207ENST00000597136 ANXA6P08133 673 aa14.76□□□□□ -0.05
TRIM28-207ENST00000597136 INHBAP08476 426 aa14.76□□□□□ -0.05
TRIM28-207ENST00000597136 KCNA4P22459 653 aa14.76□□□□□ -0.05
TRIM28-207ENST00000597136 ACRV1P26436 265 aa14.76□□□□□ -0.05
TRIM28-207ENST00000597136 GP5P40197 560 aa14.76□□□□□ -0.05
TRIM28-207ENST00000597136 SLCO1A2P46721 670 aa14.76□□□□□ -0.05
TRIM28-207ENST00000597136 LEPRP48357 1165 aaKnown RBP14.76□□□□□ -0.05
TRIM28-207ENST00000597136 NOVA1P51513 510 aaKnown RBP14.76□□□□□ -0.05
TRIM28-207ENST00000597136 DNAJC3Q13217 504 aa14.76□□□□□ -0.05
TRIM28-207ENST00000597136 PUM1Q14671 1186 aaKnown RBP eCLIP14.76□□□□□ -0.05
TRIM28-207ENST00000597136 ELOCQ15369 112 aa14.76□□□□□ -0.05
TRIM28-207ENST00000597136 TRIP6Q15654 476 aaKnown RBP14.76□□□□□ -0.05
TRIM28-207ENST00000597136 DBN1Q16643 649 aa14.76□□□□□ -0.05
TRIM28-207ENST00000597136 PLA2G4EQ3MJ16 856 aa14.76□□□□□ -0.05
TRIM28-207ENST00000597136 LDLRAP1Q5SW96 308 aa14.76□□□□□ -0.05
TRIM28-207ENST00000597136 LYPLAL1Q5VWZ2 237 aa14.76□□□□□ -0.05
TRIM28-207ENST00000597136 SLC30A9Q6PML9 568 aa14.76□□□□□ -0.05
TRIM28-207ENST00000597136 ADGRD1Q6QNK2 874 aa14.76□□□□□ -0.05
TRIM28-207ENST00000597136 PACS1Q6VY07 963 aa14.76□□□□□ -0.05
TRIM28-207ENST00000597136 DET1Q7L5Y6 550 aa14.76□□□□□ -0.05
TRIM28-207ENST00000597136 C11orf96Q7Z7L8 435 aa14.76□□□□□ -0.05
TRIM28-207ENST00000597136 TDRPQ86YL5 185 aa14.76□□□□□ -0.05
TRIM28-207ENST00000597136 GALNT13Q8IUC8 556 aa14.76□□□□□ -0.05
TRIM28-207ENST00000597136 FSTL5Q8N475 847 aaPredicted RBP14.76□□□□□ -0.05
TRIM28-207ENST00000597136 ZBTB9Q96C00 473 aa14.76□□□□□ -0.05
TRIM28-207ENST00000597136 APOLD1Q96LR9 279 aa14.76□□□□□ -0.05
TRIM28-207ENST00000597136 OR2M4Q96R27 311 aa14.76□□□□□ -0.05
TRIM28-207ENST00000597136 FBXO6Q9NRD1 293 aaPredicted RBP14.76□□□□□ -0.05
TRIM28-207ENST00000597136 INTS10Q9NVR2 710 aaKnown RBP14.76□□□□□ -0.05
TRIM28-207ENST00000597136 NLGN3Q9NZ94 848 aa14.76□□□□□ -0.05
TRIM28-207ENST00000597136 TXNDC16Q9P2K2 825 aa14.76□□□□□ -0.05
TRIM28-207ENST00000597136 IKBKGQ9Y6K9 419 aa14.76□□□□□ -0.05
TRIM28-207ENST00000597136 NCOR2Q9Y618 2525 aa14.75□□□□□ -0.05
TRIM28-207ENST00000597136 LY6G6EA0A0G2JKS1 128 aa14.75□□□□□ -0.05
TRIM28-207ENST00000597136 TLDC2A0PJX2 215 aa14.75□□□□□ -0.05
TRIM28-207ENST00000597136 SMIM23A6NLE4 172 aa14.75□□□□□ -0.05
TRIM28-207ENST00000597136 SGTAO43765 313 aa14.75□□□□□ -0.05
TRIM28-207ENST00000597136 NDUFS3O75489 264 aa14.75□□□□□ -0.05
TRIM28-207ENST00000597136 LDOC1O95751 146 aaPredicted RBP14.75□□□□□ -0.05
TRIM28-207ENST00000597136 EML2O95834 649 aa14.75□□□□□ -0.05
TRIM28-207ENST00000597136 ACP5P13686 325 aa14.75□□□□□ -0.05
TRIM28-207ENST00000597136 PPARGP37231 505 aaPredicted RBP14.75□□□□□ -0.05
TRIM28-207ENST00000597136 CSE1LP55060 971 aaKnown RBP14.75□□□□□ -0.05
TRIM28-207ENST00000597136 PROX2Q3B8N5 592 aa14.75□□□□□ -0.05
TRIM28-207ENST00000597136 CEP85LQ5SZL2 805 aa14.75□□□□□ -0.05
TRIM28-207ENST00000597136 RNF187Q5TA31 235 aaPredicted RBP14.75□□□□□ -0.05
TRIM28-207ENST00000597136 GRTP1Q5TC63 336 aa14.75□□□□□ -0.05
TRIM28-207ENST00000597136 CNSTQ6PJW8 725 aa14.75□□□□□ -0.05
TRIM28-207ENST00000597136 TMEM220Q6QAJ8 160 aa14.75□□□□□ -0.05
TRIM28-207ENST00000597136 BEND7Q8N7W2 519 aaPredicted RBP14.75□□□□□ -0.05
TRIM28-207ENST00000597136 FAM46DQ8NEK8 389 aa14.75□□□□□ -0.05
TRIM28-207ENST00000597136 CNDP2Q96KP4 475 aaKnown RBP14.75□□□□□ -0.05
TRIM28-207ENST00000597136 TTC1Q99614 292 aa14.75□□□□□ -0.05
TRIM28-207ENST00000597136 SIRPGQ9P1W8 387 aa14.75□□□□□ -0.05
TRIM28-207ENST00000597136 PSMC3IPQ9P2W1 217 aaPredicted RBP14.75□□□□□ -0.05
TRIM28-207ENST00000597136 ZNF180Q9UJW8 692 aa14.75□□□□□ -0.05
TRIM28-207ENST00000597136 DOLKQ9UPQ8 538 aa14.75□□□□□ -0.05
TRIM28-207ENST00000597136 KCNK6Q9Y257 313 aa14.75□□□□□ -0.05
TRIM28-207ENST00000597136 VPS9D1Q9Y2B5 631 aa14.75□□□□□ -0.05
TRIM28-207ENST00000597136 U3KQA8 63 aa14.75□□□□□ -0.05
TRIM28-207ENST00000597136 IGLV3-16A0A075B6K0 115 aa14.74□□□□□ -0.05
TRIM28-207ENST00000597136 AGPSO00116 658 aa14.74□□□□□ -0.05
TRIM28-207ENST00000597136 TPP1O14773 563 aa14.74□□□□□ -0.05
TRIM28-207ENST00000597136 PFDN6O15212 129 aa14.74□□□□□ -0.05
TRIM28-207ENST00000597136 ATP8B1O43520 1251 aa14.74□□□□□ -0.05
TRIM28-207ENST00000597136 OR1I1O60431 355 aa14.74□□□□□ -0.05
TRIM28-207ENST00000597136 CDH16O75309 829 aa14.74□□□□□ -0.05
TRIM28-207ENST00000597136 CEACAM1P13688 526 aa14.74□□□□□ -0.05
TRIM28-207ENST00000597136 MSH3P20585 1137 aa14.74□□□□□ -0.05
TRIM28-207ENST00000597136 AKT1P31749 480 aa14.74□□□□□ -0.05
TRIM28-207ENST00000597136 ABCG1P45844 678 aa14.74□□□□□ -0.05
TRIM28-207ENST00000597136 CD151P48509 253 aa14.74□□□□□ -0.05
TRIM28-207ENST00000597136 RASA2Q15283 850 aa14.74□□□□□ -0.05
TRIM28-207ENST00000597136 KRT71Q3SY84 523 aa14.74□□□□□ -0.05
TRIM28-207ENST00000597136 SLCO6A1Q86UG4 719 aa14.74□□□□□ -0.05
TRIM28-207ENST00000597136 LRRTM4Q86VH4 590 aa14.74□□□□□ -0.05
TRIM28-207ENST00000597136 ZC3HC1Q86WB0 502 aaKnown RBP14.74□□□□□ -0.05
TRIM28-207ENST00000597136 GKN2Q86XP6 184 aa14.74□□□□□ -0.05
TRIM28-207ENST00000597136 CLDN19Q8N6F1 224 aa14.74□□□□□ -0.05
TRIM28-207ENST00000597136 PATE1Q8WXA2 126 aa14.74□□□□□ -0.05
TRIM28-207ENST00000597136 LPGAT1Q92604 370 aa14.74□□□□□ -0.05
TRIM28-207ENST00000597136 RUFY1Q96T51 708 aa14.74□□□□□ -0.05
TRIM28-207ENST00000597136 RBBP8Q99708 897 aa14.74□□□□□ -0.05
TRIM28-207ENST00000597136 RHOJQ9H4E5 214 aa14.74□□□□□ -0.05
TRIM28-207ENST00000597136 SLC32A1Q9H598 525 aa14.74□□□□□ -0.05
TRIM28-207ENST00000597136 RMI1Q9H9A7 625 aa14.74□□□□□ -0.05
TRIM28-207ENST00000597136 TOR4AQ9NXH8 423 aa14.74□□□□□ -0.05
TRIM28-207ENST00000597136 ZDHHC3Q9NYG2 299 aa14.74□□□□□ -0.05
TRIM28-207ENST00000597136 EURLQ9NYK6 297 aa14.74□□□□□ -0.05
TRIM28-207ENST00000597136 TAAR2Q9P1P5 351 aa14.74□□□□□ -0.05
TRIM28-207ENST00000597136 CTNNAL1Q9UBT7 734 aa14.74□□□□□ -0.05
TRIM28-207ENST00000597136 FTSJ1Q9UET6 329 aa14.74□□□□□ -0.05
TRIM28-207ENST00000597136 GPR34Q9UPC5 381 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms