RNA–Protein interactions for RNA: ENST00000590180.1

TPM4-212, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-212ENST00000590180 OR6P1Q8NGX9 317 aa11.84□□□□□ -0.51
TPM4-212ENST00000590180 OR2L2Q8NH16 312 aa11.84□□□□□ -0.51
TPM4-212ENST00000590180 HDAC10Q969S8 669 aa11.84□□□□□ -0.51
TPM4-212ENST00000590180 MAGOHBQ96A72 148 aaKnown RBP11.84□□□□□ -0.51
TPM4-212ENST00000590180 MS4A14Q96JA4 679 aa11.84□□□□□ -0.51
TPM4-212ENST00000590180 TAAR9Q96RI9 348 aa11.84□□□□□ -0.51
TPM4-212ENST00000590180 INSM2Q96T92 566 aaPredicted RBP11.84□□□□□ -0.51
TPM4-212ENST00000590180 CASS4Q9NQ75 786 aa11.84□□□□□ -0.51
TPM4-212ENST00000590180 IMP3Q9NV31 184 aaKnown RBP11.84□□□□□ -0.51
TPM4-212ENST00000590180 OCIAD1Q9NX40 245 aa11.84□□□□□ -0.51
TPM4-212ENST00000590180 SLC39A1Q9NY26 324 aa11.84□□□□□ -0.51
TPM4-212ENST00000590180 SMARCAL1Q9NZC9 954 aa11.84□□□□□ -0.51
TPM4-212ENST00000590180 PDP2Q9P2J9 529 aa11.84□□□□□ -0.51
TPM4-212ENST00000590180 CFAP20Q9Y6A4 193 aaKnown RBP11.84□□□□□ -0.51
TPM4-212ENST00000590180 COL27A1Q8IZC6 1860 aaPredicted RBP11.83□□□□□ -0.52
TPM4-212ENST00000590180 KLHL33A6NCF5 533 aa11.83□□□□□ -0.52
TPM4-212ENST00000590180 OR51F1A6NGY5 319 aa11.83□□□□□ -0.52
TPM4-212ENST00000590180 CAPN5O15484 640 aaPredicted RBP11.83□□□□□ -0.52
TPM4-212ENST00000590180 KIF5CO60282 957 aa11.83□□□□□ -0.52
TPM4-212ENST00000590180 MSNP26038 577 aaKnown RBP11.83□□□□□ -0.52
TPM4-212ENST00000590180 ACRV1P26436 265 aa11.83□□□□□ -0.52
TPM4-212ENST00000590180 VPS41P49754 854 aa11.83□□□□□ -0.52
TPM4-212ENST00000590180 GPR18Q14330 331 aa11.83□□□□□ -0.52
TPM4-212ENST00000590180 TSTD2Q5T7W7 516 aa11.83□□□□□ -0.52
TPM4-212ENST00000590180 ZNF449Q6P9G9 518 aa11.83□□□□□ -0.52
TPM4-212ENST00000590180 NLRP9Q7RTR0 991 aa11.83□□□□□ -0.52
TPM4-212ENST00000590180 PIANPQ8IYJ0 282 aa11.83□□□□□ -0.52
TPM4-212ENST00000590180 SLC35F6Q8N357 371 aa11.83□□□□□ -0.52
TPM4-212ENST00000590180 PRELID2Q8N945 189 aa11.83□□□□□ -0.52
TPM4-212ENST00000590180 PPHLN1Q8NEY8 458 aaKnown RBP11.83□□□□□ -0.52
TPM4-212ENST00000590180 JPH3Q8WXH2 748 aaPredicted RBP11.83□□□□□ -0.52
TPM4-212ENST00000590180 ART4Q93070 314 aa11.83□□□□□ -0.52
TPM4-212ENST00000590180 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.83□□□□□ -0.52
TPM4-212ENST00000590180 LINC00615Q96LM1 132 aaPredicted RBP11.83□□□□□ -0.52
TPM4-212ENST00000590180 C12orf66Q96MD2 445 aa11.83□□□□□ -0.52
TPM4-212ENST00000590180 TGM7Q96PF1 710 aa11.83□□□□□ -0.52
TPM4-212ENST00000590180 TTC1Q99614 292 aa11.83□□□□□ -0.52
TPM4-212ENST00000590180 CCM2Q9BSQ5 444 aa11.83□□□□□ -0.52
TPM4-212ENST00000590180 AP1M1Q9BXS5 423 aa11.83□□□□□ -0.52
TPM4-212ENST00000590180 FOXJ2Q9P0K8 574 aa11.83□□□□□ -0.52
TPM4-212ENST00000590180 SLC2A6Q9UGQ3 507 aa11.83□□□□□ -0.52
TPM4-212ENST00000590180 PCDHB11Q9Y5F2 797 aa11.83□□□□□ -0.52
TPM4-212ENST00000590180 SCN8AQ9UQD0 1980 aa11.83□□□□□ -0.52
TPM4-212ENST00000590180 CACNA1GO43497 2377 aa11.83□□□□□ -0.52
TPM4-212ENST00000590180 TRBV5-4A0A0C4DH59 114 aa11.82□□□□□ -0.52
TPM4-212ENST00000590180 C9orf172C9J069 976 aa11.82□□□□□ -0.52
TPM4-212ENST00000590180 SGTAO43765 313 aa11.82□□□□□ -0.52
TPM4-212ENST00000590180 RASSF9O75901 435 aa11.82□□□□□ -0.52
TPM4-212ENST00000590180 GOT2P00505 430 aaKnown RBP11.82□□□□□ -0.52
TPM4-212ENST00000590180 KRT14P02533 472 aa11.82□□□□□ -0.52
TPM4-212ENST00000590180 SLC35G4P0C7Q5 338 aa11.82□□□□□ -0.52
TPM4-212ENST00000590180 MTHFD1P11586 935 aaKnown RBP11.82□□□□□ -0.52
TPM4-212ENST00000590180 NPY2RP49146 381 aa11.82□□□□□ -0.52
TPM4-212ENST00000590180 PRLHRP49683 370 aa11.82□□□□□ -0.52
TPM4-212ENST00000590180 SEPHS1P49903 392 aa11.82□□□□□ -0.52
TPM4-212ENST00000590180 UCNP55089 124 aa11.82□□□□□ -0.52
TPM4-212ENST00000590180 GFERP55789 205 aa11.82□□□□□ -0.52
TPM4-212ENST00000590180 TMPRSS3P57727 454 aa11.82□□□□□ -0.52
TPM4-212ENST00000590180 PRAMEP78395 509 aa11.82□□□□□ -0.52
TPM4-212ENST00000590180 CLN3Q13286 438 aa11.82□□□□□ -0.52
TPM4-212ENST00000590180 PLCL1Q15111 1095 aa11.82□□□□□ -0.52
TPM4-212ENST00000590180 TGIF1Q15583 401 aa11.82□□□□□ -0.52
TPM4-212ENST00000590180 DBN1Q16643 649 aa11.82□□□□□ -0.52
TPM4-212ENST00000590180 PCID2Q5JVF3 399 aa11.82□□□□□ -0.52
TPM4-212ENST00000590180 ARHGAP40Q5TG30 622 aa11.82□□□□□ -0.52
TPM4-212ENST00000590180 IRGCQ6NXR0 463 aa11.82□□□□□ -0.52
TPM4-212ENST00000590180 GPR155Q7Z3F1 870 aa11.82□□□□□ -0.52
TPM4-212ENST00000590180 ARHGAP22Q7Z5H3 698 aa11.82□□□□□ -0.52
TPM4-212ENST00000590180 LILRA3Q8N6C8 439 aaPredicted RBP11.82□□□□□ -0.52
TPM4-212ENST00000590180 CLDN19Q8N6F1 224 aa11.82□□□□□ -0.52
TPM4-212ENST00000590180 SPDYE1Q8NFV5 336 aaPredicted RBP11.82□□□□□ -0.52
TPM4-212ENST00000590180 OR4L1Q8NH43 312 aa11.82□□□□□ -0.52
TPM4-212ENST00000590180 ZDHHC12Q96GR4 267 aa11.82□□□□□ -0.52
TPM4-212ENST00000590180 FCRL3Q96P31 734 aaPredicted RBP11.82□□□□□ -0.52
TPM4-212ENST00000590180 RANBP9Q96S59 729 aa11.82□□□□□ -0.52
TPM4-212ENST00000590180 NAP1L3Q99457 506 aaPredicted RBP11.82□□□□□ -0.52
TPM4-212ENST00000590180 KCNF1Q9H3M0 494 aa11.82□□□□□ -0.52
TPM4-212ENST00000590180 PRORYQ9H606 182 aa11.82□□□□□ -0.52
TPM4-212ENST00000590180 VPS37BQ9H9H4 285 aa11.82□□□□□ -0.52
TPM4-212ENST00000590180 CPNE5Q9HCH3 593 aa11.82□□□□□ -0.52
TPM4-212ENST00000590180 CHRAC1Q9NRG0 131 aa11.82□□□□□ -0.52
TPM4-212ENST00000590180 BFARQ9NZS9 450 aa11.82□□□□□ -0.52
TPM4-212ENST00000590180 OGFRQ9NZT2 677 aa11.82□□□□□ -0.52
TPM4-212ENST00000590180 TTC7AQ9ULT0 858 aaPredicted RBP11.82□□□□□ -0.52
TPM4-212ENST00000590180 COLEC10Q9Y6Z7 277 aa11.82□□□□□ -0.52
TPM4-212ENST00000590180 IGLV3-16A0A075B6K0 115 aa11.81□□□□□ -0.52
TPM4-212ENST00000590180 C17orf113A0A1B0GUU1 675 aa11.81□□□□□ -0.52
TPM4-212ENST00000590180 B4E171 279 aa11.81□□□□□ -0.52
TPM4-212ENST00000590180 AP3B1O00203 1094 aa11.81□□□□□ -0.52
TPM4-212ENST00000590180 AP2A2O94973 939 aa11.81□□□□□ -0.52
TPM4-212ENST00000590180 PSMA3P25788 255 aa11.81□□□□□ -0.52
TPM4-212ENST00000590180 TSPAN7P41732 249 aa11.81□□□□□ -0.52
TPM4-212ENST00000590180 NSG1P42857 185 aa11.81□□□□□ -0.52
TPM4-212ENST00000590180 LEPRP48357 1165 aaKnown RBP11.81□□□□□ -0.52
TPM4-212ENST00000590180 GPS1Q13098 491 aa11.81□□□□□ -0.52
TPM4-212ENST00000590180 ITIH4Q14624 930 aa11.81□□□□□ -0.52
TPM4-212ENST00000590180 FASTKD1Q53R41 847 aaKnown RBP11.81□□□□□ -0.52
TPM4-212ENST00000590180 DCAF12Q5T6F0 453 aa11.81□□□□□ -0.52
TPM4-212ENST00000590180 CACHD1Q5VU97 1274 aa11.81□□□□□ -0.52
TPM4-212ENST00000590180 LYPLAL1Q5VWZ2 237 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms