RNA–Protein interactions for RNA: ENST00000588483.1

TPM4-209, Transcript of tropomyosin 4, humanhuman

TSL 5

Gene TPM4, Length 801 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-209ENST00000588483 ARSDP51689 593 aa10.28□□□□□ -0.76
TPM4-209ENST00000588483 DRG2P55039 364 aaKnown RBP10.28□□□□□ -0.76
TPM4-209ENST00000588483 TMPRSS15P98073 1019 aa10.28□□□□□ -0.76
TPM4-209ENST00000588483 CCDC173Q0VFZ6 552 aa10.28□□□□□ -0.76
TPM4-209ENST00000588483 SEPT6Q14141 434 aa10.28□□□□□ -0.76
TPM4-209ENST00000588483 GPR18Q14330 331 aa10.28□□□□□ -0.76
TPM4-209ENST00000588483 TPSAB1Q15661 275 aa10.28□□□□□ -0.76
TPM4-209ENST00000588483 SEPT7Q16181 437 aaKnown RBP10.28□□□□□ -0.76
TPM4-209ENST00000588483 RPE65Q16518 533 aa10.28□□□□□ -0.76
TPM4-209ENST00000588483 TSTD2Q5T7W7 516 aa10.28□□□□□ -0.76
TPM4-209ENST00000588483 CAPRIN2Q6IMN6 1127 aaKnown RBP10.28□□□□□ -0.76
TPM4-209ENST00000588483 C19orf48Q6RUI8 117 aa10.28□□□□□ -0.76
TPM4-209ENST00000588483 PRUNE1Q86TP1 453 aa10.28□□□□□ -0.76
TPM4-209ENST00000588483 SERPINA9Q86WD7 417 aa10.28□□□□□ -0.76
TPM4-209ENST00000588483 DTX1Q86Y01 620 aa10.28□□□□□ -0.76
TPM4-209ENST00000588483 PLXDC1Q8IUK5 500 aa10.28□□□□□ -0.76
TPM4-209ENST00000588483 TRIM48Q8IWZ4 208 aa10.28□□□□□ -0.76
TPM4-209ENST00000588483 DNAAF3Q8N9W5 541 aa10.28□□□□□ -0.76
TPM4-209ENST00000588483 RCBTB1Q8NDN9 531 aa10.28□□□□□ -0.76
TPM4-209ENST00000588483 HM13Q8TCT9 377 aa10.28□□□□□ -0.76
TPM4-209ENST00000588483 CXorf40BQ96DE9 158 aa10.28□□□□□ -0.76
TPM4-209ENST00000588483 DCUN1D1Q96GG9 259 aa10.28□□□□□ -0.76
TPM4-209ENST00000588483 NAP1L3Q99457 506 aaPredicted RBP10.28□□□□□ -0.76
TPM4-209ENST00000588483 DDA1Q9BW61 102 aa10.28□□□□□ -0.76
TPM4-209ENST00000588483 TBC1D10AQ9BXI6 508 aa10.28□□□□□ -0.76
TPM4-209ENST00000588483 PIH1D1Q9NWS0 290 aaKnown RBP10.28□□□□□ -0.76
TPM4-209ENST00000588483 SEMA5BQ9P283 1151 aa10.28□□□□□ -0.76
TPM4-209ENST00000588483 PISDQ9UG56 409 aa10.28□□□□□ -0.76
TPM4-209ENST00000588483 TCAF1Q9Y4C2 921 aa10.28□□□□□ -0.76
TPM4-209ENST00000588483 KALRNO60229 2985 aa10.28□□□□□ -0.76
TPM4-209ENST00000588483 PRAMEF33A0A0G2JMD5 474 aa10.27□□□□□ -0.77
TPM4-209ENST00000588483 QSOX1O00391 747 aa10.27□□□□□ -0.77
TPM4-209ENST00000588483 PRAMEF10O60809 474 aa10.27□□□□□ -0.77
TPM4-209ENST00000588483 ZSCAN5DPP0CG00 497 aa10.27□□□□□ -0.77
TPM4-209ENST00000588483 LIPCP11150 499 aa10.27□□□□□ -0.77
TPM4-209ENST00000588483 FGF3P11487 239 aaPredicted RBP10.27□□□□□ -0.77
TPM4-209ENST00000588483 MTHFD1P11586 935 aaKnown RBP10.27□□□□□ -0.77
TPM4-209ENST00000588483 MSNP26038 577 aaKnown RBP10.27□□□□□ -0.77
TPM4-209ENST00000588483 CSTF2P33240 577 aaKnown RBP eCLIP10.27□□□□□ -0.77
TPM4-209ENST00000588483 NSG1P42857 185 aa10.27□□□□□ -0.77
TPM4-209ENST00000588483 KCNJ1P48048 391 aa10.27□□□□□ -0.77
TPM4-209ENST00000588483 CDKN1CP49918 316 aaPredicted RBP10.27□□□□□ -0.77
TPM4-209ENST00000588483 RAB15P59190 212 aa10.27□□□□□ -0.77
TPM4-209ENST00000588483 RPA4Q13156 261 aa10.27□□□□□ -0.77
TPM4-209ENST00000588483 CLN3Q13286 438 aa10.27□□□□□ -0.77
TPM4-209ENST00000588483 DBN1Q16643 649 aa10.27□□□□□ -0.77
TPM4-209ENST00000588483 ZRANB3Q5FWF4 1079 aa10.27□□□□□ -0.77
TPM4-209ENST00000588483 LYPLAL1Q5VWZ2 237 aa10.27□□□□□ -0.77
TPM4-209ENST00000588483 FOXR1Q6PIV2 292 aa10.27□□□□□ -0.77
TPM4-209ENST00000588483 AFTPHQ6ULP2 937 aa10.27□□□□□ -0.77
TPM4-209ENST00000588483 CERS6Q6ZMG9 384 aa10.27□□□□□ -0.77
TPM4-209ENST00000588483 PPP1R21Q6ZMI0 780 aa10.27□□□□□ -0.77
TPM4-209ENST00000588483 ZNF534Q76KX8 674 aa10.27□□□□□ -0.77
TPM4-209ENST00000588483 DET1Q7L5Y6 550 aa10.27□□□□□ -0.77
TPM4-209ENST00000588483 PRSS42Q7Z5A4 293 aa10.27□□□□□ -0.77
TPM4-209ENST00000588483 PDZD3Q86UT5 571 aa10.27□□□□□ -0.77
TPM4-209ENST00000588483 TAB3Q8N5C8 712 aaPredicted RBP10.27□□□□□ -0.77
TPM4-209ENST00000588483 GPR150Q8NGU9 434 aa10.27□□□□□ -0.77
TPM4-209ENST00000588483 ACTRT1Q8TDG2 376 aa10.27□□□□□ -0.77
TPM4-209ENST00000588483 NCSTNQ92542 709 aa10.27□□□□□ -0.77
TPM4-209ENST00000588483 TAAR9Q96RI9 348 aa10.27□□□□□ -0.77
TPM4-209ENST00000588483 CCM2Q9BSQ5 444 aa10.27□□□□□ -0.77
TPM4-209ENST00000588483 IL22Q9GZX6 179 aa10.27□□□□□ -0.77
TPM4-209ENST00000588483 VPS37BQ9H9H4 285 aa10.27□□□□□ -0.77
TPM4-209ENST00000588483 SIDT1Q9NXL6 827 aaKnown RBP10.27□□□□□ -0.77
TPM4-209ENST00000588483 NEU2Q9Y3R4 380 aa10.27□□□□□ -0.77
TPM4-209ENST00000588483 BSNQ9UPA5 3926 aa10.27□□□□□ -0.77
TPM4-209ENST00000588483 CCDC162PA2VCL2 907 aa10.26□□□□□ -0.77
TPM4-209ENST00000588483 PGRMC1O00264 195 aaKnown RBP10.26□□□□□ -0.77
TPM4-209ENST00000588483 PRSS56P0CW18 603 aa10.26□□□□□ -0.77
TPM4-209ENST00000588483 CCL4P13236 92 aa10.26□□□□□ -0.77
TPM4-209ENST00000588483 NDUFS1P28331 727 aa10.26□□□□□ -0.77
TPM4-209ENST00000588483 CD151P48509 253 aa10.26□□□□□ -0.77
TPM4-209ENST00000588483 LMAN1P49257 510 aa10.26□□□□□ -0.77
TPM4-209ENST00000588483 TMPRSS3P57727 454 aa10.26□□□□□ -0.77
TPM4-209ENST00000588483 MC2RQ01718 297 aa10.26□□□□□ -0.77
TPM4-209ENST00000588483 KCNJ11Q14654 390 aa10.26□□□□□ -0.77
TPM4-209ENST00000588483 CCDC38Q502W7 563 aa10.26□□□□□ -0.77
TPM4-209ENST00000588483 PCID2Q5JVF3 399 aa10.26□□□□□ -0.77
TPM4-209ENST00000588483 TMEM164Q5U3C3 297 aa10.26□□□□□ -0.77
TPM4-209ENST00000588483 BROXQ5VW32 411 aa10.26□□□□□ -0.77
TPM4-209ENST00000588483 TTC27Q6P3X3 843 aa10.26□□□□□ -0.77
TPM4-209ENST00000588483 LRRC8BQ6P9F7 803 aa10.26□□□□□ -0.77
TPM4-209ENST00000588483 SLC35F6Q8N357 371 aa10.26□□□□□ -0.77
TPM4-209ENST00000588483 RSC1A1Q92681 617 aa10.26□□□□□ -0.77
TPM4-209ENST00000588483 USP7Q93009 1102 aa10.26□□□□□ -0.77
TPM4-209ENST00000588483 C9orf72Q96LT7 481 aa10.26□□□□□ -0.77
TPM4-209ENST00000588483 RMDN2Q96LZ7 410 aa10.26□□□□□ -0.77
TPM4-209ENST00000588483 ZNF778Q96MU6 729 aa10.26□□□□□ -0.77
TPM4-209ENST00000588483 TEFMQ96QE5 360 aaKnown RBP10.26□□□□□ -0.77
TPM4-209ENST00000588483 OSBPL9Q96SU4 736 aa10.26□□□□□ -0.77
TPM4-209ENST00000588483 INSM2Q96T92 566 aaPredicted RBP10.26□□□□□ -0.77
TPM4-209ENST00000588483 ZPBPQ9BS86 351 aa10.26□□□□□ -0.77
TPM4-209ENST00000588483 ASPSCR1Q9BZE9 553 aa10.26□□□□□ -0.77
TPM4-209ENST00000588483 OR52A5Q9H2C5 316 aa10.26□□□□□ -0.77
TPM4-209ENST00000588483 ZNF768Q9H5H4 540 aaKnown RBP10.26□□□□□ -0.77
TPM4-209ENST00000588483 FAM96AQ9H5X1 160 aa10.26□□□□□ -0.77
TPM4-209ENST00000588483 KIR3DX1Q9H7L2 352 aa10.26□□□□□ -0.77
TPM4-209ENST00000588483 COG4Q9H9E3 785 aa10.26□□□□□ -0.77
TPM4-209ENST00000588483 MRM3Q9HC36 420 aaKnown RBP10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms