RNA–Protein interactions for RNA: ENST00000588472.6

SDF2-207, Transcript of stromal cell derived factor 2, humanhuman

TSL 2

Gene SDF2, Length 681 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-207ENST00000588472 FOXJ2Q9P0K8 574 aa8.68□□□□□ -1.02
SDF2-207ENST00000588472 IGSF10Q6WRI0 2623 aa8.68□□□□□ -1.02
SDF2-207ENST00000588472 SETXQ7Z333 2677 aaKnown RBP8.68□□□□□ -1.02
SDF2-207ENST00000588472 ASH1LQ9NR48 2969 aaKnown RBP8.68□□□□□ -1.02
SDF2-207ENST00000588472 CCDC162PA2VCL2 907 aa8.67□□□□□ -1.02
SDF2-207ENST00000588472 MGAT4DA6NG13 374 aa8.67□□□□□ -1.02
SDF2-207ENST00000588472 CFAP99D6REC4 459 aa8.67□□□□□ -1.02
SDF2-207ENST00000588472 NVLO15381 856 aaKnown RBP8.67□□□□□ -1.02
SDF2-207ENST00000588472 SLC35G4P0C7Q5 338 aa8.67□□□□□ -1.02
SDF2-207ENST00000588472 ATP1B2P14415 290 aaPredicted RBP8.67□□□□□ -1.02
SDF2-207ENST00000588472 MSNP26038 577 aaKnown RBP8.67□□□□□ -1.02
SDF2-207ENST00000588472 SEPHS1P49903 392 aa8.67□□□□□ -1.02
SDF2-207ENST00000588472 ARSDP51689 593 aa8.67□□□□□ -1.02
SDF2-207ENST00000588472 GFERP55789 205 aa8.67□□□□□ -1.02
SDF2-207ENST00000588472 TMPRSS3P57727 454 aa8.67□□□□□ -1.02
SDF2-207ENST00000588472 SESN2P58004 480 aaPredicted RBP8.67□□□□□ -1.02
SDF2-207ENST00000588472 BASP1P80723 227 aaKnown RBP8.67□□□□□ -1.02
SDF2-207ENST00000588472 CDH17Q12864 832 aa8.67□□□□□ -1.02
SDF2-207ENST00000588472 SRSF6Q13247 344 aaKnown RBP8.67□□□□□ -1.02
SDF2-207ENST00000588472 CLN3Q13286 438 aa8.67□□□□□ -1.02
SDF2-207ENST00000588472 SQSTM1Q13501 440 aa8.67□□□□□ -1.02
SDF2-207ENST00000588472 TRA2AQ13595 282 aaKnown RBP eCLIP8.67□□□□□ -1.02
SDF2-207ENST00000588472 BRD3Q15059 726 aa8.67□□□□□ -1.02
SDF2-207ENST00000588472 CLPPQ16740 277 aaPredicted RBP8.67□□□□□ -1.02
SDF2-207ENST00000588472 SKIDA1Q1XH10 827 aa8.67□□□□□ -1.02
SDF2-207ENST00000588472 AGAP9Q5VTM2 703 aa8.67□□□□□ -1.02
SDF2-207ENST00000588472 IRGCQ6NXR0 463 aa8.67□□□□□ -1.02
SDF2-207ENST00000588472 WDR74Q6RFH5 385 aaPredicted RBP8.67□□□□□ -1.02
SDF2-207ENST00000588472 FAM92BQ6ZTR7 304 aa8.67□□□□□ -1.02
SDF2-207ENST00000588472 VASH2Q86V25 355 aa8.67□□□□□ -1.02
SDF2-207ENST00000588472 PLXDC1Q8IUK5 500 aa8.67□□□□□ -1.02
SDF2-207ENST00000588472 KLHDC8BQ8IXV7 354 aa8.67□□□□□ -1.02
SDF2-207ENST00000588472 PIANPQ8IYJ0 282 aa8.67□□□□□ -1.02
SDF2-207ENST00000588472 LILRA3Q8N6C8 439 aaPredicted RBP8.67□□□□□ -1.02
SDF2-207ENST00000588472 CLDN19Q8N6F1 224 aa8.67□□□□□ -1.02
SDF2-207ENST00000588472 AVL9Q8NBF6 648 aa8.67□□□□□ -1.02
SDF2-207ENST00000588472 SPDYE1Q8NFV5 336 aaPredicted RBP8.67□□□□□ -1.02
SDF2-207ENST00000588472 GPR150Q8NGU9 434 aa8.67□□□□□ -1.02
SDF2-207ENST00000588472 OR6P1Q8NGX9 317 aa8.67□□□□□ -1.02
SDF2-207ENST00000588472 OR2L2Q8NH16 312 aa8.67□□□□□ -1.02
SDF2-207ENST00000588472 STYXQ8WUJ0 223 aa8.67□□□□□ -1.02
SDF2-207ENST00000588472 UBE2Q2Q8WVN8 375 aa8.67□□□□□ -1.02
SDF2-207ENST00000588472 MAIP1Q8WWC4 291 aa8.67□□□□□ -1.02
SDF2-207ENST00000588472 HDAC10Q969S8 669 aa8.67□□□□□ -1.02
SDF2-207ENST00000588472 ZNF514Q96K75 400 aaPredicted RBP8.67□□□□□ -1.02
SDF2-207ENST00000588472 C12orf66Q96MD2 445 aa8.67□□□□□ -1.02
SDF2-207ENST00000588472 TAAR9Q96RI9 348 aa8.67□□□□□ -1.02
SDF2-207ENST00000588472 DPYSL5Q9BPU6 564 aa8.67□□□□□ -1.02
SDF2-207ENST00000588472 AP1M1Q9BXS5 423 aa8.67□□□□□ -1.02
SDF2-207ENST00000588472 SLC40A1Q9NP59 571 aa8.67□□□□□ -1.02
SDF2-207ENST00000588472 ZDHHC3Q9NYG2 299 aa8.67□□□□□ -1.02
SDF2-207ENST00000588472 OGFRQ9NZT2 677 aa8.67□□□□□ -1.02
SDF2-207ENST00000588472 PAK5Q9P286 719 aa8.67□□□□□ -1.02
SDF2-207ENST00000588472 SLC2A6Q9UGQ3 507 aa8.67□□□□□ -1.02
SDF2-207ENST00000588472 TTC7AQ9ULT0 858 aaPredicted RBP8.67□□□□□ -1.02
SDF2-207ENST00000588472 PCDHB11Q9Y5F2 797 aa8.67□□□□□ -1.02
SDF2-207ENST00000588472 DNMT3AQ9Y6K1 912 aaPredicted RBP8.67□□□□□ -1.02
SDF2-207ENST00000588472 FLNBO75369 2602 aaKnown RBP8.67□□□□□ -1.02
SDF2-207ENST00000588472 MROH6A6NGR9 719 aa8.66□□□□□ -1.02
SDF2-207ENST00000588472 LILRA5A6NI73 299 aa8.66□□□□□ -1.02
SDF2-207ENST00000588472 PRR19A6NJB7 356 aa8.66□□□□□ -1.02
SDF2-207ENST00000588472 ERI2A8K979 691 aaKnown RBP8.66□□□□□ -1.02
SDF2-207ENST00000588472 HGSO14964 777 aaPredicted RBP8.66□□□□□ -1.02
SDF2-207ENST00000588472 CAPN5O15484 640 aaPredicted RBP8.66□□□□□ -1.02
SDF2-207ENST00000588472 SGTAO43765 313 aa8.66□□□□□ -1.02
SDF2-207ENST00000588472 KIF1CO43896 1103 aaKnown RBP8.66□□□□□ -1.02
SDF2-207ENST00000588472 KCNJ13O60928 360 aa8.66□□□□□ -1.02
SDF2-207ENST00000588472 ITGB6P18564 788 aa8.66□□□□□ -1.02
SDF2-207ENST00000588472 ACRV1P26436 265 aa8.66□□□□□ -1.02
SDF2-207ENST00000588472 MLLT3P42568 568 aaPredicted RBP8.66□□□□□ -1.02
SDF2-207ENST00000588472 LEPRP48357 1165 aaKnown RBP8.66□□□□□ -1.02
SDF2-207ENST00000588472 ARCN1P48444 511 aaKnown RBP8.66□□□□□ -1.02
SDF2-207ENST00000588472 EPHA4P54764 986 aa8.66□□□□□ -1.02
SDF2-207ENST00000588472 PPP1CAP62136 330 aa8.66□□□□□ -1.02
SDF2-207ENST00000588472 CRADDP78560 199 aa8.66□□□□□ -1.02
SDF2-207ENST00000588472 CACNG1Q06432 222 aa8.66□□□□□ -1.02
SDF2-207ENST00000588472 FOXM1Q08050 763 aa8.66□□□□□ -1.02
SDF2-207ENST00000588472 DMPKQ09013 629 aa8.66□□□□□ -1.02
SDF2-207ENST00000588472 SEMA5AQ13591 1074 aa8.66□□□□□ -1.02
SDF2-207ENST00000588472 DBN1Q16643 649 aa8.66□□□□□ -1.02
SDF2-207ENST00000588472 GPR33Q49SQ1 333 aa8.66□□□□□ -1.02
SDF2-207ENST00000588472 TAF1BQ53T94 588 aaPredicted RBP8.66□□□□□ -1.02
SDF2-207ENST00000588472 MANEAQ5SRI9 462 aa8.66□□□□□ -1.02
SDF2-207ENST00000588472 DCAF12Q5T6F0 453 aa8.66□□□□□ -1.02
SDF2-207ENST00000588472 METRNLQ641Q3 311 aa8.66□□□□□ -1.02
SDF2-207ENST00000588472 ANKS6Q68DC2 871 aa8.66□□□□□ -1.02
SDF2-207ENST00000588472 WASH2PQ6VEQ5 465 aa8.66□□□□□ -1.02
SDF2-207ENST00000588472 NAPRTQ6XQN6 538 aa8.66□□□□□ -1.02
SDF2-207ENST00000588472 CCDC81Q6ZN84 652 aa8.66□□□□□ -1.02
SDF2-207ENST00000588472 SLC35F6Q8N357 371 aa8.66□□□□□ -1.02
SDF2-207ENST00000588472 HEXDCQ8WVB3 486 aa8.66□□□□□ -1.02
SDF2-207ENST00000588472 RSC1A1Q92681 617 aa8.66□□□□□ -1.02
SDF2-207ENST00000588472 ANP32BQ92688 251 aaKnown RBP8.66□□□□□ -1.02
SDF2-207ENST00000588472 ELMO2Q96JJ3 720 aa8.66□□□□□ -1.02
SDF2-207ENST00000588472 C9orf72Q96LT7 481 aa8.66□□□□□ -1.02
SDF2-207ENST00000588472 ZNF778Q96MU6 729 aa8.66□□□□□ -1.02
SDF2-207ENST00000588472 FERD3LQ96RJ6 166 aa8.66□□□□□ -1.02
SDF2-207ENST00000588472 CCNL2Q96S94 520 aaPredicted RBP8.66□□□□□ -1.02
SDF2-207ENST00000588472 INSM2Q96T92 566 aaPredicted RBP8.66□□□□□ -1.02
SDF2-207ENST00000588472 CCM2Q9BSQ5 444 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms