RNA–Protein interactions for RNA: ENST00000596708.1

CHMP2A-202, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 3

Gene CHMP2A, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-202ENST00000596708 TRIM55Q9BYV6 548 aa10.33□□□□□ -0.76
CHMP2A-202ENST00000596708 ACSS2Q9NR19 701 aa10.33□□□□□ -0.76
CHMP2A-202ENST00000596708 FGF21Q9NSA1 209 aa10.33□□□□□ -0.76
CHMP2A-202ENST00000596708 IMP3Q9NV31 184 aaKnown RBP10.33□□□□□ -0.76
CHMP2A-202ENST00000596708 ZNHIT6Q9NWK9 470 aaKnown RBP10.33□□□□□ -0.76
CHMP2A-202ENST00000596708 HRASLS2Q9NWW9 162 aa10.33□□□□□ -0.76
CHMP2A-202ENST00000596708 DDX56Q9NY93 547 aaKnown RBP10.33□□□□□ -0.76
CHMP2A-202ENST00000596708 HACD3Q9P035 362 aa10.33□□□□□ -0.76
CHMP2A-202ENST00000596708 SEMA5BQ9P283 1151 aa10.33□□□□□ -0.76
CHMP2A-202ENST00000596708 KLHL8Q9P2G9 620 aaPredicted RBP10.33□□□□□ -0.76
CHMP2A-202ENST00000596708 SAE1Q9UBE0 346 aaPredicted RBP10.33□□□□□ -0.76
CHMP2A-202ENST00000596708 FARSAQ9Y285 508 aaKnown RBP10.33□□□□□ -0.76
CHMP2A-202ENST00000596708 PKP3Q9Y446 797 aa10.33□□□□□ -0.76
CHMP2A-202ENST00000596708 COL12A1Q99715 3063 aa10.33□□□□□ -0.76
CHMP2A-202ENST00000596708 NBPF19A0A087WUL8 3843 aa10.32□□□□□ -0.76
CHMP2A-202ENST00000596708 GLYATL1P3A0A0U1RQE8 302 aa10.32□□□□□ -0.76
CHMP2A-202ENST00000596708 LOC285095A0A1B0GVY8 99 aa10.32□□□□□ -0.76
CHMP2A-202ENST00000596708 SSU72P8A0A1W2PR75 194 aa10.32□□□□□ -0.76
CHMP2A-202ENST00000596708 OR5K3A6NET4 321 aa10.32□□□□□ -0.76
CHMP2A-202ENST00000596708 TLCD2A6NGC4 264 aa10.32□□□□□ -0.76
CHMP2A-202ENST00000596708 ARGFXA6NJG6 315 aa10.32□□□□□ -0.76
CHMP2A-202ENST00000596708 GPR39O43194 453 aa10.32□□□□□ -0.76
CHMP2A-202ENST00000596708 SCRG1O75711 98 aa10.32□□□□□ -0.76
CHMP2A-202ENST00000596708 AGFG2O95081 481 aa10.32□□□□□ -0.76
CHMP2A-202ENST00000596708 TPM3P06753 285 aa10.32□□□□□ -0.76
CHMP2A-202ENST00000596708 MTHFD1P11586 935 aaKnown RBP10.32□□□□□ -0.76
CHMP2A-202ENST00000596708 MSH3P20585 1137 aa10.32□□□□□ -0.76
CHMP2A-202ENST00000596708 AKT1P31749 480 aa10.32□□□□□ -0.76
CHMP2A-202ENST00000596708 CD68P34810 354 aaPredicted RBP10.32□□□□□ -0.76
CHMP2A-202ENST00000596708 CHRNA4P43681 627 aa10.32□□□□□ -0.76
CHMP2A-202ENST00000596708 HSD11B2P80365 405 aa10.32□□□□□ -0.76
CHMP2A-202ENST00000596708 DMPKQ09013 629 aa10.32□□□□□ -0.76
CHMP2A-202ENST00000596708 CHAF1BQ13112 559 aa10.32□□□□□ -0.76
CHMP2A-202ENST00000596708 TFDP2Q14188 446 aa10.32□□□□□ -0.76
CHMP2A-202ENST00000596708 GSE1Q14687 1217 aa10.32□□□□□ -0.76
CHMP2A-202ENST00000596708 GPR19Q15760 415 aa10.32□□□□□ -0.76
CHMP2A-202ENST00000596708 UGT8Q16880 541 aa10.32□□□□□ -0.76
CHMP2A-202ENST00000596708 ASTE1Q2TB18 679 aaPredicted RBP10.32□□□□□ -0.76
CHMP2A-202ENST00000596708 SIRPB2Q5JXA9 342 aa10.32□□□□□ -0.76
CHMP2A-202ENST00000596708 FNBP1LQ5T0N5 605 aa10.32□□□□□ -0.76
CHMP2A-202ENST00000596708 TMTC4Q5T4D3 741 aa10.32□□□□□ -0.76
CHMP2A-202ENST00000596708 GPRC6AQ5T6X5 926 aa10.32□□□□□ -0.76
CHMP2A-202ENST00000596708 FHL5Q5TD97 284 aa10.32□□□□□ -0.76
CHMP2A-202ENST00000596708 KDELC1Q6UW63 502 aa10.32□□□□□ -0.76
CHMP2A-202ENST00000596708 MFSD7Q6UXD7 560 aa10.32□□□□□ -0.76
CHMP2A-202ENST00000596708 DET1Q7L5Y6 550 aa10.32□□□□□ -0.76
CHMP2A-202ENST00000596708 SYVN1Q86TM6 617 aa10.32□□□□□ -0.76
CHMP2A-202ENST00000596708 OOSP2Q86WS3 158 aa10.32□□□□□ -0.76
CHMP2A-202ENST00000596708 KMT5CQ86Y97 462 aa10.32□□□□□ -0.76
CHMP2A-202ENST00000596708 TMEM126BQ8IUX1 230 aa10.32□□□□□ -0.76
CHMP2A-202ENST00000596708 RHOT2Q8IXI1 618 aa10.32□□□□□ -0.76
CHMP2A-202ENST00000596708 RHOT1Q8IXI2 618 aa10.32□□□□□ -0.76
CHMP2A-202ENST00000596708 BEND7Q8N7W2 519 aaPredicted RBP10.32□□□□□ -0.76
CHMP2A-202ENST00000596708 OR8K1Q8NGG5 319 aa10.32□□□□□ -0.76
CHMP2A-202ENST00000596708 CPT1CQ8TCG5 803 aa10.32□□□□□ -0.76
CHMP2A-202ENST00000596708 DTX3LQ8TDB6 740 aa10.32□□□□□ -0.76
CHMP2A-202ENST00000596708 C12orf66Q96MD2 445 aa10.32□□□□□ -0.76
CHMP2A-202ENST00000596708 PSMG3-AS1Q96PY0 264 aa10.32□□□□□ -0.76
CHMP2A-202ENST00000596708 INSM2Q96T92 566 aaPredicted RBP10.32□□□□□ -0.76
CHMP2A-202ENST00000596708 CD180Q99467 661 aa10.32□□□□□ -0.76
CHMP2A-202ENST00000596708 WWP1Q9H0M0 922 aa10.32□□□□□ -0.76
CHMP2A-202ENST00000596708 KCND1Q9NSA2 647 aa10.32□□□□□ -0.76
CHMP2A-202ENST00000596708 SOHLH2Q9NX45 425 aa10.32□□□□□ -0.76
CHMP2A-202ENST00000596708 IL17CQ9P0M4 197 aa10.32□□□□□ -0.76
CHMP2A-202ENST00000596708 FAM8A1Q9UBU6 413 aa10.32□□□□□ -0.76
CHMP2A-202ENST00000596708 HYOU1Q9Y4L1 999 aa10.32□□□□□ -0.76
CHMP2A-202ENST00000596708 DOCK10Q96BY6 2186 aa10.32□□□□□ -0.76
CHMP2A-202ENST00000596708 STX7O15400 261 aaKnown RBP10.31□□□□□ -0.76
CHMP2A-202ENST00000596708 SPOPO43791 374 aa10.31□□□□□ -0.76
CHMP2A-202ENST00000596708 CST8O60676 142 aa10.31□□□□□ -0.76
CHMP2A-202ENST00000596708 CPNE3O75131 537 aaKnown RBP10.31□□□□□ -0.76
CHMP2A-202ENST00000596708 ZBTB11O95625 1053 aaPredicted RBP10.31□□□□□ -0.76
CHMP2A-202ENST00000596708 EPOP01588 193 aa10.31□□□□□ -0.76
CHMP2A-202ENST00000596708 KLK3P07288 261 aaPredicted RBP10.31□□□□□ -0.76
CHMP2A-202ENST00000596708 GNLYP22749 145 aa10.31□□□□□ -0.76
CHMP2A-202ENST00000596708 CA5AP35218 305 aa10.31□□□□□ -0.76
CHMP2A-202ENST00000596708 SLC1A1P43005 524 aa10.31□□□□□ -0.76
CHMP2A-202ENST00000596708 UQCRFS1P47985 274 aa10.31□□□□□ -0.76
CHMP2A-202ENST00000596708 ARCN1P48444 511 aaKnown RBP10.31□□□□□ -0.76
CHMP2A-202ENST00000596708 NR2C2P49116 596 aa10.31□□□□□ -0.76
CHMP2A-202ENST00000596708 PGDP52209 483 aa10.31□□□□□ -0.76
CHMP2A-202ENST00000596708 TUBB4BP68371 445 aa10.31□□□□□ -0.76
CHMP2A-202ENST00000596708 WASHC5Q12768 1159 aa10.31□□□□□ -0.76
CHMP2A-202ENST00000596708 TUBB2AQ13885 445 aa10.31□□□□□ -0.76
CHMP2A-202ENST00000596708 KRT33BQ14525 404 aa10.31□□□□□ -0.76
CHMP2A-202ENST00000596708 PRKD1Q15139 912 aaPredicted RBP10.31□□□□□ -0.76
CHMP2A-202ENST00000596708 SLC1A5Q15758 541 aa10.31□□□□□ -0.76
CHMP2A-202ENST00000596708 LONRF2Q1L5Z9 754 aa10.31□□□□□ -0.76
CHMP2A-202ENST00000596708 LRRC38Q5VT99 294 aa10.31□□□□□ -0.76
CHMP2A-202ENST00000596708 METRNLQ641Q3 311 aa10.31□□□□□ -0.76
CHMP2A-202ENST00000596708 CPZQ66K79 652 aa10.31□□□□□ -0.76
CHMP2A-202ENST00000596708 DUS1LQ6P1R4 473 aaKnown RBP10.31□□□□□ -0.76
CHMP2A-202ENST00000596708 FBXO38Q6PIJ6 1188 aa10.31□□□□□ -0.76
CHMP2A-202ENST00000596708 ZC3H18Q86VM9 953 aaKnown RBP10.31□□□□□ -0.76
CHMP2A-202ENST00000596708 D2HGDHQ8N465 521 aa10.31□□□□□ -0.76
CHMP2A-202ENST00000596708 DDHD1Q8NEL9 900 aa10.31□□□□□ -0.76
CHMP2A-202ENST00000596708 IPMKQ8NFU5 416 aa10.31□□□□□ -0.76
CHMP2A-202ENST00000596708 ZNF398Q8TD17 642 aa10.31□□□□□ -0.76
CHMP2A-202ENST00000596708 P3H4Q92791 437 aa10.31□□□□□ -0.76
CHMP2A-202ENST00000596708 MRGPRX2Q96LB1 330 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms