RNA–Protein interactions for RNA: ENST00000596938.1

CCDC9-203, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 457 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-203ENST00000596938 FDFT1P37268 417 aa10.3□□□□□ -0.76
CCDC9-203ENST00000596938 TMPRSS15P98073 1019 aa10.3□□□□□ -0.76
CCDC9-203ENST00000596938 LAMB3Q13751 1172 aa10.3□□□□□ -0.76
CCDC9-203ENST00000596938 SKIDA1Q1XH10 827 aa10.3□□□□□ -0.76
CCDC9-203ENST00000596938 MANEAQ5SRI9 462 aa10.3□□□□□ -0.76
CCDC9-203ENST00000596938 CAPRIN2Q6IMN6 1127 aaKnown RBP10.3□□□□□ -0.76
CCDC9-203ENST00000596938 KLHL35Q6PF15 583 aa10.3□□□□□ -0.76
CCDC9-203ENST00000596938 DRICH1Q6PGQ1 229 aaPredicted RBP10.3□□□□□ -0.76
CCDC9-203ENST00000596938 PCSK4Q6UW60 755 aa10.3□□□□□ -0.76
CCDC9-203ENST00000596938 XKR5Q6UX68 686 aa10.3□□□□□ -0.76
CCDC9-203ENST00000596938 DET1Q7L5Y6 550 aa10.3□□□□□ -0.76
CCDC9-203ENST00000596938 FAM129CQ86XR2 697 aa10.3□□□□□ -0.76
CCDC9-203ENST00000596938 TRIM58Q8NG06 486 aa10.3□□□□□ -0.76
CCDC9-203ENST00000596938 C1orf54Q8WWF1 131 aa10.3□□□□□ -0.76
CCDC9-203ENST00000596938 KLHL6Q8WZ60 621 aa10.3□□□□□ -0.76
CCDC9-203ENST00000596938 NKD1Q969G9 470 aa10.3□□□□□ -0.76
CCDC9-203ENST00000596938 ZDHHC12Q96GR4 267 aa10.3□□□□□ -0.76
CCDC9-203ENST00000596938 DNAJC1Q96KC8 554 aaKnown RBP10.3□□□□□ -0.76
CCDC9-203ENST00000596938 ALS2CR12Q96Q35 445 aa10.3□□□□□ -0.76
CCDC9-203ENST00000596938 INSM2Q96T92 566 aaPredicted RBP10.3□□□□□ -0.76
CCDC9-203ENST00000596938 CCM2Q9BSQ5 444 aa10.3□□□□□ -0.76
CCDC9-203ENST00000596938 FAM96AQ9H5X1 160 aa10.3□□□□□ -0.76
CCDC9-203ENST00000596938 ETNK1Q9HBU6 452 aa10.3□□□□□ -0.76
CCDC9-203ENST00000596938 LZTFL1Q9NQ48 299 aa10.3□□□□□ -0.76
CCDC9-203ENST00000596938 ZDHHC3Q9NYG2 299 aa10.3□□□□□ -0.76
CCDC9-203ENST00000596938 SEMA5BQ9P283 1151 aa10.3□□□□□ -0.76
CCDC9-203ENST00000596938 PSMD13Q9UNM6 376 aa10.3□□□□□ -0.76
CCDC9-203ENST00000596938 ZKSCAN5Q9Y2L8 839 aa10.3□□□□□ -0.76
CCDC9-203ENST00000596938 GAS8O95995 478 aa10.29□□□□□ -0.76
CCDC9-203ENST00000596938 IFNB1P01574 187 aa10.29□□□□□ -0.76
CCDC9-203ENST00000596938 GSTM1P09488 218 aa10.29□□□□□ -0.76
CCDC9-203ENST00000596938 MTHFD1P11586 935 aaKnown RBP10.29□□□□□ -0.76
CCDC9-203ENST00000596938 ACRV1P26436 265 aa10.29□□□□□ -0.76
CCDC9-203ENST00000596938 CAPZBP47756 277 aa10.29□□□□□ -0.76
CCDC9-203ENST00000596938 PRLHRP49683 370 aa10.29□□□□□ -0.76
CCDC9-203ENST00000596938 ATP1A2P50993 1020 aa10.29□□□□□ -0.76
CCDC9-203ENST00000596938 GFERP55789 205 aa10.29□□□□□ -0.76
CCDC9-203ENST00000596938 GSTM4Q03013 218 aa10.29□□□□□ -0.76
CCDC9-203ENST00000596938 CACNG1Q06432 222 aa10.29□□□□□ -0.76
CCDC9-203ENST00000596938 CDH17Q12864 832 aa10.29□□□□□ -0.76
CCDC9-203ENST00000596938 SEMA5AQ13591 1074 aa10.29□□□□□ -0.76
CCDC9-203ENST00000596938 POU6F1Q14863 301 aa10.29□□□□□ -0.76
CCDC9-203ENST00000596938 SIX1Q15475 284 aaPredicted RBP10.29□□□□□ -0.76
CCDC9-203ENST00000596938 ANKS6Q68DC2 871 aa10.29□□□□□ -0.76
CCDC9-203ENST00000596938 CEACAM20Q6UY09 585 aa10.29□□□□□ -0.76
CCDC9-203ENST00000596938 C4orf22Q6V702 233 aa10.29□□□□□ -0.76
CCDC9-203ENST00000596938 PRSS42Q7Z5A4 293 aa10.29□□□□□ -0.76
CCDC9-203ENST00000596938 SERPINA9Q86WD7 417 aa10.29□□□□□ -0.76
CCDC9-203ENST00000596938 CFAP206Q8IYR0 622 aa10.29□□□□□ -0.76
CCDC9-203ENST00000596938 OR52K1Q8NGK4 314 aa10.29□□□□□ -0.76
CCDC9-203ENST00000596938 MAIP1Q8WWC4 291 aa10.29□□□□□ -0.76
CCDC9-203ENST00000596938 TTC9Q92623 222 aa10.29□□□□□ -0.76
CCDC9-203ENST00000596938 PMEPA1Q969W9 287 aa10.29□□□□□ -0.76
CCDC9-203ENST00000596938 TGM7Q96PF1 710 aa10.29□□□□□ -0.76
CCDC9-203ENST00000596938 RANBP9Q96S59 729 aa10.29□□□□□ -0.76
CCDC9-203ENST00000596938 TLR10Q9BXR5 811 aa10.29□□□□□ -0.76
CCDC9-203ENST00000596938 ZNF768Q9H5H4 540 aaKnown RBP10.29□□□□□ -0.76
CCDC9-203ENST00000596938 RAB6BQ9NRW1 208 aa10.29□□□□□ -0.76
CCDC9-203ENST00000596938 SIDT1Q9NXL6 827 aaKnown RBP10.29□□□□□ -0.76
CCDC9-203ENST00000596938 KLHL3Q9UH77 587 aa10.29□□□□□ -0.76
CCDC9-203ENST00000596938 PILRAQ9UKJ1 303 aa10.29□□□□□ -0.76
CCDC9-203ENST00000596938 RIMKLBQ9ULI2 386 aa10.29□□□□□ -0.76
CCDC9-203ENST00000596938 COLEC10Q9Y6Z7 277 aa10.29□□□□□ -0.76
CCDC9-203ENST00000596938 E7EVH7 732 aa10.28□□□□□ -0.76
CCDC9-203ENST00000596938 CCL22O00626 93 aa10.28□□□□□ -0.76
CCDC9-203ENST00000596938 POLR1CO15160 346 aaPredicted RBP10.28□□□□□ -0.76
CCDC9-203ENST00000596938 NRDCO43847 1150 aa10.28□□□□□ -0.76
CCDC9-203ENST00000596938 AP2A2O94973 939 aa10.28□□□□□ -0.76
CCDC9-203ENST00000596938 ADRA1DP25100 572 aa10.28□□□□□ -0.76
CCDC9-203ENST00000596938 MAP4P27816 1152 aaKnown RBP10.28□□□□□ -0.76
CCDC9-203ENST00000596938 NDUFS1P28331 727 aa10.28□□□□□ -0.76
CCDC9-203ENST00000596938 PBLDP30039 288 aaPredicted RBP10.28□□□□□ -0.76
CCDC9-203ENST00000596938 LEPRP48357 1165 aaKnown RBP10.28□□□□□ -0.76
CCDC9-203ENST00000596938 CD151P48509 253 aa10.28□□□□□ -0.76
CCDC9-203ENST00000596938 CDKN1CP49918 316 aaPredicted RBP10.28□□□□□ -0.76
CCDC9-203ENST00000596938 CCZ1BP86790 482 aa10.28□□□□□ -0.76
CCDC9-203ENST00000596938 CCZ1P86791 482 aaPredicted RBP10.28□□□□□ -0.76
CCDC9-203ENST00000596938 RPA4Q13156 261 aa10.28□□□□□ -0.76
CCDC9-203ENST00000596938 SNX1Q13596 522 aa10.28□□□□□ -0.76
CCDC9-203ENST00000596938 SEPT6Q14141 434 aa10.28□□□□□ -0.76
CCDC9-203ENST00000596938 IL11RAQ14626 422 aa10.28□□□□□ -0.76
CCDC9-203ENST00000596938 ZNF658BQ4V348 819 aaPredicted RBP10.28□□□□□ -0.76
CCDC9-203ENST00000596938 TAF1BQ53T94 588 aaPredicted RBP10.28□□□□□ -0.76
CCDC9-203ENST00000596938 ZRANB3Q5FWF4 1079 aa10.28□□□□□ -0.76
CCDC9-203ENST00000596938 CACHD1Q5VU97 1274 aa10.28□□□□□ -0.76
CCDC9-203ENST00000596938 TAS2R42Q7RTR8 314 aa10.28□□□□□ -0.76
CCDC9-203ENST00000596938 PIANPQ8IYJ0 282 aa10.28□□□□□ -0.76
CCDC9-203ENST00000596938 CACNA2D3Q8IZS8 1091 aa10.28□□□□□ -0.76
CCDC9-203ENST00000596938 TAB3Q8N5C8 712 aaPredicted RBP10.28□□□□□ -0.76
CCDC9-203ENST00000596938 CCDC89Q8N998 374 aa10.28□□□□□ -0.76
CCDC9-203ENST00000596938 DNAAF3Q8N9W5 541 aa10.28□□□□□ -0.76
CCDC9-203ENST00000596938 ZSCAN1Q8NBB4 408 aa10.28□□□□□ -0.76
CCDC9-203ENST00000596938 HM13Q8TCT9 377 aa10.28□□□□□ -0.76
CCDC9-203ENST00000596938 RSC1A1Q92681 617 aa10.28□□□□□ -0.76
CCDC9-203ENST00000596938 PEX13Q92968 403 aa10.28□□□□□ -0.76
CCDC9-203ENST00000596938 SGSM3Q96HU1 749 aa10.28□□□□□ -0.76
CCDC9-203ENST00000596938 WWP1Q9H0M0 922 aa10.28□□□□□ -0.76
CCDC9-203ENST00000596938 TRIT1Q9H3H1 467 aaKnown RBP10.28□□□□□ -0.76
CCDC9-203ENST00000596938 VPS37BQ9H9H4 285 aa10.28□□□□□ -0.76
CCDC9-203ENST00000596938 CASS4Q9NQ75 786 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms